@imkeller.bsky.social
Biophysicist interested in immunology. Professor at Goethe University Frankfurt | Frankfurt Cancer Institute. https://agimkeller.github.io
๐ข We are announcing the Adaptive Immune Profiling Challenge 2025!
Can you predict immune state labels from adaptive immune receptor repertoires?
๐ฐ $10,000 prize pool!
๐๏ธ Launches Nov 5 on @kaggle.com
More Info: uio-bmi.github.io/adaptive_imm...
The first publication by my independent research group in collaboration with many partners in Frankfurt. @loewe-fci.bsky.social @goetheuni.bsky.social #EdingerInstitut #DKTK @schuckjonas.bsky.social @zezzenya.bsky.social
22.10.2025 07:36 โ ๐ 5 ๐ 2 ๐ฌ 5 ๐ 1
Our new publication in @cp-immunity.bsky.social: Tertiary lymphoid structures with signs of functional adaptive immune responses in a subset of human gliomas. Association with longer overall patient survival and more immune-permissive tumor microenvironment.
doi.org/10.1016/j.im...
Tertiary lymphoid structures in a subset of gliomas that show signs of functional adaptive immune activation and are associated with longer overall patient survival and an immune-permissive tumor microenvironment @cp-immunity.bsky.social
www.cell.com/immunity/ful...
Reminder ๐
Interested in improving our R tools for #MassSpectrometry data analysis and integrating them into Galaxy?
โฒ๏ธ 3 year position
๐ Bolzano, ๐ฎ๐น
๐ apply if you like:
- #rstats SW development
- @bioconductor.bsky.social
- large-scale #metabolomics data analysis
- hiking โฐ๏ธ
๐ bit.ly/46AMawx
๐ Postdoc / Bioinformatician in Computational Multi-Omics for Precision Oncology at Heidelberg University Hospital: karriere.klinikum.uni-heidelberg.de/index.php?ac...
A great short-term opportunity for anyone looking for a bridge position between PhD, postdoc, or the next career step.
EuroBioC2025 group photo on PRBB terrace with sea in background.
EuroBioC2025 welcome in PRBB auditorium by host Robert Castelo, showing slides with conference sticker and sponsor logos.
EuroBioC2025 hexwall banner with the hexwall creator Kevin Rue-Albrecht standing beside it.
EuroBioC2025 carved wooden keyring, a gift for all participants, created by Annekathrin Nedwed.
EuroBioC2025 is in full swing here in Barcelona!
Day 1 was full of great talks, conversations, and that amazing Bioconductor community energy. Excited for whatโs ahead today and tomorrow!
#EuroBioC2025 #Bioconductor #OpenScience #Community
Heads up: ignore samtools dot org, similarly minimap2 dot com and likely others. It's owned by a known phishing site and while the binaries they offer look valid currently (but note they may be serving us different binaries to others), that could change.
Ie: it's not us (Samtools team)! Be warned
More details on our group website: agimkeller.github.io/recruit.html
10.09.2025 08:29 โ ๐ 3 ๐ 1 ๐ฌ 0 ๐ 0PhD position available in my group in Frankfurt. Explore adaptive immune responses in metastatic colorectal cancer using multi-omics and AIRR profiling. #TRR417 @loewe-fci.bsky.social
georg-speyer-haus.de/karriere/ste...
Our paper identifying evidence of off-target probe binding in the 10x Genomics Xenium Breast Gene Panel is now available as a reviewed preprint at #eLife
elifesciences.org/reviewed-pre...
We look forward to revising the paper to incorporate reviewer recommendations and other updates ๐งต๐
Reminder ๐ฃ
still time to apply to the position in my team!
- statistical modeling
- large scale #metabolomics and #proteomics data
- #rstats , #python
๐ Bolzano, โฐ๏ธ, ๐ฎ๐น
๐https://eurac.onboard.org/jobs/Q4301nGV
๐ฌ PhD Position in Bioinformatics!
Join my group at Heidelberg University (lu-group-ukhd.github.io) to study AML dormancy & therapy resistance using multi-omics & single-cell data.
๐Apply or share: www.jobvector.de/job/bioinfor...
1/6 ๐งฌ NEW COMMENTARY ๐งฌ
Letโs talk about the challenges in immunoglobulin (IG) & T cell receptor (TR) gene nomenclature in the era of modern genomics.
A ๐งต on why itโs time to rethink how we name these genesโand what it means for immunogenetics.
#IGTR #Genomics #Immunology
We are currently recruiting a bioinformatics/computational biology postdoc to join the infrastructure project of a newly funded large research consortium (SFB-TRR) on Circadian Medicine between Charitรฉ - Universitรคtsmedizin Berlin and Universitรคt zu Lรผbeck โ โฐ โฑ๏ธ ๐ฐ๏ธ !
02.07.2025 08:51 โ ๐ 8 ๐ 10 ๐ฌ 1 ๐ 0๐ #MeetOurDataStewards #1: Ksenia Krooร
New to bioimage data? This workshop offers a practical introduction to @nfdi4bioimage.bsky.social and I3D:bio, common challenges and the OMERO platform. Learn about image analysis tools and how to select data repositories.
๐ zenodo.org/record/13861...
Last chance to apply to this PhD position with @mlolab.bsky.social
27.03.2025 07:41 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 0๐งฌ๐ฅ๏ธ #iHet code is available at: github.com/Computationa...
17.03.2025 06:05 โ ๐ 5 ๐ 2 ๐ฌ 0 ๐ 0We are recruiting a PhD student in Computational Biology to work on omics data and spatial integration in cellular immunotherapy of cancer. Joint project with the group of Florian Bรผttner. @loewe-fci.bsky.social
agimkeller.github.io/recruit.html
Interested in understanding what B cells do in brain tumors? We offer a Master's thesis project in molecular biology / tumor immunology. Apply and join us at Edinger Institute in #Frankfurt
@loewe-fci.bsky.social
agimkeller.github.io/recruit.html
Many women, one mission: LOEWE top research from Hesse. February 11: Women & Girls in Science Day. @tuda.bsky.social @jlugiessen.bsky.social @goetheuni.bsky.social @unikassel.bsky.social @unimarburg.bsky.social @thm.de
@synmikro.bsky.social @ciesek.bsky.social @susanneherold.bsky.social @sgn.one
@imkeller.bsky.social @melanietichet.bsky.social
10.02.2025 13:17 โ ๐ 3 ๐ 1 ๐ฌ 0 ๐ 0
