To turn spatial data into a 3D object, check our protocol (open source, napari plug-in). @guignardlab.bsky.social @adrianobolondi.bsky.social @ibdm.bsky.social
For example, if you have spatial RNA-seq as sections, you can align them automatically to analyse directly in 3D.
bio-protocol.org/e5607
Follow IBDM for exciting science on Bluesky: @ibdm.bsky.social 🔬🙌
Congratulations @alicegros.bsky.social for this great PhD and thanks a lot for these great years!
I’m so glad you were my first PhD student, I really enjoyed our collaboration. I can’t wait to see what you will do next!
Congratulation @alicegros.bsky.social, @jules-vanaret.bsky.social, @dunsingvalentin.bsky.social et al. for this great collaborative work!
And thanks you, @shamtlili.bsky.social and @pflenne.bsky.social for this really nice collaboration!
Register for #sfbd #devbio #ShapingLife3 meeting in sunny Cassis by the sea. If you like dev biology, join us! speakers include @justinmcrocker.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social and more @maitrejl.bsky.social
Do you work on cell tracking or with cell tracking? Let's meet at the #MMC2025 conference!
We're hosting a Frontiers session on "Tracking in Life Sciences" there. If you're working on cell tracking or any form of biological tracking, this is your chance to share your insights and innovations. 👇
📣Exciting meeting ahead!
Join us next June in beautiful Cassis for #ShapingLife3!
www.atoutcom.com/shaping-life/
@justinmcrocker.bsky.social @mhverlhac.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social @sfbd.bsky.social
We just released and uploaded a new version of *Mastodon*, the large-scale tracking and track-editing framework for large, multi-view images.
Mastodon is available via Fiji, via a dedicated update site.
mastodon.readthedocs.io/en/latest/do...
Below is a thread that survey some of the novelties ⏬️
The IBDM is recruiting a new group leader!
Come and join us!!
👉 Registration to #SHAPINGLIFE3 is now open !
This new issue of the French Developmental Biology Society international meeting will be held in the small village of Cassis near Marseille June 3-6 2025. Lots of cool science and paradise location.
www.atoutcom.com/shaping-life...
@sfbd.bsky.social
It’s official 🎉 I am excited to share that I will start my lab this spring at the Max Planck Institute for Immunobiology and Epigenetics @mpi-ie.bsky.social in beautiful Freiburg 🤩🗻☀️ I am looking forward to new collaborations and working with the fantastic community in Freiburg & its surroundings!
Openings for PhD studentships at CENTURI, incl a collaborative project with @guignardlab.bsky.social. Apply if you are interested in 3D computational modelling of mouse embryonic processes!
More info and online application 👉 centuri-livingsystems.org/application-...
@univ-amu.fr @ciml.bsky.social
I wrote some thoughts about why peer review matters
It shapes scientific standards, maintains field coherence & trains new researchers
Yes, it needs improvement—but it's the glue that holds scientific progress together
briscoelab.org/2024/12/11/i...
Discover the winners of the FBI Image Contest 2024🔬
🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille)
🥈Place: Dalia El Arawi (IBDM)
🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM)
🏆 Congratulations to them!
👏 A big thank you to all the participants!
🎶 🪩 🪩 End of the week #segmented #organoids dancing 🪩 🪩 🎵! By @alicegros.bsky.social 🤗.
I really like them!
🎓Looking to pursue a #PhD in the field of #BiomedicalResearch? Join us for a fully-funded #PhDposition! Apply by March 3, 2024
👉 www.mdc-berlin.de/phd
#PhDjob #PhDlife #ScienceCareer #mdcBerlin @www.helmholtz.de
🚨🚨Still looking for a postdoc and a PhD for this spectacular project involving computer vision and spatial transcriptomics!
Please RT 🙂
📣Join us in Marseille for an exciting postdoc | PhD opportunity at the crossroads of Computer Science and DevBio! Dive into a collaborative HFSP funded project, unravelling embryo bilateral symmetry. 🦐
You are curious and creative: contact us!
You know someone: tell them!🤓
www.guignardlab.com/jobs
