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SmithLabUMBC

@smithlabumbc.bsky.social

We are a diverse group of chemists and biochemists studying the structure-function relationship of metalloproteins πŸ³οΈβ€πŸŒˆπŸ§ͺ🧬 Find us here: https://t.co/eHC3pQp4dz

413 Followers  |  160 Following  |  176 Posts  |  Joined: 13.11.2024
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Posts by SmithLabUMBC (@smithlabumbc.bsky.social)

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Huge congratulations to grad student @katherinelegg.bsky.social on her new Science Advances paper, β€œCHβ€’β€’β€’S hydrogen bonds drive molecular recognition of ergothioneine by the microbial transporter”! πŸŽ‰ A beautiful collaboration of biochemistry, structural biology, NMR, and MD. tinyurl.com/3wxchjhp

02.03.2026 14:28 β€” πŸ‘ 25    πŸ” 6    πŸ’¬ 3    πŸ“Œ 1

Super pleased (and surprised?!) to receive an NOA earlier this week for a supplement supporting a PhD candidate in the lab! A little bit of sunshine in the middle of the storm, I suppose...

25.02.2026 17:43 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Senior Scientist, Protein Sciences in South San Francisco, California, United States of America | Research & Development at Genentech Apply for Senior Scientist, Protein Sciences job with Genentech in South San Francisco, California, United States of America. Research & Development at Genentech

Our department at Genentech is hiring. We're looking for a freshly-minted PhD (0-3 years) protein biochemist / structural biologist to join as a Sr Scientist. A rare opportunity to join our group leader job family at a more junior level than we usually hire.

24.02.2026 16:55 β€” πŸ‘ 55    πŸ” 56    πŸ’¬ 1    πŸ“Œ 0
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Co-translational control of protein stability and quality in plants Abstract. Proteostasis relies on the coordinated control of protein synthesis, folding, modification and degradation, and an increasingly clear picture is

My review β€œCo-translational control of protein stability and quality in plants” is now online at @jxbotany.bsky.social, in which I describe how co-translational processing and ribosome-associated quality control together establish protein stability and fate early in synthesis. tinyurl.com/5dhhz9h6

24.02.2026 09:45 β€” πŸ‘ 40    πŸ” 24    πŸ’¬ 0    πŸ“Œ 0
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X-ray beam effects on metallo-peptides reflect redox events: insights from X-ray absorption spectroscopy measurements on metal complexes of truncated amyloid-Ξ² peptides X-ray exposure influences the structures of Cu(I), Cu(II) and Zn(II) complexes of amyloid-Ξ² (AΞ²) peptides in different ways. While Cu(I) and Zn(II) complexes show no detectable X-ray-induced spectral changes, Cu(II) complexes undergo significant spectral evolution under irradiation. Experiments on the truncated fragments AΞ²1–6 and AΞ²1–16 show that the extent of relaxation depends on the peptide length, on the binding mode and on the temperature.

Bharath Vinjamuri et al.: X-ray beam effects on metallo-peptides reflect redox events: insights from X-ray absorption spectroscopy measurements on metal complexes of truncated amyloid-Ξ² peptides @UGrenobleAlpes...#IUCr https://journals.iucr.org/paper?S2059798326001348

24.02.2026 01:01 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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The structure of the full catalytic cycle of Vibrio cholerae NFeoB The acquisition of iron is critical for the survival and the virulence of numerous infectious pathogens, and most bacteria acquire ferrous iron (Fe2+)…

🚨 Just in press @jmolbiol.bsky.social 🚨 Kate, Candice, and Mark's paper on the structure of the V. cholerae NFeoB NTPase catalytic cycle. Serendipity of a P1 spacegroup with 4 mols in the ASU played a role in capturing all the states, and Mg is pivotal! Read the paper here: tinyurl.com/mr3dmmjz

20.02.2026 17:26 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Oxygen depletion in biomolecular condensates is dominated by macromolecular density - Nature Communications Biomolecules can control biochemical reactions via droplets of macromolecules known as condensates. Here, it is shown that oxygen is partially excluded from such condensates due to the high concentrat...

🚨New paper: We found - contrary to expectations - that oxygen is partially excluded from biomolecular condensates.

We find a strong anti-correlation between oxygen and protein concentrations in the condensate showing that accessible volume dominates over polarity.

www.nature.com/articles/s41...

20.02.2026 15:04 β€” πŸ‘ 22    πŸ” 4    πŸ’¬ 1    πŸ“Œ 2
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Postdoc: Integrative structural biology and biophysics of dynamic plant hormone transporters - Ledig stilling pΓ₯ Aarhus Universitet Ledig stilling ved Institut for MolekylΓ¦rbiologi og Genetik - Proteinvidenskab, Aarhus Universitet

🚨Postdoc opening: Integrative structural biology and interactions of disordered regions in plant transporters.

Skills sought: Protein experience (ideally IDPs/MPs), NMR, SAXS, smFRET, biophysics and similar.

Come find me at #BPS26 or reach out to learn more!

mbg.au.dk/aktuelt/ledi...

15.02.2026 15:12 β€” πŸ‘ 9    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

😬

15.02.2026 19:48 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Science is still correct even if you don’t believe in it…

12.02.2026 20:01 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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In vitro reconstitution in membrane environment reveals critical lipid dependence of substrate S-acylation by protein palmitoyltransferase enzymes Protein S-acylation, also known as protein palmitoylation, is a common form of post-translational modification and the most abundant form of lipid modification of proteins with several thousands of su...

New paper from our lab !
Thousands of proteins are targets of a form of post translational lipid attachment known as protein S-acylation, commonly as protein palmitoylation. 23 transmembrane zDHHC enzymes catalyze protein S-acylation in humans.

1/n

www.jbc.org/article/S002...

12.02.2026 00:50 β€” πŸ‘ 8    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
"Let's align our coordinates" valentine with Oxytocin receptor ("love hormone") aligned with vasopressin receptor

"Let's align our coordinates" valentine with Oxytocin receptor ("love hormone") aligned with vasopressin receptor

Use RCSB PDB's Pairwise Structure Alignment tool to compare existing PDB structures or Computed Structure Models (or upload a local file) #LoveDataWeek
www.rcsb.org/alignment

10.02.2026 17:22 β€” πŸ‘ 8    πŸ” 3    πŸ’¬ 0    πŸ“Œ 2
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@iucr2026.bsky.social Abstract Deadline: February 15

#calgary is calling - submit your work: www.iucr2026.org #Crystallography #structuralscience #StructuralBiology #MaterialsScience #Chemistry #XrayDiffraction #AcademicSky #ScienceSky #SciComm #EarlyCareerResearchers #PhDLife #PostdocLife

10.02.2026 14:26 β€” πŸ‘ 0    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Congratulations and welcome to the newest members of the #ACSBIOL Executive Committee!

@freudlab.bsky.social, @doc-jlmeier.bsky.social, @tmweaver.bsky.social, @ebraselmann.bsky.social

09.02.2026 15:30 β€” πŸ‘ 8    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

πŸ˜¬πŸ˜‚

08.02.2026 23:37 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Functional divergence of the Arg/N-degron pathway between the crop Brassica rapa and the model plant Arabidopsis thaliana The ubiquitin-dependent Arg/N-degron pathway relates the stability of a substrate protein to the nature of its N-terminal amino acid residue or its biochemical modifications, with some N-terminal residues being recognized by specific E3 ubiquitin ligases, resulting in the ubiquitylation and degradation of the substrate protein. Work in the model plant Arabidopsis thaliana has shown that the Arg/N-degron pathway is a key regulator of plant responses to hypoxia, which can be either physiological or a stress in the context of waterlogging or submergence. The role of the Arg/N-degron pathway in hypoxia response is mediated via the oxygen-dependent degradation of group VII ETHYLENE RESPONSE FACTOR (ERFVII) transcription factors, which act as the master regulators of the hypoxia response program in plants. Analysis of Arabidopsis mutants for different enzymatic components of the Arg/N-degron pathway has also revealed its roles in the regulation of responses to other abiotic stresses (e.g. salt stress), as well as to pathogens. Although much has been learned from studies in Arabidopsis about the functions of the Arg/N-degron pathway, very little is known about this pathway in crops, including in Brassica crops such as oilseed rape, cabbage or turnip. To determine functional similarities and divergence of the Arg/N-degron pathway between Arabidopsis and Brassica crops, we isolated and characterized the first Arg/N-degron pathway mutants in Brassica rapa (turnip, pak choi), a diploid Brassica crop closely related to oilseed rape. We focused on two enzymatic components, namely the arginine-transferases ( ATE s) and the E3 ubiquitin ligase PROTEOLYSIS6 ( PRT6 ). Our results show both similarities and divergence of function for these Arg/N-degron pathway components in B. rapa compared to Arabidopsis. Specifically, ATE mutants in B. rapa arrest their development at the seedling stage, which contrasts with the mild phenotypic defects of the equivalent Arabidopsis mutants. Double mutant lines for two of the three PRT6 genes in B. rapa indicated a constitutive activation of hypoxia response genes at the transcriptional level, as shown in the single prt6 mutant in Arabidopsis. However, contrary to Arabidopsis, the B. rapa double mutants were more sensitive to waterlogging and hypoxia, and did not show differential response to salt stress or to biotic stress compared to the wild type. The functional divergence identified likely reflects variability in each species in the substrate repertoire and/or in the regulation of pathways or targets downstream of Arg/N-degron pathway substrates. Such differences could be driven by direct selective pressures at N-termini (e.g. gain or loss of a destabilizing N-terminal residue), or by species-specific proteases that may generate destabilizing neo-N-termini after cleavage. These similarities and differences highlight the difficulties in translating research findings from Arabidopsis to crops, even within the same plant family (Brassicaceae) and highlight the need to study pathways in crops. ### Competing Interest Statement The authors have declared no competing interest. Science Foundation Ireland, https://ror.org/0271asj38, 13/IA/1870, 20/FFP-P/8433 Irish Research Council, https://ror.org/051xex213, GOIPG/2017/2

Protein degradation in Turnip - an adapted Arg/N-degron pathway. Preprint from Brian Mooney et al. Emmanuelle Graciet lab. www.biorxiv.org/content/10.6...

30.01.2026 14:09 β€” πŸ‘ 6    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0

Metal of The Day is Manganese

Symbol: Mn

Important for imparting strength and resistance to steel

Salts of Mn have been shown to be excellent oxidants and are effective in melting ice

We all appreciate Mn
#ChemSky #ChemChat

25.01.2026 03:00 β€” πŸ‘ 74    πŸ” 19    πŸ’¬ 9    πŸ“Œ 3
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A quorum-sensing molecule from Pseudomonas aeruginosa induces defensive multicellularity in a coinfecting pathogen | PNAS Microorganisms commonly exist in polymicrobial communities, where they can respond to interspecies secreted molecules by altering behaviors and phy...

A quorum-sensing molecule from Pseudomonas aeruginosa induces defensive multicellularity in a coinfecting pathogen

-in PNAS from @anukharelab.bsky.social

www.pnas.org/doi/10.1073/...

24.01.2026 11:38 β€” πŸ‘ 36    πŸ” 17    πŸ’¬ 2    πŸ“Œ 0
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Nutrient uptake in commensal bacteria: exploring uncharacterised TonB-dependent transporters. at Newcastle University on FindAPhD.com PhD Project - Nutrient uptake in commensal bacteria: exploring uncharacterised TonB-dependent transporters. at Newcastle University, listed on FindAPhD.com

Lots of PhD opportunities for UK + international students involving my lab. Topics relate to metals & microbiology.

First up: TonB-dependent receptors in commensal Neisseria in my lab at Durham, with @kjosts.bsky.social and @mattbashton.bsky.social.

www.findaphd.com/phds/project...

24.01.2026 14:28 β€” πŸ‘ 24    πŸ” 23    πŸ’¬ 1    πŸ“Œ 1
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio

Come be our colleague--we're hiring! We have an opening for TT Asst. Prof. in Physical Chemistry in the Dept. of Chemistry and Biochemistry. Interests in spectroscopy, optics, or biophysics broadly defined!

I know we're late to the game, but see our add here: apply.interfolio.com/180223

Please RT!

22.01.2026 20:14 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
This line graph illustrates the percentage change in agency staff levels from the previous year for nine major U.S. federal scientific and health organizations between the fiscal years 2016 and 2025. The agencies tracked include the CDC, Department of Energy, EPA, FDA, NASA, NIH, NIST, NOAA, and NSF. For the majority of the timeline between 2016 and 2023, the agencies show relatively stable fluctuations, generally staying within a range of +5% to -5% change per year. However, there is a dramatic and uniform plummet starting in the 2024–25 period. Every agency depicted shows a sharp downward trajectory, with staffing losses ranging from approximately -15% to over -25%. The Environmental Protection Agency (EPA) shows the most significant decline, dropping to roughly -26%, while the National Institute of Standards and Technology (NIST) shows the least severe but still substantial drop at approximately -15%.

This line graph illustrates the percentage change in agency staff levels from the previous year for nine major U.S. federal scientific and health organizations between the fiscal years 2016 and 2025. The agencies tracked include the CDC, Department of Energy, EPA, FDA, NASA, NIH, NIST, NOAA, and NSF. For the majority of the timeline between 2016 and 2023, the agencies show relatively stable fluctuations, generally staying within a range of +5% to -5% change per year. However, there is a dramatic and uniform plummet starting in the 2024–25 period. Every agency depicted shows a sharp downward trajectory, with staffing losses ranging from approximately -15% to over -25%. The Environmental Protection Agency (EPA) shows the most significant decline, dropping to roughly -26%, while the National Institute of Standards and Technology (NIST) shows the least severe but still substantial drop at approximately -15%.

This is the most astonishing graph of what the Trump regime has done to US science. They have destroyed the federal science workforce across the board. The negative impacts on Americans will be felt for generations, and the US might never be the same again.

www.nature.com/immersive/d4...

20.01.2026 22:53 β€” πŸ‘ 14458    πŸ” 8322    πŸ’¬ 90    πŸ“Œ 764

Reminder for those applying for #NIH grants using the #ScienCV templates. You can format the text sections using html codes:
<p> paragraph
<br> break line
<b>bold</b>
<i>italics</i>

16.01.2026 02:18 β€” πŸ‘ 61    πŸ” 34    πŸ’¬ 4    πŸ“Œ 5
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Dealing with ScienCV formatting Some tips for composing and making your new NIH biosketch not look like garbage

Been hearing some horrifying chatter about dealing with the new #NIH common form and #ScienCV system, so I put together a short video with some tricks for mitigating some of those pain points.

Hope it helps? πŸ§ͺ

open.substack.com/pub/emptymod...

17.01.2026 03:28 β€” πŸ‘ 52    πŸ” 38    πŸ’¬ 0    πŸ“Œ 0

*I* don't see what *U* mean, Chemjobber! πŸ˜‚

16.01.2026 23:05 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Flyer for the 2026 Applied Crystallization Workshop at the National Crystallization Center at University at Buffalo. 
What? A 2 day macromolecular crystallization workshop designed
to immerse you in crystal growth methods to jumpstart your structural
biology efforts.
Who? Open to trainees of all levels and early career researchers
Where? On-site at our state-of-the-art crystallization facility in Buffalo, NY
Favored applicants will have previously submitted samples to the NCC for crystallization screening and will have a protein sample to bring on-site for workshops.

Flyer for the 2026 Applied Crystallization Workshop at the National Crystallization Center at University at Buffalo. What? A 2 day macromolecular crystallization workshop designed to immerse you in crystal growth methods to jumpstart your structural biology efforts. Who? Open to trainees of all levels and early career researchers Where? On-site at our state-of-the-art crystallization facility in Buffalo, NY Favored applicants will have previously submitted samples to the NCC for crystallization screening and will have a protein sample to bring on-site for workshops.

We are excited to announce the πŸ’Ž 2026 Applied Crystallization Workshop πŸ’Ž at @getacrystal.bsky.social at University at Buffalo!

Dive into Biomolecular Crystallization! We are holding 2 workshops in 2026. Each will be an intensive, hands-on session to learn about crystallizing your ❀️ biomolecule!

15.01.2026 20:25 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

Da Bears!!!!! 🐻

11.01.2026 04:36 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

It's the best day of the year: lab clean-up day! What will we find this year?! 😁🫠😱

09.01.2026 14:32 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Is your New Year's resolution to unveil structural details for your biological macromolecule?

Reserve a spot in our January protein crystallization run before Friday!

Package Acceptance & Plate Setup:

Tues Jan 12th – Thurs Jan 15th
Tues Jan 20th – Thurs Jan 22nd

07.01.2026 18:51 β€” πŸ‘ 3    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
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Attention NY Area #cryoem #cryoet enthusiasts - The 6th Annual NY Area Cryo-EM meeting is May 27th - Features a workshop/discussion format where new results and techniques will be discussed - We are sponsoring and attending the meeting - zurl.co/WD7l5

07.01.2026 16:00 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0