@physaliacourses.bsky.social
We offer scientific training courses in #Bioinformatics #Genomics #ecology #evolution #python, #rstats, #dataviz #DataScience https://www.physalia-courses.org/courses-workshops/
#Unix powers #bioinformatics workflows, enabling data processing, automation, and reproducibility. Master the command line to unlock these skills! Join our online course in January 2026: www.physalia-courses.org/courses-work...
04.12.2025 13:49 β π 0 π 0 π¬ 0 π 0
π¨ Last call! Our #ScientificWriting course has just one seat remaining.
If youβre interested, now is the time to grab the final spot:
www.physalia-courses.org/courses-work...
Huge thanks to @sedlazeck.bsky.social l Luis and everyone who joined our Structural Variant Detection & Comparison course! πβ¨
We dived deep, learned tons, and had some insightful questions and lively discussions β you all made it very successful!
Wishing you all the best smashing your projects!
Weβre lucky to have Prof. Ziheng Yang @zihengyang.bsky.social βone of the leading figures in phylogenomicsβdeliver 2 lectures on the Multispecies Coalescent Model. Tomorrow, heβll dive into Models of Gene Flow (introgression & migration).
#Phylogenomics #GeneFlow
π§¬Course Alert! π
Join us ONLINE, 7β10 April, for the #ConservationGenomics course with @eljensen.bsky.social & Cathy Cullingham!
Learn how population genomics guides conservation decisionsβstudy design, SNP filtering, structure, adaptation & more.
www.physalia-courses.org/courses-work...
Are you a biologist or a budding bioinformatician looking to expand your coding toolkit? This 5-day intensive course will make @bioconductor.bsky.social package development accessible and practical.
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Dates: (online) 6β10 July 2026
www.physalia-courses.org/courses-work...
π Join our online course: Introduction to Population Genomics with @bourgeoisyann.bsky.social & @tiboleroyinen.bsky.social
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16β20 March 2026
Hands-on training in bioinformatics, population structure, demographic modeling & more!
www.physalia-courses.org/courses-work...
We are thrilled to announce the first official release (v0.1.8) of #π―π²π±π±π²πΏ, the successor to one of our flagship tool, #π―π²π±ππΌπΌπΉπ! Based on ideas we conceived of long ago (!), this was achieved thanks to the dedication of Brent Pedersen.
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Join our online #ComparativeGenomics course with Ingo & @sedlazeck.bsky.social , 23-27 Feb 2026! Learn genome assembly, variant detection (SNVs & SVs), and functional impact analysis with hands-on sessions.
www.physalia-courses.org/courses-work...
#Bioinformatics #Genomics
π’ Course alert!
Join us in Februar for #FlowCytometry Data Analysis with #Rstats/#Bioconductor (online) course.
Learn preprocessing, clustering-based cell population identification, and best practices for analysing flow, mass, and spectral cytometry data.
www.physalia-courses.org/courses-work...
Very happy to kick off the 5th edition of the #Phylogenomics course with @kaplipa.bsky.social , Tomas Flouri, @sabifo4.bsky.social , @zihengyang.bsky.social , and a wonderfully diverse cohort of attendees from all around the globe!
01.12.2025 16:12 β π 3 π 3 π¬ 0 π 0
We have just started the workshop on Structural Variant detection from short @illumina and long reads @nanoporetech.com @pacbio.bsky.social with @sedlazeck.bsky.social , Luis and a very international group of attendees.
www.physalia-courses.org/courses-work...
π New course!
Dealing with Messy Data in R: Cleaning & Visualisation
8β10 April β’ Online β’ with @cecibaldoni.bsky.social
Learn tidyverse + ggplot2 to clean, wrangle, & visualise real-world messy data.
www.physalia-courses.org/courses-work...
#Rstats #MessyData #Dataviz
German academia: great place to work? You should think twice before giving it a try: Permanent positions are very rare, most scholars have to drop out after some precarious years. @dianakwon.bsky.social has written a great piece about this for @nature.com and also talked to yours truly. #IchBinHanna
28.11.2025 12:17 β π 195 π 95 π¬ 3 π 14
plinkQC: An Integrated Tool for Ancestry Inference, Sample Selection, and Quality Control in Population Genetics www.biorxiv.org/content/10.1... π§¬π₯οΈπ§ͺ R package meyer-lab-cshl.github.io/plinkQC/ #Rstats
28.11.2025 15:01 β π 14 π 10 π¬ 0 π 0
Many thanks to @epasolli.bsky.social for another fantastic edition of the shotgun #Metagenomics course! Thanks to Michele for his support and to everyone who joined us this week.
We canβt wait to see your papers out in the worldβgood luck to you all! ππ¦ π§¬
Many thanks to Camilla Alves Santos, PhD, Michael Paulini @sangerinstitute.bsky.social and everyone who has joined us this week for the 2nd edition of the Genome Manual Curation using PRETEXTVIEW course.
Thanks everyone!
π Registrations are now open for our brand-new course on Spatial Transcriptomics, taught by Tancredi Pentimalli from the Max DelbrΓΌck Center in Berlin.
π Check it out: www.physalia-courses.org/courses-work...
#SpatialTranscriptomics #BioinformaticsTraining #DataScience @bioconductor.bsky.social
Yesterday we wrapped up the first edition of Marine Spatial Data in R with @david-march.bsky.social π
Four days packed with insights β from benthic and pelagic data to biodiversity records and human-impact layers β all geared toward better marine research and conservation.
What a ride! π
π₯ Epigenomics Data Analysis β Online Course
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13β17 April 2026
Join us and learn more about RNA-seq, ATAC-seq, ChIP-seq, MNase-seq & Hi-C, from raw reads to multi-omics insights, in one hands-on week.
www.physalia-courses.org/courses-work...
#Epigenomics #Bioinformatics #Genomics #Bioconductor
Unlock the power of #Metabarcoding in #MicrobialEcology!
Join our online course, with Anna Luigi and @delcampolab.bsky.social in March
@qiime2.org #Rstats
www.physalia-courses.org/courses-work...
Dive into marine genomics surrounded by the stunning beauty of Crete! πβ¨ Stop dreaming and start learningβjoin us in May 2026 at the Hellenic Centre for Marine Research for an incredible course with Tereza Manousaki @markravinet.bsky.social & Oliver Selmoniπ
www.physalia-courses.org/courses-work...
Join our online course Orchestrating Microbiome Analysis with @bioconductor.bsky.social (2β6 Feb 2026)! Learn hands-on microbiome data analysis, diversity metrics, and multi-omics integration with @antagomir.bsky.social & Tuomas Borman .
www.physalia-courses.org/courses-work...
Today we kicked off the 2nd edition of our Shotgun #Metagenomics course with the brilliant @epasolli.bsky.social ! π Thrilled to welcome an incredible cohort of participants joining us from all around the world π
25.11.2025 18:48 β π 2 π 1 π¬ 0 π 0
Our new course on Marine Spatial Data in R with Dr. David March (University of Valencia) is officially underway!
Day 1 already brought great insights and hands-on learning β and weβre excited for the next three days of advanced methods, practical workflows, and inspiring discussions ππ
π Seats still available for only two upcoming courses:
- Structural Variants (SV)
- Genomic Data Visualisation
All other courses are fully booked!
Learn the full GWAS workflow in our 5-day online course (26β30 Jan 2026) @oscargenomics.bsky.social
From study design to data analysis with R & Linux tools, gain hands-on skills to run your own GWAS.
#GWAS #Genetics #Bioinformatics
www.physalia-courses.org/courses-work...
Master #Quarto & transform your scientific work!
Join our 2-day online course with @mickael.canouil.fr to learn how to create reproducible, polished, multi-format documents with R/Python/Julia integration. Boost your workflow & impact!
www.physalia-courses.org/courses-work...
#Rstats #DataScience
Another great edition of the Integrating Large Language Model Tools into R Workflows course with Luis D. Verde Arregoitia is wrapping up! π
A big thanks to everyone joining us after the WEEN Conference.
AI + R = π₯
#RStats #AI #LLM
Registrations are now closed for the upcoming course on GAMs in R with @gsimpson.bsky.social
Thanks everyone and see you in December!
www.physalia-courses.org/courses-work...
#GAMs #Rstats #gratia #mgcv
