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Sumin Kim

@suminkim.bsky.social

Postdoc in Hansen Lab @MIT Fascinated by the nucleus, neurons, and imaging πŸ”¬ she/her

104 Followers  |  120 Following  |  4 Posts  |  Joined: 24.10.2023  |  1.624

Latest posts by suminkim.bsky.social on Bluesky

Thank you!!

28.05.2025 01:46 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thanks Mara!

28.05.2025 01:46 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thank you!

28.05.2025 01:46 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Excited to be a part of this amazing community!

27.05.2025 18:53 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 2    πŸ“Œ 0
Preview
Genome structure mapping with high-resolution 3D genomics and deep learning Gene expression is often regulated by distal enhancers through cell-type-specific 3D looping interactions, but comprehensive mapping of these interactions across cell types is experimentally intractab...

Excited to share my first preprint from the @andersshansen.bsky.social lab! It's got genomics, AI, and biology - all wrapped up in a great paper. Also very grateful to my amazing collaborator, Fan, for all his hard work. Please check it out and let me know what you think!
tinyurl.com/bdfvtd6f

07.05.2025 18:50 β€” πŸ‘ 29    πŸ” 6    πŸ’¬ 1    πŸ“Œ 2

(1/n) New preprint from @claricehongky.bsky.social
Fan Fang Varshini Ramanathan in collab w Jie Liu.

Q: How do we get ultra-high-res 3D genome maps?

A: New deep learning model, Cleopatra.

Cleo trains on Micro-C, fine-tunes on RCMC, and predicts genome-wide 3D maps at ultra-high resolution.

07.05.2025 20:54 β€” πŸ‘ 65    πŸ” 23    πŸ’¬ 3    πŸ“Œ 0
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(1/n) Thread @matteomazzocca.bsky.social @domenicnarducci.bsky.social Simon Grosse-Holz @jessematthias.bsky.social preprint

Q: how does chromatin move?

Using MINFLUX, SPT & SRLCI, we track chromatin dynamics across 7 orders of magnitude in time to provide answers www.biorxiv.org/content/10.1...

15.05.2025 12:37 β€” πŸ‘ 69    πŸ” 22    πŸ’¬ 2    πŸ“Œ 1
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Super excited to share my first preprint from @andersshansen.bsky.social Lab! We used MINFLUX to track chromatin (H2B-Halo and Fbn2 locus) at an unprecedented 200β€―ΞΌs, then combined it with SPT to span ΞΌs-minutes (H2B) or SPT & Super-Res Live-Cell Imaging (SRLCI) to span ΞΌs-hours (Fbn2)

14.05.2025 17:58 β€” πŸ‘ 28    πŸ” 11    πŸ’¬ 1    πŸ“Œ 4

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