Sebastian Raubach's Avatar

Sebastian Raubach

@bazraubach.bsky.social

Bioinformatics Research Software Engineer. #rse #programming #videogames #photography #hillwalking #scotland #opensource #webdev https://sebastian-raubach.github.io/

174 Followers  |  171 Following  |  249 Posts  |  Joined: 28.08.2023  |  1.6089

Latest posts by bazraubach.bsky.social on Bluesky

And now there are different colours per selected item to make them easier to differentiate in the main display.

#gridscore #phenotyping #webdev #pgr

23.10.2025 08:52 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Here's a sneak-peek at one of the new features coming to #GridScore soon. You'll be able to highlight not just controls, but also specific reps and treatments as well as highlight search results based on names.

#webdev #phenotyping

22.10.2025 12:52 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 1
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It was a very moody morning today.
#photography #Scotland

20.10.2025 18:11 β€” πŸ‘ 12    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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What a beautiful day for a hike up Ben More on Mull.
Stunning scenery, but a pretty wet path after yesterday's rain.
#hiking #Scotland

28.09.2025 19:04 β€” πŸ‘ 6    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Some snapshots from Iona.
#Scotland #photography #dogsofbluesky

26.09.2025 15:24 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Frickl is a self-hosted photo library made with Vue by @bazraubach.bsky.social πŸ“Έ It helps you organize your photos and gives you an easy way to share them with family & friends! - madewithvuejs.com/frickl

16.09.2025 15:31 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Germinate - The generic plant genetic resources database

Find out more about Germinate at
germinate.hutton.ac.uk

14.08.2025 12:47 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Germinate will now prefer the 'display name' over the internal unique identifier when exporting or visualizing data. The 'display name' is set during import using the 'ACCENAME' field in the MCPD. If none is specified Germinate will automatically use 'ACCENUMB' as the display name.

5/6

14.08.2025 12:47 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Import status errors can now occur multiple times. Prevously each error type was only shown a single time to prevent huge lists of errors when thousands of issues are found in the input. Now some error types - those we don't expect to see in huge numbers - can be reported back multiple times.

4/6

14.08.2025 12:47 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Germinate Example

Germinate now supports QBMS (starting with QBMS v2.0.0), an R package used to interact with BrAPI data providers. Find out more on the QBMS Germinate page.

3/6

icarda.github.io/QBMS/article...

14.08.2025 12:47 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
A screenshot of an exemplar help output of the Germinate Command Line Interface. The command executed is `java -jar germinate-4.9.0.jar import genotype excel --help`. This shows the help information for the genotypic data import in Excel format.

A screenshot of an exemplar help output of the Germinate Command Line Interface. The command executed is `java -jar germinate-4.9.0.jar import genotype excel --help`. This shows the help information for the genotypic data import in Excel format.

Germinate now offers a complete command-line interface (CLI). Currently, this supports data import via the Germinate Data Templates. Please refer to the CLI documentation for more information.

2/6

germinateplatform.github.io/germinate-se...

14.08.2025 12:47 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
A banner image showing the Germinate logo and a QR code to the Germinate homepage on the left. The right hand side shows the "Germinate" tool name at the top with version number 4.9.0 below and the URL germinate.hutton.ac.uk at the bottom.

A banner image showing the Germinate logo and a QR code to the Germinate homepage on the left. The right hand side shows the "Germinate" tool name at the top with version number 4.9.0 below and the URL germinate.hutton.ac.uk at the bottom.

We've just released a new version of @germinate.hutton.ac.uk with lots of new features. Check them out in the thread 🧡:
#pgr #webdev #boldcwr #phenotyping

1/6

germinate.hutton.ac.uk

14.08.2025 12:47 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
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OSA is gonna make us lose access to fucking wikipedia

write to your MPs.

26.07.2025 20:53 β€” πŸ‘ 6279    πŸ” 4110    πŸ’¬ 90    πŸ“Œ 324

There's a realistic chance we get to a position where Wikipedia is blocked while official government accounts are posting on a site that created MechaHitler AI

27.07.2025 12:16 β€” πŸ‘ 1179    πŸ” 505    πŸ’¬ 20    πŸ“Œ 17
4-panel comic. (1) [Person 1 with ponytail flanked by person with short hair and another person speaking into microphone at podium] PERSON 1: In the early 2010s, researchers found that many major scientific results couldn’t be reproduced. (2) PERSON 1: Over a decade into the replication crisis, we wanted to see if today’s studies have become more robust. (3) PERSON 1: Unfortunately, our replication analysis has found exactly the same problems that those 2010s researchers did. (4) [newspaper with image of speakers from previous panels] Headline: Replication Crisis Solved

4-panel comic. (1) [Person 1 with ponytail flanked by person with short hair and another person speaking into microphone at podium] PERSON 1: In the early 2010s, researchers found that many major scientific results couldn’t be reproduced. (2) PERSON 1: Over a decade into the replication crisis, we wanted to see if today’s studies have become more robust. (3) PERSON 1: Unfortunately, our replication analysis has found exactly the same problems that those 2010s researchers did. (4) [newspaper with image of speakers from previous panels] Headline: Replication Crisis Solved

Replication Crisis

xkcd.com/3117/

21.07.2025 23:54 β€” πŸ‘ 4883    πŸ” 656    πŸ’¬ 28    πŸ“Œ 30
Head of Department- Information & Computational Science (ICS) - Flexible Aberdeen/Dundee We are looking for an outstanding scholar with excellent, interpersonal and leadership skills to lead our Information and Computational Sciences (ICS) department. The James Hutton Institute is an int...

Our Information & Computational Sciences dept. is looking for a new head at @hutton.ac.uk.
Interested in #bioinformatics, #geoinformatics, #soil science, #risk assessment and #modelling, as well as research #computing and high-performance computing?
#jobs
hutton.current-vacancies.com/Jobs/Advert/...

21.07.2025 12:54 β€” πŸ‘ 3    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0
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A couple of years ago while @bazraubach.bsky.social and myself were out at ICARDA in India we ended up being roped into helping write some text for a book which would be used to teach PGR - its been published now :-) link.springer.com/book/10.1007...

17.07.2025 08:17 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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UNICON is an open-source PWA made with Vue by @bazraubach.bsky.social‬ that helps you convert any unit to another πŸ”„ - madewithvuejs.com/unicon

16.07.2025 11:28 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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🌾Plotting the Future- Cereal walks are taking place tomorrow!

Join us for guided tours of our field plotsβ€”showcasing the breadth of research underway as part of the
@intbarleyhub.bsky.social programme.

πŸ“… 15 July | πŸ•Tours at: 1, 2 & 3pm |πŸ“Balruddery Farm

Register now🎟️: ow.ly/WXJE50Wp1gA

14.07.2025 09:18 β€” πŸ‘ 4    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Kaylee and Yuna

10.07.2025 19:58 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Some of the non-dog photos from yesterday.
#photography #Wales

09.07.2025 10:08 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Stunning hike up Yr Aran to the south of Snowdon today.
#photography #Wales #dogsofbluesky

08.07.2025 15:19 β€” πŸ‘ 21    πŸ” 1    πŸ’¬ 0    πŸ“Œ 1
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How are these two so cute???
#dogsofbluesky

07.07.2025 18:37 β€” πŸ‘ 6    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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First trip to Wales and what a beautiful place it is! We've been really lucky with the weather and the absence of midges make it so much more enjoyable than other trips we've done.
#photography #Wales

07.07.2025 16:40 β€” πŸ‘ 9    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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We hosted the 3rd Best Crop project AGM this week. A successful meeting, which included a field trip where delegates visited our plots, demonstrating the wide range of research projects as part of the International Barley Hub programme.
#bestcrop
#betterbarley

26.06.2025 13:48 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Yes, this seems like the perfect spot to sunbathe...
#dogsofbluesky #photography

22.06.2025 17:18 β€” πŸ‘ 9    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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There are two types of dogs...
#dogsofbluesky

16.06.2025 21:00 β€” πŸ‘ 5    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Beautiful view this morning.

#Scotland #photography

15.06.2025 12:43 β€” πŸ‘ 6    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
A line chart comparing life expectancy vs. health expenditure per capita from 1970 to 2022 across multiple countries. The y-axis shows life expectancy (60-85 years), x-axis shows health expenditure ($0-$10,000). Lines track each country's progress, with the United States notably showing high expenditure but lower life expectancy than peers like Japan and Switzerland. Countries are color-coded by continent. Source: Our World in Data

A line chart comparing life expectancy vs. health expenditure per capita from 1970 to 2022 across multiple countries. The y-axis shows life expectancy (60-85 years), x-axis shows health expenditure ($0-$10,000). Lines track each country's progress, with the United States notably showing high expenditure but lower life expectancy than peers like Japan and Switzerland. Countries are color-coded by continent. Source: Our World in Data

An unhealthy outlier...
ourworldindata.org/grapher/life...

14.06.2025 18:55 β€” πŸ‘ 14    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0
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Thanks to everyone who made @CerealsEvent 2025 day one so enjoyable and engaging. Bring on day two! #Cereals2025

11.06.2025 22:54 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

@bazraubach is following 20 prominent accounts