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Fabai Wu

@fabaiwu.bsky.social

Ass Prof of Microbiology at EITech Ningbo. www.microwulab.com

116 Followers  |  129 Following  |  28 Posts  |  Joined: 13.09.2023
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Posts by Fabai Wu (@fabaiwu.bsky.social)

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Asgard archaea: have we found our microbial ancestors? - The EMBO Journal The discovery of Asgard archaea about a decade ago has greatly reshaped our understanding of archaeal evolution and the origin of eukaryotes. Asgards are currently thought to be the closest prokaryoti...

Asgard archaea: have we found our microbial ancestors?
link.springer.com/article/10.1...

06.03.2026 06:37 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

dude, finally! Congrats!

06.03.2026 06:28 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

10 years of massive Asgard undertaking, masterly summarized!

06.03.2026 06:28 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Diversity, ecology, cell biology and evolution of the Asgard archaea - Nature Reviews Microbiology The Asgard archaea have become a cornerstone of archaeal research, particularly for studies aiming to unravel the origin and early evolution of eukaryotes. This Review outlines the current state of th...

Just over ten years after the discovery of the first Asgard archaeal genomes, we revisit the rapid expansion of this remarkable archaeal lineage. From diverse genomes and metabolisms to eukaryotic signature proteins and the first cultured representatives.
www.nature.com/articles/s41...

05.03.2026 10:26 β€” πŸ‘ 40    πŸ” 25    πŸ’¬ 3    πŸ“Œ 1
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Finally out in @natmicrobiol.nature.com: Prediction of eukaryotic cellular complexity in Asgard archaea using structural modelling. Great work by @stephkoe.bsky.social @kassipan.bsky.social @jvhooff.bsky.social

www.nature.com/articles/s41...

05.03.2026 10:07 β€” πŸ‘ 68    πŸ” 28    πŸ’¬ 1    πŸ“Œ 0

Prediction of eukaryotic cellular complexity in Asgard archaea using structural modelling

06.03.2026 06:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Congrats to all!

19.02.2026 03:38 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Oxygen metabolism in descendants of the archaeal-eukaryotic ancestor

19.02.2026 03:37 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Our latest preprint: Together with the team of Jan LΓΆwe, @danieltamarit.bsky.social and many others we discovered and characterized several Asgard tubulin genes and propose that microtubule architecture and dynamics evolved in Asgard archaea prior to eukaryogenesis
www.biorxiv.org/content/10.6...

16.02.2026 16:43 β€” πŸ‘ 134    πŸ” 61    πŸ’¬ 3    πŸ“Œ 4

cool work!

22.01.2026 15:03 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Cell cycle dysregulation of globally important SAR11 bacteria resulting from environmental perturbation - Nature Microbiology Without key cell cycle control genes, SAR11 cells experience aneuploidy and growth inhibition when exposed to changes in nutrients, carbon sources or temperature stress, a vulnerability that may repre...

Our latest. Led by the very talented @ahoiching.bsky.social

Cell cycle dysregulation of globally important SAR11 bacteria resulting from environmental perturbation www.nature.com/articles/s41... #jcampubs 🌊

22.01.2026 14:24 β€” πŸ‘ 52    πŸ” 33    πŸ’¬ 3    πŸ“Œ 3
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Dominant contribution of Asgard archaea to eukaryogenesis - Nature A survey of the reconstructed gene set of the last eukaryotic common ancestor shows a consistent link between Asgard archaea and the origin of numerous, functionally diverse eukaryotic genes, dem...

Dominant contribution of Asgard archaea to eukaryogenesis.

tldr; Best guess, ~ 50% of conserved eukaryotic protein families are from from Asgard archaea!

#science #biology #evolution #nature #bioinformatics

www.nature.com/articles/s41...

18.01.2026 14:24 β€” πŸ‘ 34    πŸ” 16    πŸ’¬ 2    πŸ“Œ 1
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New Issue Alert β€” mLife Vol. 4, Issue 6 is out!
The issue features 10 open-access papers spanning host–pathogen interactions, bacterial cell division, RNA editing, phage therapy, CRISPR optogenetics, and more.
Table of contents here πŸ‘‰
onlinelibrary.wiley.com/doi/10.1002/...
Highlights below ⬇️

04.01.2026 03:13 β€” πŸ‘ 5    πŸ” 4    πŸ’¬ 2    πŸ“Œ 1
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Join the IC-DLI x mLife Webinar on Deep Life Studies!
πŸ—“ Dec 30 | πŸ• 13:00 UTC | πŸ§ͺ 3 exciting talks on:
β€’ Deep-sea cold seep microbiomes
β€’ Novel methanogens beyond Euryarchaeota
β€’ Habitable rock–water systems
πŸ“Zoom ID: 853 4219 3531 | PW: 904477

29.12.2025 08:31 β€” πŸ‘ 2    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

Come to follow the official BlueSky of the journal #mLife!

18.12.2025 08:56 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Insightful Review in #mLife!
Emerging single-cell sequencing and imaging technologies now allow for the profiling of microbial heterogeneity with unprecedented resolutionβ€”capturing phenotypic and spatial diversity within microbial communities.
πŸ”— doi.org/10.1002/mlf2...

22.12.2025 02:52 β€” πŸ‘ 2    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0

amazing!

03.12.2025 07:32 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
microscopic pictures and 3D reconstructions of a microbial cell

microscopic pictures and 3D reconstructions of a microbial cell

Discovery of rare #protist reveals previously unknown branch of eukaryotic tree of life phys.org/news/2025-11...

Rare microbial relict sheds light on an ancient eukaryotic supergroup www.nature.com/articles/s41...

#Protists #Microbes #Evolution #Eukaryotes #TreeOfLife

23.11.2025 17:11 β€” πŸ‘ 20    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
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An archaeal genetic code with all TAG codons as pyrrolysine Multiple genetic codes developed during the evolution of eukaryotes and bacteria, yet no alternative genetic code is known for archaea. We used proteomics to confirm our prediction that certain archae...

An archaeal genetic code with all TAG codons as pyrrolysine www.science.org/doi/abs/10.1... #jcampubs

21.11.2025 16:20 β€” πŸ‘ 27    πŸ” 16    πŸ’¬ 2    πŸ“Œ 1
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An Asgard archaeon with internal membrane compartments

Brilliant study led by @fmacleod.bsky.social and Andriko von KΓΌgelgen. Tight collaboration with @buzzbaum.bsky.social and lab. Congrats to all authors!

www.biorxiv.org/content/10.1...

07.11.2025 10:44 β€” πŸ‘ 387    πŸ” 169    πŸ’¬ 10    πŸ“Œ 22

Congrats Brett & co!

11.11.2025 01:22 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Asgards everyday! Another boost to the metabolism at the prokaryote-eukaryote interface.

11.11.2025 01:22 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thanks Daan!

11.11.2025 01:18 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
home | GlobDB

I'm happy to announce the latest release of the GlobDB, available at globdb.org.

The GlobDB is a database of "species dereplicated" microbial genomes, and as of release 226 contains twice the number of species-representative genomes (306,260) than the latest GTDB release.

10.06.2025 11:20 β€” πŸ‘ 114    πŸ” 62    πŸ’¬ 3    πŸ“Œ 4
Isolation of retron-bearing hosts from environmental samples. Top: Schematic of the isolation of bacteria from soil and water samples and identification of possible retron-bearing hosts using PAGE analysis (from left). Retron RT-DNA bands from PAGE analyses. Overview of sampling, screening of colonies, and identification of retron hosts. Hosts displaying an RT-DNA band were subjected to whole-genome sequencing. RT-DNA was subjected to unbiased adapter addition and sequencing. Bottom: Top left panel: Schematic of canonical retron operon with components annotated, effector in pink, noncoding RNA (ncRNA) in orange, and reverse transcriptase in purple. Other seven panels: Seven putative retron operons, identifying the retron type, host species, and predicted two-dimensional structure of the ncRNA. For retrons where RT-DNA sequencing is available, sequencing coverage is plotted onto ncRNA in an orange heatmap (heatmap legend indicated number of sequencing reads mapped). Gene abbreviations: NDT (nucleoside deoxyribosyltransferase-like); PRTase (phosphoribosyltransferase); WH (winged helix-turn-helix DNA binding); HTH (helix-turn-helix domain containing); HipA (HipA-like); DUF (DUF3037 domain-containing protein).

Isolation of retron-bearing hosts from environmental samples. Top: Schematic of the isolation of bacteria from soil and water samples and identification of possible retron-bearing hosts using PAGE analysis (from left). Retron RT-DNA bands from PAGE analyses. Overview of sampling, screening of colonies, and identification of retron hosts. Hosts displaying an RT-DNA band were subjected to whole-genome sequencing. RT-DNA was subjected to unbiased adapter addition and sequencing. Bottom: Top left panel: Schematic of canonical retron operon with components annotated, effector in pink, noncoding RNA (ncRNA) in orange, and reverse transcriptase in purple. Other seven panels: Seven putative retron operons, identifying the retron type, host species, and predicted two-dimensional structure of the ncRNA. For retrons where RT-DNA sequencing is available, sequencing coverage is plotted onto ncRNA in an orange heatmap (heatmap legend indicated number of sequencing reads mapped). Gene abbreviations: NDT (nucleoside deoxyribosyltransferase-like); PRTase (phosphoribosyltransferase); WH (winged helix-turn-helix DNA binding); HTH (helix-turn-helix domain containing); HipA (HipA-like); DUF (DUF3037 domain-containing protein).

Bacteria rely on retrons for #phage defense, but most known systems come from clinical or lab strains. @seth-shipman.bsky.social &co identify diverse #retrons from environmental #bacteria, uncovering their defense mechanisms & using them as #GenomeEditing tools @plosbiology.org πŸ§ͺ plos.io/4oDqRAF

24.10.2025 12:58 β€” πŸ‘ 8    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

How are we replicating our #DNA? Find origin in the #Asgard #Archaea!

24.10.2025 12:43 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

chromosome replicationists – #Archaea branch, Asgard dept. – take note πŸ‘‡
#ArchaeaSky

thx @acritschristoph.bsky.social for boosting this πŸ™

21.10.2025 18:52 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

glad to be noticed by the mighty STC. big fan!

22.10.2025 07:39 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

yeah for sure! been a long time.

21.10.2025 16:10 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0