Paul Thomas

Paul Thomas

@thomaspv.bsky.social

95 Followers 380 Following 2 Posts Joined Nov 2024
2 days ago
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Incredible
cc @capitalweather.bsky.social

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2 days ago
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Ok got to a better spot

We have both sundogs, a full halo, and an inverted halo!

Incredibly rare - don't think I've ever seen the inverted before

@capitalweather.bsky.social

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4 days ago
Images of molecular models of ALG3 and ALG9 proteins with substates bound.

I’m very excited to share some newly published work that uncovers the molecular basis for oligomannose synthesis!

www.nature.com/articles/s41...

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1 week ago
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Vaccine effectiveness of a bivalent respiratory syncytial virus (RSV) pre-F vaccine against RSV-associated hospital admission among adults aged 75–79 years in England: a multicentre, test-negative, ca... This study provides evidence that the RSV pre-F vaccine is highly effective against RSV-associated hospital admissions, including exacerbations of chronic disease, and in adults with immunosuppression...

In 75-79 year olds in UK, the RSV Pre-F vaccine remains highly effective in the real world. 82.3% vaccine effectiveness against hospitalization due to RSV-associated acute respiratory infection and 86.7% effectiveness against severe disease requiring oxygen
www.thelancet.com/journals/lan...

26 10 0 1
2 weeks ago
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Since last year, I've been making a RELION GUI that supports viewing, navigating and running jobs in a way completely compatible with the original RELION pipeline. Now it's working nicely for both SPA and tomography! Please try it out - github.com/hanjinliu/hi...

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1 month ago
EMDB Surpasses 10,000 Entries in a Year wwPDB: Worldwide Protein Data Bank

The wwPDB just hit a major milestone: 𝟏𝟎,𝟎𝟎𝟎 𝐄𝐌𝐃𝐁 𝐞𝐧𝐭𝐫𝐢𝐞𝐬 𝐫𝐞𝐥𝐞𝐚𝐬𝐞𝐝 𝐢𝐧 𝐚 𝐬𝐢𝐧𝐠𝐥𝐞 𝐲𝐞𝐚𝐫. To put this in context, the entire EMDB reached 10,000 entries total in 2019 — now the archive 𝐡𝐚𝐬 𝐬𝐮𝐫𝐩𝐚𝐬𝐬𝐞𝐝 𝟓𝟎,𝟎𝟎𝟎. Huge credit to the community driving 3DEM forward!

www.wwpdb.org/news/news?ye...

#3DEM #EMDB

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2 months ago

Structure and immunogenicity of an engineered soluble prefusion-stabilized EBV gB antigen pubmed.ncbi.nlm.nih.gov/41484092/ #cryoEM

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2 months ago

De novo design of protein nanoparticles with integrated functional motifs www.biorxiv.org/content/10.64898/2025.12.19.695620v1 #cryoEM

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3 months ago

An integrated workflow for structural virology with a 100 keV electron microscope www.biorxiv.org/content/10.64898/2025.12.08.693081v1 #cryoEM

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3 months ago
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How can AI and #cryoEM help save some of the biggest babies on the planet? 🐘🔬

Our new preprint identifies Elephant Herpesvirus gH/gL/gO as a receptor-binding complex and a promising vaccine candidate, now being tested in young elephants across European zoos! 💉

www.biorxiv.org/content/10.6...

35 8 1 2
3 months ago

CryoET of microbes inside an animal organ? Yes it’s possible! Check out our new preprint showing how we did it! What an amazing collaboration with amazing scientists who made this possible!

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3 months ago
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A Mammarenavirus Close to Lassa Virus in a Patient with Meningoencephalitis | NEJM A 37-year-old man in Chad presented with a fever and a headache. An extensive evaluation identified a mammarenavirus, close to Lassa virus, in samples of cerebrospinal fluid.

This is an interesting case of a patient from Chad infected with a novel arenavirus species/variant/strain, presenting with meningoencephalitis.

IMO, could be classified as a highly divergent Lassa virus strain in a new country (similar to what Togo has observed).

www.nejm.org/doi/10.1056/...

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4 months ago
Potent neutralization of Marburg virus by a vaccine-elicited antibody - Nature Nature - Potent neutralization of Marburg virus by a vaccine-elicited antibody

Delighted to share the peer-reviewed version of our article describing a prefusion-stabilized MARV GP vaccine immunogen and a best-in-class MARV neutralizing and protective antibody!

Led by @aminaddetia.bsky.social with @virbiotechnology.bsky.social

@hhmi.org

www.nature.com/articles/s41...

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4 months ago
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Prefusion structure, evasion and neutralization of HSV-1 glycoprotein B - Nature Microbiology Cryo-EM structures of the stabilized prefusion conformation of the glycoprotein B ectodomain—the HSV-1 entry machine—identify a prefusion-specific neutralizing antibody and reveal how prefusion glycop...

🧪 🦠 Prefusion structure, evasion and neutralization of HSV-1 glycoprotein B www.nature.com/articles/s41...

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4 months ago

Neutralizing antibodies against Chikungunya virus and structural elucidation of their mechanism of action pubmed.ncbi.nlm.nih.gov/41184282/ #cryoEM

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4 months ago
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Our new preprint is out 🥳🥳🥳

Henipaviruses, like Nipah and Hendra, package their genomes inside helical shells built by thousands of nucleoproteins. These nucleocapsids are essential to protect the viral RNA, but how do they ever let the polymerase in to read the sequence?

👇

111 47 3 2
4 months ago

Structural Mechanism of Prestin-Membrane Mechanotransduction https://www.biorxiv.org/content/10.1101/2025.10.31.685930v1

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4 months ago

HKU25 clade MERS-related coronaviruses use ACE2 as a functional receptor pubmed.ncbi.nlm.nih.gov/41168429/ #cryoEM

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4 months ago

Genetic diversity in horseshoe bat ACE2 and sarbecovirus spike proteins mutually shape one another https://www.biorxiv.org/content/10.1101/2025.10.26.684670v1

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4 months ago
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Development of a cross-protective common cold coronavirus vaccine | Journal of Virology Human coronaviruses like OC43 cause disease in vulnerable populations, yet no approved vaccines exist. We developed an mRNA vaccine targeting the OC43 spike protein that protects mice not only against...

Development of a cross-protective common cold coronavirus vaccine journals.asm.org/doi/10.1128/...

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4 months ago
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Bat sarbecovirus WIV1-CoV bears an adaptive mutation that alters spike dynamics and enhances ACE2 binding Author summary Recent epidemic-causing coronaviruses, including SARS-CoV-2, originated in bats. Large numbers of such viruses circulate in bats and pose clear and present risks to humans. However, our...

Bat sarbecovirus WIV1-CoV bears an adaptive mutation that alters spike dynamics and enhances ACE2 binding

journals.plos.org/plospathogen...

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4 months ago
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Computationally designed mRNA-launched protein nanoparticle immunogens elicit protective antibody and T cell responses in mice Genetic delivery of designed protein nanoparticles displaying the SARS-CoV-2 RBD elicits potent neutralizing antibody and CD8 T cell responses.

Applying computational design, researchers in #ScienceTranslationalMedicine present an integrated vaccine platform that combines the strengths of mRNA and nanoparticle technologies, and show it elicits strong immune responses in a SARS-CoV-2 model system. https://scim.ag/3W9M09p

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5 months ago
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Very excited that my final postdoctoral work is now online in Cell @cellpress.bsky.social.

www.sciencedirect.com/science/arti...

Using 16 (!) cryo-EM structures, we uncovered how the three proteins coronin, cofilin and AIP1 work together to rapidly disassemble actin filaments.

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6 months ago
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Understanding the future risk of bat coronavirus spillover into humans: correlating sarbecovirus receptor usage, host range, and antigenicity. Sarbecoviruses interact with their receptor, angiotensin converting enzyme 2 (ACE2), via the receptor binding domain (RBD) of Spike, the immunodominant target for neutralising antibodies. Understandin...

Really excited to have been a small part of this work investigating sarbecovirus host range, receptor usage and antigenicity!
www.biorxiv.org/content/10.1101/2025.09.03.673949v1

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6 months ago
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A nanobody specific to prefusion glycoprotein B neutralizes HSV-1 and HSV-2 - Nature A neutralizing nanobody specific to the prefusion conformation of herpes simplex virus glycoprotein B has cross-species activity and offers insights into virus neutralization, possible immunogens and ...

Prefusion gB of HSV bound with a neutralizing nanobody www.nature.com/articles/s41...

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6 months ago
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Aminopeptidase N is a receptor for hedgehog merbecoviruses Merbecoviruses, closely related to the highly pathogenetic Middle East Respiratory Syndrome Coronavirus (MERS-CoV), circulate in hedgehogs throughout Europe and Asia, raising concerns about zoonotic t...

New preprint! If some merbecoviruses use DPP4 and others use ACE2, what do those hedgehog merbecoviruses use?! As it turns out, neither! In our latest study, we uncover the "missing" receptor for the MERS-related viruses in hedgehogs. [These findings were first shared at ASV this year] (1/6)

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6 months ago
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Characterization of the glycoproteins of fish and amphibian influenza B–like viruses Fish and amphibian influenza B–like viruses show functional divergence and lack immunity in humans.

Characterization of the glycoproteins of fish and amphibian influenza B–like viruses www.science.org/doi/10.1126/...

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6 months ago

Structural elucidation of a unique binding mode by an intact alphavirus human IgG molecule to a quaternary epitope pubmed.ncbi.nlm.nih.gov/40830099/ #cryoEM

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6 months ago
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Our aim was to create a kit to produce in-house 1.2 holey carbon cryoEM grids, in three simple steps, at less than half of the prize, and without due times. I think we are there. Academic teams that want to know more, receive training or order a kit, please contact grids@puxano.com.

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7 months ago
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The N terminus of H3-influenza hemagglutinin as a site-of-vulnerability to neutralizing antibody Rawi et al. investigate the conserved, flexible, and accessible H3-hemagglutinin N terminus, which is 10 residues longer than that of other influenza subtypes. They find a “peptide-prime-trimer-boost”...

The N terminus of H3-influenza hemagglutinin as a site-of-vulnerability to neutralizing antibody www.cell.com/structure/fu...

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