Suraj Shankar πŸ³οΈβ€πŸŒˆ's Avatar

Suraj Shankar πŸ³οΈβ€πŸŒˆ

@surajshankar.bsky.social

Asst. Prof. in Physics LSA Collegiate fellow University of Michigan Previously JF at Harvard & PhD at SU he/him https://sites.lsa.umich.edu/shankar-lab/ How function emerges collectively in soft, active, living matter? | Physics, maths, & biology

971 Followers  |  938 Following  |  13 Posts  |  Joined: 02.09.2023  |  1.9459

Latest posts by surajshankar.bsky.social on Bluesky

Headline from an article in Nature this week that states "Prizes must recognize machine contributions to discovery. The future of science will be written by humans and machines together. Awards should reflect that reality."

Headline from an article in Nature this week that states "Prizes must recognize machine contributions to discovery. The future of science will be written by humans and machines together. Awards should reflect that reality."

Lol the Nobels can't even acknowledge women's contribution to discovery. But sure let's acknowledge The Machines.

09.10.2025 19:00 β€” πŸ‘ 3422    πŸ” 769    πŸ’¬ 85    πŸ“Œ 67
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Ice Diatoms Glide at Record-Low Temperatures - Eos New observations reveal how microscopic organisms move through polar ice and illustrate how they may have evolved to thrive in extreme environments.

Life knows how to keep going - even if it’s freezing -15 degrees C πŸ₯Ά outside. AGU just covered our discovery of ultra resistant ice diatoms gliding into a world record! πŸ§ͺπŸ”¬Enjoy the story here:

eos.org/articles/ice...

07.10.2025 15:39 β€” πŸ‘ 39    πŸ” 13    πŸ’¬ 0    πŸ“Œ 4
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Epithelial tension controls intestinal cell extrusion Cell extrusion is essential for homeostatic self-renewal of the intestinal epithelium. Extrusion is thought to be triggered by crowding-induced compression of cells at the intestinal villus tip. In th...

1/11 In @science.org: A new perspective on how our intestines renew. Cells are not β€œpushed out” by crowding or die from apoptosis. Instead, cells play a mechanical tug-of-war, where weaker cells extrude, reframing gut renewal as force-regulated. www.science.org/doi/10.1126/...

06.09.2025 19:35 β€” πŸ‘ 75    πŸ” 29    πŸ’¬ 1    πŸ“Œ 1
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Mechanical forces drive evolutionary change A small tissue fold present in fruit fly embryos buffers mechanical stresses and may have evolved in response to mechanical forces.

Dresden researchers @paveltomancak.bsky.social @bruvellu.bsky.social, Carl Modes, @cuencam15.bsky.social ‬ & colleagues published in @nature.com that a tissue fold in fruit fly embryos buffers mechanical stresses & may have evolved in response to mechanical forces. www.mpi-cbg.de/news-outreac...

03.09.2025 15:26 β€” πŸ‘ 81    πŸ” 30    πŸ’¬ 3    πŸ“Œ 3
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Lab’s latest: (mouse) mums grow their guts during pregnancy and lactation: www.cell.com/cell/fulltex...

19.03.2025 17:31 β€” πŸ‘ 169    πŸ” 65    πŸ’¬ 14    πŸ“Œ 6
Title page of the review article 'The Physics of Sensing and Decision-Making by Animal Groups' by Danielle L. Chase and Orit Peleg in Annual Review of Biophysics. Includes illustrations of collective behavior in honeybees: a diagram showing uncommitted scout bees transitioning through decision-making to choose between two nest sites; a honeybee on a honeycomb cell; a cluster of bees hanging from a branch; and a schematic of bees forming a layered cluster.

Title page of the review article 'The Physics of Sensing and Decision-Making by Animal Groups' by Danielle L. Chase and Orit Peleg in Annual Review of Biophysics. Includes illustrations of collective behavior in honeybees: a diagram showing uncommitted scout bees transitioning through decision-making to choose between two nest sites; a honeybee on a honeycomb cell; a cluster of bees hanging from a branch; and a schematic of bees forming a layered cluster.

More on collective behavior: Our new Annual Review of Biophysics piece - with the stellar Danielle Chase - explores how animals sense, share information, and make group decisions. In honeybees and beyond 🐝

www.annualreviews.org/content/jour...

09.08.2025 21:16 β€” πŸ‘ 106    πŸ” 28    πŸ’¬ 1    πŸ“Œ 2
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Out today in Phys. Rev. Fluids, our 'Arrested development and traveling waves of active suspensions in nematic liquid crystals'. The bend instability in active suspensions pairs off against bending resistance in LCs to tell quite a story! 1/20

people.math.wisc.edu/~spagnolie/P...

04.08.2025 17:05 β€” πŸ‘ 41    πŸ” 9    πŸ’¬ 4    πŸ“Œ 0

I’m thrilled to share my first review about microbial ecology + mosquito-borne disease control! Bacteria block pathogen development in the mosquito gut, but which bacteria will produce long-lasting results in the field? Let’s think about colonization and persistence in the mosquito gut! (1/4)

18.07.2025 15:42 β€” πŸ‘ 12    πŸ” 8    πŸ’¬ 3    πŸ“Œ 0

Congrats Kirsty!

14.07.2025 14:26 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Publishing scientific papers is an obstacle course. There are many aspects to this but lengthy review times are one. That's why I am very excited about the new initiative @biologyopen.bsky.social, @biologists.bsky.social open access journal: Fast & Fair 1/n πŸ§ͺ
journals.biologists.com/bio/pages/fa...

14.07.2025 13:57 β€” πŸ‘ 74    πŸ” 22    πŸ’¬ 4    πŸ“Œ 5

This was a fun exercise... reflecting on my accidental path into science, the questions that drive our lab @crick.ac.uk , and thoughts on building a more inclusive scientific community. Grateful for the opportunity @focalplane.bsky.social and Subhajit .

07.07.2025 16:22 β€” πŸ‘ 14    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
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Have you ever thought about inflating tissues?
Or maybe quickly deflating those inflated tissues?

New #EpithelialMechanics pre-print: doi.org/10.1101/2025...
🧡 with pressure control, multiscale buckling, controlled wrinkling

03.07.2025 14:23 β€” πŸ‘ 85    πŸ” 32    πŸ’¬ 7    πŸ“Œ 2
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Our two sister papers on combinatorial metamaterials published today in @physrevresearch.bsky.social, a result of a fantastic SKCM2 collaboration with Chaviva Sirote-Katz at Tel Aviv and TamΓ‘s KΓ‘lmΓ‘n at Tokyo shokef.tau.ac.il

01.07.2025 19:24 β€” πŸ‘ 9    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0
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Emergence of cellular nematic order is a conserved feature of gastrulation in animal embryos Nature Communications - The morphogenetic events that occur during gastrulation involve dramatic cell- and tissue-level changes. Here they show that propagation of nematic order, leading to...

Scientific collaborations come in many flavors & are fun because they expose you to new areas of science. That was definitely the case for this paper, out today. We were definitely in the passenger seat but it was fun to go along for the ride 1/n
rdcu.be/euiZB.

01.07.2025 19:32 β€” πŸ‘ 44    πŸ” 13    πŸ’¬ 4    πŸ“Œ 0
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On Sticks, Karats, and Charades: The Structural Dismantling of American Science The displacement of NSF employees from their headquarters opens a new front in the dismantling of American leadership in science.

good take on the current state of the State attack on scientific infrastructure by @joshuasweitz.bsky.social

joshuasweitz.substack.com/p/on-sticks-...

27.06.2025 21:24 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Chloroplast acquisition without the gene transfer in kleptoplastic sea slugs, Plakobranchus ocellatus The newly opened genome of a kleptoplastic mollusk, Plakobranchus ocellatus, indicated that sequestered plastids retain their activity within the animal cell without horizontal algal gene transfer to ...

You hadn’t heard of kleptoplasty before? It is a pretty amazing phenomenon indeed. I was lucky to learn about it when this paper came to @elife.bsky.social a few years ago: elifesciences.org/articles/60176

25.06.2025 20:59 β€” πŸ‘ 16    πŸ” 5    πŸ’¬ 1    πŸ“Œ 1
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500-million-year-old fossils reveal how the starfish got its arms | Natural History Museum How echinoderms evolved such an unusual shape has long troubled biologists.

Great write-up on our paper by @joshlukedavis.com @nhm-london.bsky.social www.nhm.ac.uk/discover/new...

26.06.2025 09:58 β€” πŸ‘ 50    πŸ” 19    πŸ’¬ 0    πŸ“Œ 1
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Flight simulator for moths reveals they navigate by starlight Hear the biggest stories from the world of science | 18 June 2025

This week on the Nature Podcast πŸ”Š Flight simulator for moths reveals they navigate by starlight

https://go.nature.com/461KE6E

21.06.2025 09:04 β€” πŸ‘ 32    πŸ” 9    πŸ’¬ 1    πŸ“Œ 1
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Woah! Such an important study published in Nature today! Quick thread with some of their key figures!
🧡

19.06.2025 03:10 β€” πŸ‘ 168    πŸ” 80    πŸ’¬ 9    πŸ“Œ 9
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β€œWhy Are We Funding This?” Long-standing myths about β€œsilly science” have contributed to the reckless slashing of government-supported research.

My latest for American Scientist Magazine helps give scientists the tools to fight back against politicized charges that our research is silly or pointless- tools that will work whether you’re asked β€œwhy are we funding this” from your asshole uncle at Thanksgiving or an asshole US Senator.
πŸ§ͺ🌎

17.06.2025 21:47 β€” πŸ‘ 1056    πŸ” 549    πŸ’¬ 34    πŸ“Œ 36
Barbara McClintock portrait

Barbara McClintock portrait

🧬🌽 Happy Transposon Day! 🌽🧬

Today we celebrate the birthday of Barbara McClintock - scientist extraordinaire and discoverer of jumping genes. Still the only woman to have an unshared Nobel Prize in the biomedical sciences #TransposonDay2025

16.06.2025 15:14 β€” πŸ‘ 478    πŸ” 192    πŸ’¬ 5    πŸ“Œ 10

Great work from Mochulska & Francois developing a generative framework for systematically building Dynamical Landscapes of cell fate decision making using modular dynamical components

Important step to interpretable and predictive models of cellular differentiation

www.biorxiv.org/content/10.1...

16.06.2025 05:49 β€” πŸ‘ 22    πŸ” 6    πŸ’¬ 0    πŸ“Œ 1
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After being stuck in Hong Kong after ISSCR meeting unable to fly back home, I managed to get on a plane to London to stay with family, only to learn in the air that our institute was hit. My team is all safe. My lab sustained serious blast damage but we shall overcome! #PeaceNow tnx for messages :)

15.06.2025 01:43 β€” πŸ‘ 60    πŸ” 6    πŸ’¬ 4    πŸ“Œ 1
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Weizmann Institute rn

15.06.2025 06:22 β€” πŸ‘ 42    πŸ” 18    πŸ’¬ 8    πŸ“Œ 4
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Minuscule worms form living towers to hunt for food Scientists observe the nematode’s behaviour in the wild for the first time.

Scientists observe the nematode’s behaviour in the wild for the first time

https://go.nature.com/4dXCMFc

13.06.2025 14:33 β€” πŸ‘ 25    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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Bethesda Declaration β€” STAND UP FOR SCIENCE Support NIH Staff Now!

4. Most importantly though, Jay, despite his espoused commitment to science and the scientific process, is destroying the NIH and is NOT equipped for this job.

As seen in the Bethesda Declaration...which you should go read, sign, and share: www.standupforscience.net/bethesda-dec...

10.06.2025 16:32 β€” πŸ‘ 62    πŸ” 18    πŸ’¬ 0    πŸ“Œ 0

SEVERAL KEY THEMES FROM THE HEARING:

1. Jay is REALLY pushing off accountability on the budget saying that it is "a negotiation between congress and the administration"

I think he is distancing himself from Trump to remain "neutral" & avoid fallout when it (inevitably) comes.

10.06.2025 16:26 β€” πŸ‘ 58    πŸ” 18    πŸ’¬ 3    πŸ“Œ 2
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Dynamic Landscape Analysis of Cell Fate Decisions: Predictive Models of Neural Development From Single-Cell Data Building a mechanistic understanding of cell fate decisions remains a fundamental goal of developmental biology, with implications for stem cell therapies, regenerative medicine and understanding dise...

Our latest "Dynamic Landscape Analysis of Cell Fate Decisions: Predictive Models of Neural Development From Single-Cell Data"

A rigorous mathematical foundation for Waddington's landscape to study cell fate decision making

Applied to ventral neural tube development

www.biorxiv.org/content/10.1...

29.05.2025 12:08 β€” πŸ‘ 135    πŸ” 52    πŸ’¬ 5    πŸ“Œ 3

A closed feedback between tissue phase transitions and morphogen gradients drives patterning dynamics https://www.biorxiv.org/content/10.1101/2025.06.06.658228v1

06.06.2025 12:31 β€” πŸ‘ 7    πŸ” 4    πŸ’¬ 0    πŸ“Œ 1

War is peace! Freedom is slavery! Ignorance is strength

07.06.2025 13:06 β€” πŸ‘ 16    πŸ” 5    πŸ’¬ 0    πŸ“Œ 1

@surajshankar is following 20 prominent accounts