Awesome new work from @labschneeberger.bsky.social (with a small contribution from the Weigel lab). Experimentally observed mutational patterns in centromeres underpin a model that recapitulates intra-specific centromere divergence!
www.biorxiv.org/content/10.1...
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Our work suggests centromere evolution follows a unique mutational path, dominated by small, local events with massive structural consequences.
๐ Read the preprint: doi.org/10.1101/2025...
#genomics #bioRxiv #centromere #Arabidopsis
05.06.2025 08:47 โ ๐ 0 ๐ 0 ๐ฌ 0 ๐ 0
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Simulations using just these small mutations recreated large-scale repeat structures, like higher-order repeats and long-range homology.
Big architecture from tiny edits.
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Key findings:
โข Point mutations occur 9ร faster in centromeres than elsewhere
โข Non-allelic gene conversions copy sequences between repeats
โข In-frame indels preserve repeat structure
โ All without large rearrangements
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Centromeres are full of repetitive satellite DNA, often megabases long, but how do they evolve?
Using Arabidopsis mutation accumulation lines, we tracked real-time mutation patterns in these regions.
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๐จ My first PhD preprint is out on bioRxiv!
We show how tiny mutationsโpoint mutations and kb-level indelsโcan shape the massive structure of Arabidopsis centromeres.
๐ Read it here: doi.org/10.1101/2025...
๐งต A short thread ๐
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Plant genetics and epigenetics @ University of Cambridge, Department of Plant Sciences
Weigel Lab aka WeigelWorld Repostโ endorsement
#OpenScience
COIs http://tinyurl.com/DWCOI2022 GoogleScholar http://tinyurl.com/DeWeScholar
New here!
Postdoc. Speciation genomics, ecological speciation, experimental evolution and comparative genomics. Dogs!
Genome Plasticity and Computational Genetics.
We develop cutting-edge technologies to explore genome evolution!
Lab Website: https://schneebergerlab.org/
plant molecular biology ๐งฌ bioinfomatics ๐งฌpostdoc
@mpipz.bsky.social ๐ฉ๐ช๐ช๐บ, formerly @dundee.ac.uk ๐ด๓ ง๓ ข๓ ณ๓ ฃ๓ ด๓ ฟ๐ฌ๐ง, @sheffielduni.bsky.social ๐ด๓ ง๓ ข๓ ฅ๓ ฎ๓ ง๓ ฟ๐ฌ๐ง
Bioinformatician and Researcher at the Institute of Avian Research
| evolution | birds | genomics | structural variation | non-B DNA | repeats
https://ifv-vogelwarte.de/en/institute/staff/dr-matthias-h-weissensteiner
PhD student in Novikova lab
Plant genomes, polyploidy, ecology & evolution
official Bluesky account (check username๐)
Bugs, feature requests, feedback: support@bsky.app