*Multi-region computations in the brain*
When two regions are better than one...
doi.org/10.1016/j.ne...
#neuroskyence
@maxime-beau.bsky.social
@princeton.edu postdoc with @carlosbrody.bsky.social. @ucl.ac.uk alumnus. Into decision-making, cerebellum, #Neuropixels, ML applied to neuro, open-source dev |๐ช๐บ๐ซ๐ท๐จ๐ญ|๐ฅ๐งโ๐ณ โ๏ธ
*Multi-region computations in the brain*
When two regions are better than one...
doi.org/10.1016/j.ne...
#neuroskyence
Applications are open for the 2026 Paris Spring School of Imaging and Electrophysiology! Itโs a great way to discover Paris (โค๏ธ) while learning a pretty wide range of techniques for neuroscience, in a fantastic environment. Share widely: parisneuro.ovh
24.12.2025 09:20 โ ๐ 5 ๐ 3 ๐ฌ 0 ๐ 0Fred Ramsdell was parked at a campground in Montana on Monday when his wife suddenly started shouting. He first thought that maybe she had seen a grizzly bear. Instead, she had regained cell service and had seen a flood of text messages with the same news. โYou just won the Nobel Prize!โ she yelled.
07.10.2025 14:10 โ ๐ 463 ๐ 101 ๐ฌ 8 ๐ 22Neuropixels Ultra!
By @steinmetzneuro.bsky.social, who led a big collaboration
www.sciencedirect.com/science/arti...
100%
19.09.2025 23:57 โ ๐ 0 ๐ 0 ๐ฌ 0 ๐ 0Congratulations!!
19.09.2025 23:56 โ ๐ 1 ๐ 0 ๐ฌ 1 ๐ 0How does the brain decide? ๐ง
Our new @nature.com paper shows that neural activity switches from an 'evidence gathering' to a 'commitment' state at a precise moment we call nTc.
After nTc, new evidence is ignored, revealing a neural marker for the instant when the mind is made up.
rdcu.be/eGUrv
What do representations tell us about a system? Image of a mouse with a scope showing a vector of activity patterns, and a neural network with a vector of unit activity patterns Common analyses of neural representations: Encoding models (relating activity to task features) drawing of an arrow from a trace saying [on_____on____] to a neuron and spike train. Comparing models via neural predictivity: comparing two neural networks by their R^2 to mouse brain activity. RSA: assessing brain-brain or model-brain correspondence using representational dissimilarity matrices
In neuroscience, we often try to understand systems by analyzing their representations โ using tools like regression or RSA. But are these analyses biased towards discovering a subset of what a system represents? If you're interested in this question, check out our new commentary! Thread:
05.08.2025 14:36 โ ๐ 169 ๐ 53 ๐ฌ 5 ๐ 0attractors are the new receptive fields
10.07.2025 12:37 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 0๐ We are excited to share that bombcell is now available in Python! ๐ Automatically sort your units into good/MUA/noise/non-somatic using quality metrics and interpretable & adjustable classification thresholds.
pip install and play around with our toy dataset:
๐ github.com/Julie-Fabre/...
Hereโs the programme: parisneuro.ovh/program/
22.05.2025 09:12 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 0I really recommend sending your students to the Paris Spring School, many imaging and ephys techniques are covered in pretty good depth and the atmosphere is consistently fantastic every year! And in such a setting! parisneuro.ovh
21.05.2025 23:06 โ ๐ 10 ๐ 4 ๐ฌ 0 ๐ 0we're crowd-sourcing a searchable repository of tangible benefits stemming from federally-funded research. Come enjoy the great stories; or send in an idea; or volunteer to join the team.
publicusaresearchbenefits.com
please share and re-share so we get more great stories in there!
Bombcell icon
๐New resource: Bombcell, automated quality control for extracellular electrophysiology
๐กThis is an #opensource, user-friendly toolbox that streamlines quality control for spike sorting outputs.
๐ฉโ๐ฌDevelop by Julie M. J. Fabre
๐Link: open-neuroscience.com/en/post/bomb...
#OpenScience #Neuroscience
Thrilled to share our state-of-the-art method for in vivo cell-type classification and brain region localization, NEMO, which is now now a spotlight at @iclr-conf.bsky.social !
We use NEMO to characterize the electrophysiological diversity of cell-types across the entire mouse brain. ๐ญ ๐งช ๐ง
Two UCL researchers, including Dr Julie Fabre (@uclqsion.bsky.social) have been named as Schmidt Science Fellows, an award given to 32 exceptional early career researchers worldwide.
Congratulations to both Dr @juliefabre.bsky.social & Dr Almarri on this incredible achievement! ๐
How do we associate the flavors we experience during a meal ๐ฝ๏ธ๐ with postingestive effects like food poisoning ๐คข๐คฎ that arise much later?
Our answer in @nature.com this week: Illness signals from the gut reactivate and strengthen flavor representations in the amygdala.
๐: nature.com/articles/s41...
Many of us use 2p scopes to image 3D volumes of brain. But then we analyze the data plane by plane, resulting in duplicated neurons, missed neurons, and low s/n. Let's go 3D!
Suite3D: Volumetric cell detection for two-photon microscopy
by @haydari.bsky.social & team.
www.biorxiv.org/content/10.1...
First off, Bombcell is a MATLAB package (python version coming) developed by @juliefabre.bsky.social. It uses several metrics, like waveform shape, spike amplitudes and drift, to determine whether a detected unit is noise, multi-unit activity, axonal or a single neuron.
github.com/Julie-Fabre/...
It was an honour, thank you @rezashadmehr.bsky.social for organizing this great seminar series!
Talk link: m.youtube.com/watch?v=zy0v...
Congrats!!
21.03.2025 14:36 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 01/7 Our paper on individual variability in decision-making is finally out in @nature.com! Inspired by the classic work by Mante and Sussillo, we trained many rats to solve context-dependent decision-making, and we found that different brains use different neural mechanisms to solve the same task!
21.03.2025 13:28 โ ๐ 237 ๐ 86 ๐ฌ 7 ๐ 5control is a complimentary approach to alignment.
its really sensible, practical and can be done now, even before systems are superintelligent.
youtu.be/6Unxqr50Kqg?...
The International Brain Laboratory reproducibility platform paper is now published at eLife. An amazing effort by many different labs and individuals to understand and improve the reproducibility of electrophysiological measurements in mice. ๐ง
17.03.2025 15:22 โ ๐ 30 ๐ 9 ๐ฌ 2 ๐ 0๐จ New paper alert! ๐จ
Weโve just launched openretina, an open-source framework for collaborative retina modeling across datasets and species.
A ๐งต๐ (1/9)
Standing up for science in Seattle - some lab members (Zhiwen, Nancy, Fabiola, and Jeremy) plus lab-friend Harsha @harshag.bsky.social. If only it seemed like there was the remotest chance anyone in the administration cared about our voices.
08.03.2025 06:24 โ ๐ 20 ๐ 3 ๐ฌ 0 ๐ 0Marseille is ready to #StandUpForScience! #standupforscience2025
07.03.2025 11:05 โ ๐ 617 ๐ 54 ๐ฌ 7 ๐ 1can you explain this 3 year gap in your resume?
yeah the paper was under review
For general thoughts on short-term breakdown in democracy - and also longer-term fixes, sign up for long-form essays. Always free. samwang.substack.com
07.03.2025 00:53 โ ๐ 46 ๐ 12 ๐ฌ 1 ๐ 0