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Ellis Patrick

@ellispatrick.bsky.social

Statistical Bioinformagician with interests in cytometry and precision medicine. Associate Professor at the University of Sydney, Sydney Precision Data Science Centre, and Westmead Institute for Medical Research. https://ellispatrick.github.io/

613 Followers  |  402 Following  |  8 Posts  |  Joined: 15.11.2023  |  1.4057

Latest posts by ellispatrick.bsky.social on Bluesky

Thanks mate!

25.09.2025 01:31 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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I’m really chuffed to have been awarded the SUPRA Supervisor of the Year 2025 for the Faculty of Science. Big thanks to my students for nominating me! Your energy, curiosity and drive make supervision the most rewarding part of my role :)

25.09.2025 01:02 β€” πŸ‘ 7    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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pasta: Pattern Analysis for Spatial Omics Data Spatial omics assays allow for the molecular characterisation of cells in their spatial context. Notably, the two main technological streams, imaging-based and high-throughput sequencing-based, can gi...

Interested in spatial statistics for spatial omics data? Check out our new resource: pasta.

We show how different technologies lead to different data modalities give and overview of point-pattern and lattice-based spatial analysis. Feedback welcome!

arxiv.org/abs/2412.01561

04.12.2024 12:14 β€” πŸ‘ 18    πŸ” 7    πŸ’¬ 1    πŸ“Œ 1

I'm feeling pretty excited to have a month off over xmas relaxing at the beach.

I just realised this morning that that month off starts in two weeks! There is no way I'm going to be able to leave my laptop at home this year :(

04.12.2024 20:26 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 2    πŸ“Œ 0
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PhD scholarship in bioinformatics - Flinders University

Reupping this since the explosion in members here.

I’m looking to recruit PhD candidates to work with me in #Bioinformatics and thr human #microbiome Details πŸ‘‡ Please share 😁

www.flinders.edu.au/scholarships...

28.11.2024 05:23 β€” πŸ‘ 36    πŸ” 44    πŸ’¬ 0    πŸ“Œ 0
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Kicking off our Bluesky life by announcing our Statistical Bioinformatics Seminar Judith & David Coffey Invited Speaker. Mon 25/11 Professor Stephen Leslie, Indigenous Australian genomes show deep population structure and abundant novel variation. Online and @ USyd spds.sydney.edu.au/event/specia...

21.11.2024 02:57 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Amazing #BiocAsia2024 event! Thanks to all who participated!
Looking forward to next year!
@bioconductor.bsky.social

11.11.2024 08:19 β€” πŸ‘ 12    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1

Had such a great time at EuroBioC2024, awesome talks and met some amazing people! Definitely keeping an eye on #EuroBioC2025!

@bioconductor.bsky.social #Bioconductor #Bioinformatics

19.11.2024 20:06 β€” πŸ‘ 11    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Ellis' learning of the day. The base R pipe has a placeholder!

link = " is "
link |> paste("Ellis", "dumb", sep = _)
[1] "Ellis is dumb"

19.11.2024 05:47 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Cool sticker!

17.11.2024 20:43 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Academic writing β€” get utilized to it.

14.11.2024 12:49 β€” πŸ‘ 342    πŸ” 74    πŸ’¬ 11    πŸ“Œ 7

Pro-tip for anyone that attended COMBINE yesterday... You can make your name tag double-sided by slotting your COMBINE name tag into the ABACBS name tag. Saves the awkward flick of the name tag when you introduce yourself to someone new! #abacbs23 #abacbs2023

04.12.2023 21:01 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Good morning Brisbane! #ABACBS23 #ABACBS2023

04.12.2023 19:30 β€” πŸ‘ 9    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Bioinformatics wisdom of the day:
When there are too many methods for the same task, you know that none of them is very good.

15.11.2023 10:57 β€” πŸ‘ 20    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

@ellispatrick is following 20 prominent accounts