Tjibbe Donker

Tjibbe Donker

@tjibbed.bsky.social

Infectious Diseases Modeller at University Hospital Freiburg, working on antibiotic resistance, hospital-acquired pathogens, and patient referral networks. www.tjibbedonker.nl

636 Followers 398 Following 62 Posts Joined Oct 2023
1 day ago

Two postdoc positions open at SUMOC (Sorbonne Université | INSERM), Paris, within the EPIcx lab.

🦠 Network epidemiology of healthcare-associated infections (ARCANE)
🧠 Coupled behavior–disease modeling (PREVIX)

2-y positions | Start June 2026
#epidemiology #networks #matrices

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2 weeks ago

I found this profoundly difficult to read, also because I have a 7-year-old daughter, and I would gladly spend eternity in hell to prevent this happening to her.

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3 weeks ago

That's amazing!

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3 weeks ago
YouTube
Kate Bush & Rowan Atkinson Do Bears......... YouTube video by alfienoaks

The best Kate Bush 😉:

youtu.be/LswKizinfJY?...

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1 month ago

Cool graph, particularly from the point of view of the physics of accelerating / regenerative braking.

One question though: what's the basis of the (regression) lines through the data points? Especially for ICE-petrol it looks really weird, with most of the data points below the line.

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1 month ago

Fun fact: the first draft of this paper was written November 2019, but somehow, something came in between.

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1 month ago
Please wait whilst we redirect you All content on this site: Copyright © 2026 Elsevier B.V., its licensors, and contributors. All rights are reserved, including those for text and data mining, AI training, and similar technologies. For all open access content, the relevant licensing terms apply.

As part of the NeWIS project, we wrote a commentary in @cmijournal.bsky.social on the need for hospital network reconstruction for the control of antimicrobial resistance.

"Towards a Europe-wide reconstruction and analysis of hospital networks"

authors.elsevier.com/a/1mXF1,RGPg...

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1 month ago

Nouvelle publication, avec la participation de Laura Temime, directrice du laboratoire MESuRS, sur les réseaux de soins et la prévention de la propagation des bactéries multirésistantes (RAM).

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2 months ago
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The Met Office seems to grasp the gravity of the situation.

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2 months ago
Preview
Hang the DJ - Wikipedia

This is *literally* a Black Mirror episode.

en.wikipedia.org/wiki/Hang_th...

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2 years ago
Dave Grohl, throughout the years.

I don't think I've ever talked on Bluesky about why I hate the Foo Fighters and Dave Grohl.

Don't read any further unless you're prepared for uncomfortable truths about the "Nicest Guy in Rock", and his very substantial body count & subsequent cover-up.

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3 months ago

Years ago, my mother had the chance to join one of his workshops. Together, we prepared by going through the available "scientific literature".

So, immediately she started asking the right questions...

After 10 minutes, she was kicked out because "this was clearly not for her"

So proud of her

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3 months ago
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This motherfracker wants us to prove a negative. In science, you can prove a negative about causation by showing the causal pathway does not exist.

“Vaccines do not cause autism” has been proven in every scientifically meaningful sense. Read on.

Thread [1/9]

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3 months ago
CDC disinformation about the link between autism and vaccines

The CDC updated its vaccine page to claim "vaccines do not cause autism" is "not evidence-based" and studies were "ignored." This is an outrage. Decades of research have found no link. This isn't science, it's RFK Jr. using the CDC as propaganda. Children will die because of this.

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3 months ago
figure showing estimated proportion of cases in clusters, for each site. range from 0.04 to 0.93, mean estimate in random effects model is 0.57 [0.46,0.68]

#AMR #Klebsiella cause >100,000 neonatal deaths globally each year.

Our new preprint shows more than half of #Klebsiella pneumoniae neonatal sepsis cases in African and South Asian are nosocomial, acquired through transmission in neonatal units. #WAAW

doi.org/10.1101/2025...

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4 months ago
University of Freiburg

🌳💻 Scientific Programmer position (7 years, TVöD E13)

Play an important role in the Cluster by making a contribution to the integration of process models for all components of the forest system, and by helping to shape research in this area.

📅 Apply by 3 Dec 2025

🔗 uni-freiburg.de/en/job/00004...

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4 months ago
University of Freiburg

🌳📢 Modeling Coordinator position (7 years, TVöD E13)

Help coordinate modeling activities, develop synergies and collaborations, as well as contribute to socio-ecological modeling research, including your own studies.

📅 Apply by 3 Dec 2025

🔗 uni-freiburg.de/en/job/00004...

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4 months ago

Exciting news from the Future Forests Cluster of Excellence at the University of Freiburg (@uni-freiburg.de)! 🌲🌳

Applications are invited for two (7-year) positions in the Socio-Ecological Systems Modeling Lab of the Cluster:

1️⃣ Modeling Coordinator
2️⃣ Scientific Programmer

Find details below 👇

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4 months ago

“Basically, no matter what anyone tells you, a plug in hybrid is just a more complex petrol car. You are always either hauling a useless engine around or hauling a useless battery around. It will require the same amount of servicing as any petrol or diesel vehicle, it has 1000s more components…

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4 months ago

Sounds plausible.

And looks beautiful, btw.

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4 months ago

Both my plantnet app and Google lens say it's a tobacco species... Weird. I'd love to hear from someone with proper botanical knowledge indeed.

Or see what this turns into.

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4 months ago
Director, Center for Pathogen Bioinformatics The Centre for Pathogen Bioinformatics (CPB) is a unit of SIB which offers expertise and services in pathogen bioinformatics, computational molecular epidemiology and related multi-site project manage...

Open position at the Swiss Institute of Bioinformatics:
We are looking for a Director of the Center of Pathogen Bioinformatics
apply.refline.ch/499599/0346/...
I am in the Center's steering board together with fantastic colleagues (Emma Hodcroft @firefoxx66.bsky.social, Richard Neher @neher.io, and

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4 months ago

Herr Blume sorgt dafür, dass alle Porsche-Fahrer in 35 Jahre ein H-Kennzeichen führen können.

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5 months ago
YouTube
Tom Lehrer - National Brotherhood Week YouTube video by The Tom Lehrer Wisdom Channel

Tom Lehrer said some wise words about that
www.youtube.com/watch?v=aIlJ...

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7 months ago
Photo of Tom Lehrer

My last living musical hero is still my hero but unfortunately no longer living. RIP to the great, great Mr. Tom Lehrer.

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7 months ago

"The possibility of prompt injection" was not on my list of the dangers of using LLMs for peer review" ( www.sciencedirect.com/science/arti... ).

Then again, I didn't actually include a list, because I didn't use AI to write the bloody text.

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8 months ago

To be fair, it's Orange for the same reason.

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8 months ago

PhD position (Rennes, France)
Model hospital preparedness for infectious disease crises (PReViX project)
with @pascalcrepey.bsky.social @Nicolas @Sirven @mtsofonea.bsky.social
at Ecole des Hautes Etudes en Santé Publique (EHESP)
More details: http://iddjobs.org/jobs/2330

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8 months ago

Yes, that would also be my guess

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8 months ago

Nothing could be more flattering, thank you so much @gmknght.bsky.social for highlighting our paper!
We found that for some #bacteria 🧫 , connectivity between hospital wards is as / more important for explaining #AMR as antibiotic consumption, especially for highly resistant 🏥 endemics

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