Happy to share this work from Carlos Camacho de la Maccora that reveals how rates of posterior progenitor addition and anterior vacuolation are balanced across the notochord. With Alberto Ceccarelli and @osvaldo-chara.bsky.social we present a model of long-range communication to provide robustness.
19.02.2026 07:52 β
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Cover of the December 1996 issue of Development that describes the results of The Big Screen.
Published 30 years ago, 'The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio' by the NΓΌsslein-Volhard Lab highlighted the arduous work that took place during 'The Big Screen'. In total, 1163 mutants were described. #ZebrafishFunFacts π§ͺ
16.02.2026 09:07 β
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I think that, like with art, papers offer an opportunity for you to tell the story your own way. Could another person research the same question? Yes. However, each person has the opportunity to do it and communicate it in their own way, and we must protect that π§ͺ
10.02.2026 15:13 β
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Want to come do a postdoc with us?
Weβre interested in how sensorimotor function is carried out by the cells and circuits of the spinal cord. We have an awesome team, lots of cool techniques, and weβre open to new ideas/approaches/connections. Get in touch!
04.02.2026 01:00 β
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ESFS: A Noise-Resilient Framework for Feature Selection and Marker Gene Discovery in Single-Cell Transcriptomics
Single-cell RNA sequencing (scRNA-seq) has transformed our ability to resolve cellular heterogeneity, but extracting meaningful signals remains challenging due to technical noise, batch effects, and the limitations of current feature selection methods. We present Entropy Sorting Feature Selection (ESFS), a modular, user-friendly framework that captures multivariate gene expression relationships without imputation or denoising via latent spaces. Across diverse datasets, ESFS improves interpretability and reveals biology missed by standard workflows: identifying coherent developmental programs in eight independent human embryo datasets without batch integration; resolving spatial gene expression in mouse colon obscured by conventional analyses; distinguishing shared and tumour-specific microenvironments in glioblastoma; and disambiguating spatial, temporal, and neurogenic programs in the developing mouse neural tube. By operating in gene expression space, ESFS produces interpretable, biologically meaningful outputs while reducing artefacts introduced by feature extraction. These results position ESFS as a powerful means to uncover relevant molecular signatures in noisy, high-dimensional transcriptomics data. ### Competing Interest Statement The authors have declared no competing interest. Cancer Research UK, CC001051 Medical Research Council, https://ror.org/03x94j517, CC001051 Wellcome Trust, CC001051 Wellcome Trust, 220379/D/20/Z European Molecular Biology Organization, 792-2021 UK Research and Innovation, EP/X031225/1
Our latest: A gene selection method for single-cell RNA-seq that identifies developmental & spatial patterns missed by other analysis pipelines
ESFS: A Noise-Resilient Framework for Feature Selection and Marker Gene Discovery in Single-Cell Transcriptomics | bioRxiv www.biorxiv.org/content/10.6...
28.01.2026 05:59 β
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Ontogeny of the spinal cord dorsal horn
The dorsal horn of the mammalian spinal cord is organized into laminae where each layer is populated by different neuron types, has distinctive circuit connections, and plays specialized roles in beha...
Excited to share @rbrianroome.bsky.social βs beautiful paper on development of the dorsal horn of the mouse spinal cord @science.org
This is how the anatomical organization and cell types that process pain, touch, body position and more are laid down.
www.science.org/doi/10.1126/...
08.01.2026 19:59 β
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Congrats all, beautiful work! I'm very happy to see it out!
08.01.2026 21:28 β
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Save the date 23-26 June 2026
The Third Edition of
The PALS Summer School in OMICS is on!
Soon registration+other info
If you are interested to teach (if you are a former participant) please get in touch with me or @remeseiro-lab.bsky.social
π @scilifelab.se @kawresearch.bsky.social
10.12.2025 08:18 β
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A poster listing the names of invited speakers at the upcoming BSDB 2026 meeting at the University of Warwick, 23-26 March
Meeting schedule now online for @bsdb.bsky.social 2026 spring meeting: Molecules to Morphogenesis!
***Abstracts due in by January 16***
Join the outstanding line up! Submit your abstract for a short talk, flash talk, or poster presentation:
πππ
bsdb.org/meetings/
09.12.2025 10:07 β
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It's always special when you find your own paper in the table of contents of the journal π
"The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube" -> Now out in its final form
www.cell.com/developmenta...
18.11.2025 16:11 β
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Thanks a lot Karina!
18.11.2025 13:55 β
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Thank you so much, very happy you liked it!
02.11.2025 08:26 β
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Doctoral clinical fellows
The Crick's clinical PhD programme.
Just a few weeks left to apply for our clinical PhD programme.
We're looking for clinicians who are passionate about research to join the 3-year fully funded programme.
Learn more and see what positions are available β¬οΈ
www.crick.ac.uk/careers-and-...
30.10.2025 09:41 β
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Our latest: *Hierarchical lineage architecture of human and avian spinal cord revealed by single-cell genomic barcoding*
For a summary & the digested highlights see threadπ§΅ from @giulia-boezio.bsky.social
www.biorxiv.org/content/10.1...
27.10.2025 08:50 β
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Thanks a lot, Antoine! Hope to catch up soon.
27.10.2025 13:54 β
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I am absolutely delighted to share the invited speakers for our upcoming @bsdb.bsky.social "Molecules to Morphogenesis" meeting!
Registration and abstract submission is now open - join us!
bsdb.org/meetings/
March 23-26, 2026 - UK
23.10.2025 17:25 β
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Join us next year for this amazing conference on human development from many angles
The HDBI has been one of the best things I've got to take part in during my postdoc. Excited to end it with a blast!
27.10.2025 11:32 β
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Come and join us for a fantastic conference around all things human development and growth!
Lots of talks from abstracts and a stellar lineup of invited speakers? YES.
Hope to see you all there !
@wellcometrust.bsky.social
11.07.2025 14:05 β
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We've updated our first #preprint from the lab! A collaboration with @jamesbriscoe.bsky.social
π₯ now including in vivo π&π€ embryo data
www.biorxiv.org/content/10.1...
28.09.2025 10:04 β
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Oh thanks Alejo, that's very kind! And well, thanks for developing the approach, it's amazing to be able to use it in so many systems!
26.10.2025 20:27 β
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π₯Ήπ€
26.10.2025 17:58 β
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I'm all ears. Let's chat soon!
26.10.2025 17:50 β
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Thanks! I'm so glad this GIF got to Bluesky too! What a privilege π
26.10.2025 17:39 β
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Really impressive study on spinal cord development by @giulia-boezio.bsky.social and @jamesbriscoe.bsky.social. #neurodevelopment
24.10.2025 17:23 β
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A special thanks to the incredible @crick.ac.uk facilities, HDBR and their donors, the @wellcometrust.bsky.social -funded HDBI consortium, EMBO, URKI and Wellcome.
26.10.2025 17:15 β
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None of this would have been possible without my amazing coauthors Jasper Depotter, Tom Frith, Arthur Radley, Stephanie Strohbuecker, Ana Cunha and Michael Howell. Special thanks to my mentor @jamesbriscoe.bsky.social for unwavering support and invaluable scientific guidance
26.10.2025 17:15 β
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This project let me explore some of my favourite questions: how progenitors generate diversity, how lineage sculpts organ complexity, and whether memory & trajectories leave a mark in final cell identity. Grateful for the journey so far, and excited to keep exploring these ideas moving forward!
26.10.2025 17:15 β
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