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Xiao Dong

@justdx.bsky.social

PhD candidate at MPIPZ

20 Followers  |  8 Following  |  5 Posts  |  Joined: 05.06.2025  |  1.5162

Latest posts by justdx.bsky.social on Bluesky

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Awesome new work from @labschneeberger.bsky.social (with a small contribution from the Weigel lab). Experimentally observed mutational patterns in centromeres underpin a model that recapitulates intra-specific centromere divergence!
www.biorxiv.org/content/10.1...

06.06.2025 14:19 โ€” ๐Ÿ‘ 24    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

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Our work suggests centromere evolution follows a unique mutational path, dominated by small, local events with massive structural consequences.

๐Ÿ“„ Read the preprint: doi.org/10.1101/2025...
#genomics #bioRxiv #centromere #Arabidopsis

05.06.2025 08:47 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Simulations using just these small mutations recreated large-scale repeat structures, like higher-order repeats and long-range homology.

Big architecture from tiny edits.

05.06.2025 08:47 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Key findings:
โ€ข Point mutations occur 9ร— faster in centromeres than elsewhere
โ€ข Non-allelic gene conversions copy sequences between repeats
โ€ข In-frame indels preserve repeat structure
โ†’ All without large rearrangements

05.06.2025 08:47 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Centromeres are full of repetitive satellite DNA, often megabases long, but how do they evolve?

Using Arabidopsis mutation accumulation lines, we tracked real-time mutation patterns in these regions.

05.06.2025 08:47 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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๐Ÿšจ My first PhD preprint is out on bioRxiv!
We show how tiny mutationsโ€”point mutations and kb-level indelsโ€”can shape the massive structure of Arabidopsis centromeres.
๐Ÿ“„ Read it here: doi.org/10.1101/2025...
๐Ÿงต A short thread ๐Ÿ‘‡

05.06.2025 08:47 โ€” ๐Ÿ‘ 6    ๐Ÿ” 5    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

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