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@isaacmtzu.bsky.social

Computational biology of non-coding genome. Postdoctoral researcher | University of Toronto

31 Followers  |  68 Following  |  7 Posts  |  Joined: 19.01.2025  |  1.7065

Latest posts by isaacmtzu.bsky.social on Bluesky

Programmed DNA elimination was present in the last common ancestor of Caenorhabditis nematodes https://www.biorxiv.org/content/10.1101/2025.10.23.681605v1

24.10.2025 21:32 β€” πŸ‘ 7    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Argonautes and small RNAs associated with nematode programmed DNA elimination https://www.biorxiv.org/content/10.1101/2025.10.23.684123v1

24.10.2025 02:19 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

This work highlights that parasites πŸͺ± can adapt genomic fossils into tools for cross-species communication 🧬

25.09.2025 13:46 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

We also found that non-autonomous copies and soloLTRs are the preferred sources of secreted exWAGO small RNA guides, suggesting that degradation is followed by co-option for cross-species RNA communication.

25.09.2025 13:46 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Using comparative transcriptomics, we demonstrated that exWAGO regulates a broad set of transposable elements, with a deep and conserved link to the modulation of LTR retrotransposons.

25.09.2025 13:46 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Preview
Comparative transcriptomics reveals an extracellular worm argonaute as an ancestral regulator of LTR retrotransposons. Safeguarding the genome from non-self elements is essential for reproduction, development, and ageing. One of the major threats to genome integrity is Transposable Elements (TEs), which can be post–tr...

Thrilled to share our preprint on the ancestral function of the secreted Argonaute exWAGO πŸ§¬πŸ™
www.biorxiv.org/content/10.1...

25.09.2025 13:46 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

This work highlights that parasites πŸͺ± can adapt genomic fossils into tools for cross-species communication 🧬

25.09.2025 13:41 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

We also found that non-autonomous copies and soloLTRs are the preferred sources of secreted exWAGO small RNA guides, suggesting that degradation is followed by co-option for cross-species RNA communication.

25.09.2025 13:41 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Using comparative transcriptomics, we demonstrated that exWAGO regulates a broad set of transposable elements, with a deep and conserved link to the modulation of LTR retrotransposons.

25.09.2025 13:41 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

The impact of rearing environment on C. elegans: Phenotypic, transcriptomic and intergenerational responses to 3D enriched habitats https://www.biorxiv.org/content/10.1101/2025.09.07.674770v1

09.09.2025 14:45 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Preview
Evolution of developmental bias explains divergent patterns of phenotypic evolution in two nematode clades | PNAS Rates of phenotypic evolution vary across traits, and these evolutionary patterns themselves evolve. Understanding how development contributes to s...

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Evolution of developmental bias explains divergent patterns of phenotypic evolution in two nematode clades

www.pnas.org/doi/10.1073/...

23.08.2025 13:47 β€” πŸ‘ 17    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0

Emergence and stabilisation of a neo-Y chromosome in nematode species with rare males https://www.biorxiv.org/content/10.1101/2025.07.25.666552v1

29.07.2025 23:32 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
electron microscopy image of a C elegans on a yellow background

electron microscopy image of a C elegans on a yellow background

🧬June's most-read Genetics paper independently validates previous research showing that #CElegans can inherit learned pathogen avoidance: buff.ly/HQgprLp

24.07.2025 20:01 β€” πŸ‘ 12    πŸ” 7    πŸ’¬ 1    πŸ“Œ 0

#TREnD2025 virtual day is here!! First talk starting now! πŸ₯³

10.07.2025 17:12 β€” πŸ‘ 5    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

Super excited to see our work shared with the scientific community! We know #Argonaute proteins can be extracellular, but can they be transferred to recipient cells and can they function? Happy reading!

02.04.2025 11:05 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

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