Distribution of capsule and O types in Klebsiella pneumoniae causing neonatal sepsis in Africa and South Asia: meta-analysis of genome-predicted serotype prevalence and potential vaccine coverage https://www.medrxiv.org/content/10.1101/2025.06.28.25330253v1
30.06.2025 16:43 — 👍 1 🔁 2 💬 0 📌 0
🚨 Last chance to sign up for an online space at Thursday's symposium on target trial emulation (TTE) and other frameworks
Sign up 🔽
23.06.2025 13:21 — 👍 1 🔁 2 💬 0 📌 0
Wonderful presentation @nisbetalice.bsky.social !
25.06.2025 09:32 — 👍 2 🔁 0 💬 0 📌 0
Coming up next at #I3S #I3Scongress is @nisbetalice.bsky.social showing a summary of 20 years of #typhoidal #Salmonella in England & Wales. She is excited to present here as she prepares this for publication and as this is her first international talk. We are hanging around if you have any Qs.
25.06.2025 09:30 — 👍 10 🔁 6 💬 1 📌 0
Outbreak of Ceftriaxone-Resistant <em>Salmonella enterica</em> Serovar Typhi, Bangladesh, 2024
Ceftriaxone-Resistant <em>Salmonella</em> Typhi, Bangladesh
One ceftriaxone-resistant #typhoid case last year set us on a path that is now live on Emerging Infectious Diseases.
47 cases in months, resistance rose from 0 to 5%. We spoke with patients, sequenced samples. 4.3.1.2.B1 lineage+blaCTX-M-15 on pCROB1. #AMR #PublicHealth
wwwnc.cdc.gov/eid/article/...
23.06.2025 16:19 — 👍 2 🔁 6 💬 1 📌 0
🥇 Congratulations to @msmicrobiocode.bsky.social
who was one of the winners of the @lshtmamrcentre.bsky.social Publication Prize
She received the Staff Prize for her work analysing AMR typhoid infections in Bangladesh, Nepal, and Malawi
Find out why 🔽
www.lshtm.ac.uk/research/cen...
12.05.2025 08:59 — 👍 9 🔁 4 💬 2 📌 0
A huge thank you to all involved - especially members of the Global Typhoid Genomics Consortium, @katholt.bsky.social , @meganecarey.bsky.social , @louisecerdeira.bsky.social, and Vandana Sharma!
09.05.2025 13:18 — 👍 4 🔁 2 💬 0 📌 0
📣 🎉 Congratulations to Ms Gladys and @msmicrobiocode.bsky.social on winning our 2025 Publication Prize at @lshtm.bsky.social 🏆
Read more about their winning papers and impactful AMR research🔬 👇
bit.ly/4iM7uCh
06.05.2025 13:07 — 👍 12 🔁 4 💬 1 📌 0
@msmicrobiocode.bsky.social won the Staff Prize for her work revealing that most AMR typhoid infections in Bangladesh, Nepal, and Malawi are driven by ongoing local transmission of existing resistant strains—not new variants.
06.05.2025 13:07 — 👍 8 🔁 3 💬 1 📌 0
Good luck ☺️
02.02.2025 11:42 — 👍 1 🔁 0 💬 0 📌 0
Home
A tool for generating consensus long-read assemblies for bacterial genomes - rrwick/Autocycler
New year, new assemblies!
I'm excited to announce Autocycler, my new tool for consensus assembly of long-read bacterial genomes!
It's the successor to Trycycler, designed to be faster and less reliant on user intervention.
Check it out: github.com/rrwick/Autoc...
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31.12.2024 23:43 — 👍 156 🔁 97 💬 2 📌 3
Biochemist 🧪| Empowering Life Scientists and Science Communicators to Achieve Their Career Goals | UCLA PhD + NIH Alum | Pharma R&D @GSK + @AstraZeneca 💊 | #SciComm Director ✍️| Career Coach | Star Trek | Sherlock Holmes | 🎹 | https://larrymillerphd.com
Researcher at Uni Cambridge, working on infectious diseases, bacterial evolution, Pseudomonas aeruginosa, ML and AMR.
Research Fellow in the @halllab.bsky.social at @unibirmingham.bsky.social | microbiomes | microbial genomics | @amiposts.bsky.social OHAG member👩🏼💻 💩 🧬
The Australian Bioinformatics and Computational Biology Society Inc. Promoting the science and profession of bioinformatics
https://www.abacbs.org
Research fellow @lshtm.bsky.social working on malaria genomics and transmission blocking drugs | 🇧🇪 in 🇬🇧
PhD student at Cambridge | AMR | genomic surveillance | microbiome
Assistant Professor at Tufts Medicine studying microbes, brains, and the immune system 🚽🦠🧠
Fermenter, gardener, Zen Buddhist. Ask me about #julialang!
🎙️: https://audiommunity.org
🌎: https://blog.bonham.ch
💻: https://GitHub.com/kescobo
Bioinformatics Scientist @theiagen.bsky.social
Likely swimming in a sea of pathogen genomes 🏊🧬 or riding my bike 🚴
Public Health | Infectious Diseases | Bioinformatics | Software Dev
Group leader in the Virology Department at Institut Pasteur
Algae enthusiast, Associate Professor @UniofExeter, joint appointment @thembauk #ERC-CoG, former #NERC IRF
Algal ecophysiology | signalling | microbiome | molecular microbiology | diatoms!
Postdoctoral research associate at University of Cambridge | infectious diseases genomics
Researcher (PI)
Ross University School of Veterinary Medicie
PhD student at the Quadram Institute.
Antimicrobial resistance, foodborne pathogens, bioinformatics, and metagenomics.
Director of Research, CNRS | Microbial Ecologist | incoming EIC for American Society for Microbiology journal #mSystems | ERC #MicroRescue
Scientist @icmcsic.bsky.social #Barcelona: aquatic microbes, ecosystems, genomics, evolution, AI, bioinformatics & SciFi 🇪🇸🇦🇷 https://log-lab.barcelona
Interim Pro-Vice-Chancellor and Executive Dean - Professor of Veterinary Microbiology and Pathology, University of Surrey. Chair of Trustees for Humanimal Trust.
