Loren Looger lab

Loren Looger lab

@loogerl.bsky.social

UCSD, HHMI Neuroscience, protein design, climate change

1,144 Followers 840 Following 66 Posts Joined Aug 2024
2 weeks ago

ok shoot, so what else can be done to improve the situation besides making IP-free reporters & actuators? I don't know enough about how the cells themselves are controlled

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2 weeks ago

of course! but being distributed by Addgene != being completely free of IP concerns. They just handle the MTA. Dream is zero MTAs, zero restrictions, zero profits.

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2 weeks ago

ah so if the reporters, actuators, CRISPR, etc. tools were themselves uncoupled the lines would as well? so it's not in the means of creation of the lines? Otherwise seems like focusing on the reagents solves this problem too, just later?

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2 weeks ago

and related fields - are FPs an IP problem at all these days? I thought most of those had expired and/or had freely available equivalents. Is this not the case?

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2 weeks ago

hey @eqvanalytics.bsky.social have you encountered any problems using our stuff for free? please call us out if you have, I'd love to know. I am unaware of anyone having problems freely & easily using our stuff.

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2 weeks ago

have ppl encountered any IP problems getting to use any of the tools we've made? GCaMP? RCaMP, SnFRs, AAVretro, etc.? we tried to make access trivial and cheap. but if there are problems, please let me know. we could try to break patents on all those to make shareware versions, if this is a problem

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2 weeks ago

I love the pushback, seriously. call me out if I'm full of shit.

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2 weeks ago

and my philosophy of how such an organization would work would be to patent things, give free licenses to non-profits, and figure out what to do with for-profit orgs. Idea would be to not make any $ from patents, or if there was minimal to funnel it back into patent-breaking research.

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2 weeks ago

That's the plan! To state my philosophy, and that of HHMI, I patent everything we do to protect access, and then give all academics free access. I will continue doing this in the space where I already have patents, and I want to expand into other spaces.

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2 weeks ago

can you please be more specific about which exact steps of iPSC generation are IP-constrained?

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2 weeks ago

I guess it could be funded in an ad hoc manner - e.g., some entity that wants access to new AAV vectors funds that work, a Parkinson's foundation funds breaking patents on progress-inhibiting antibodies in that space, etc. etc.

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2 weeks ago

a PROPOSED Robin Hood. but Robin Hood is convening a focus group to make sure that targets are chosen rationally. and then obviously funding is a real conundrum. Does anyone know people that would like to fund such an effort? It would, by definition, not be a money-making endeavor.

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2 weeks ago

ok apparently RNAi, CAR-T have big thickets too

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2 weeks ago

and I think it's time to fight back. are there patent thickets in the climate / environmental remediation space? those would be of particular interest since there's none of this other crap on a dead planet. please RT and provide your favorite patent thickets that need breaking.

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2 weeks ago

Ideal targets would be amenable to patent breaking by protein design and engineering. Obv there would be lots of industry resistance - and likely from other sources, like universities that don't want patent revenue endangered. but IMHO patents clearly do much more harm than good, 3/

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2 weeks ago

fusion polymerases, inducible expression systems, some sequencing stuff. what else? apparently these are called "patent thickets." worst historical examples include antibodies, which were utterly destroyed for decades by corporate greed. BRCA1/2 greed killed 1000s of women. Golden rice. Celera. 2/

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2 weeks ago

hey team! I need advice! If there were theoretically an organization whose sole purpose was to systematically identify and break nuisance and stupid IP in the biomedical space, creating shareware equivalents, what would be the highest value targets? e.g., AAV serotypes, antibodies, CRISPR, 1/n

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3 months ago

Nice! Thanks @lintianphd.bsky.social @loogerl.bsky.social @michaelzlin.bsky.social @rhodamine110.bsky.social Eric Schreiter + many other engineers for in vivo neuro.

Also: Thanks to the virus and transgenic engineers, like @hongkuizeng.bsky.social Viviana Gradinaru, Josh Huang, etc. 1/2

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3 months ago
Preview
How genetically encoded sensors have lit up neuroscience Tools that track specific molecules in neurons have enabled researchers to probe previously unexplored aspects of neurobiology — although important caveats remain.

Thanks to @nature.com for featuring our work in this piece on genetically-encoded sensors.

The article does a great job highlighting their importance for both basic research and translational impact, such as in our lab's research on serotonin.

www.nature.com/articles/d41...

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6 months ago
Post image Post image

On the latest ep of the Climate Biotech Podcast, hear how synthetic biology legend @loogerl.bsky.social is turning his protein engineering expertise to developing tools to study methane monooxygenase, an enzyme that could unlock methane removal.

Listen in: podcasts.apple.com/us/podcast/t...

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6 months ago
Preview
On the most recent episode of the Climate Biotech Podcast, we are joined by Loren Looger, Professor of Neurosciences at UC San Diego and Investigator at Howard Hughes Medical Institute (HHMI). | Homew... On the most recent episode of the Climate Biotech Podcast, we are joined by Loren Looger, Professor of Neurosciences at UC San Diego and Investigator at Howard Hughes Medical Institute (HHMI). Loren i...

My absolute privilege to be interviewed by @homeworld.bsky.social‬: www.linkedin.com/feed/update/.... we talk methane, brains, tools, Alabama, you know - all the things. this is a fun and insightful podcast series. and HW is really getting it done in the granting/research space! check them out!

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7 months ago

what do ppl think is going to happen to this 6 NIH grant app maximum? will it stick? how are people interpreting the whole co-PI vs MPI thing?

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7 months ago

Thanks to Garden Grant co-funders
@sparkclimate.bsky.social sky.social and @granthamcsf.bsky.social, and to Quadrature Climate Foundation for making this possible through programmatic and regranting support.

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7 months ago

so proud of this team!!! they're changing the way grants are sought, written, and funded. and such critical work - greenhouse gases this cycle, focused on methane. they funded us (+ Michael Konopka, USNA) to study methane monooxygenase (pMMO), potentially the key to remediating methane pollution.

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10 months ago
Preview
Exclusive: NIH to suspend funds for research abroad as it overhauls policy Move by US biomedical agency threatens thousands of projects on infectious diseases, cancer and more.

ok rumors were true all along: www.nature.com/articles/d41...

steady slide into fascism.

what are ppl hearing about US-based researchers with foreign citizenship? I am hearing rumors that they are being targeted now. Sounds laughable but all too real in this hellhole

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11 months ago

GABA imaging classifies amacrine cell types in mouse retina! Aki and
@keisukeyonehara.bsky.social
are amazing! future goals include Gly imaging, 2-color Glu/GABA, more complete scRNA-seq/MERFISH mapped onto functional classes.

Super-fun collaboration! @janeliagenie.bsky.social

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11 months ago

ouch, I'm so sorry. but yes, consistent with I'm hearing. Most disconcertingly, it wasn't even CURRENT intl collabs; PREVIOUS intl collabs seemed enough to kill it. Very chilling.

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11 months ago

I don't know yet but will ask

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11 months ago

hey, what are ppl hearing about NIH/NSF grants with international collaborators? A colleague has their NIH grant withheld bc it had intl collabs. are other ppl hearing this? any place to find info on this? thanks!

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1 year ago
This is a cartogram map of the United States depicting land use by different categories. The map distorts state shapes to represent proportional land usage. Key land use types include cow pasture/range (covering much of the central U.S.), private and federal timberland in the Pacific Northwest, corporate timberland in the Southeast, and urban housing/commercial areas in the Northeast. Other categories include agriculture (livestock feed, wheat exports, ethanol/biodiesel, cotton), protected lands (national parks, federal wilderness, state parks), and infrastructure (railroads, airports, highways). Additional specialized land uses include wildfires, golf courses, Christmas tree farms, and maple syrup production.

I think about this map a lot.

www.bloomberg.com/graphics/201...

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