Cameron Thrash

Epistasis and co-adaptation in bacterial genome evolution - Nature Reviews Genetics Bacterial genome evolution is shaped by epistasis, which can constrain or promote specific evolutionary paths. The authors review how integrating the effects of epistatic interactions into population-...

Epistasis and co-adaptation in bacterial genome evolution www.nature.com/articles/s41... #jcampubs

Bacterial Communities in Sand and Seawater of Northern Gulf Coast Beaches: Temporal, Spatial, and Environmental Influences Bacterial communities in sand and seawater collected every 3 months from 10 beaches along the Mississippi Gulf coast were fundamentally different from each other. Bacterial communities in both habita...

Bacterial Communities in Sand and Seawater of Northern Gulf Coast Beaches: Temporal, Spatial, and Environmental Influences enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs

Iron Reduction in Members of the Family Melioribacteraceae: Metabolic Properties and Genetic Determinants of Extracellular Electron Transfer - Microbiology Abstract Using our unique collection of all currently available cultured members of the family Melioribacteraceae, as well as a new species of the genus Melioribacter isolated from an aquifer of the Y...

Iron Reduction in Members of the Family Melioribacteraceae: Metabolic Properties and Genetic Determinants of Extracellular Electron Transfer link.springer.com/article/10.1... #jcampubs

A novel North Sea ammonia-oxidizing archaeon Nitrosarchaeum marinum leverages a high abundance of transport systems to grow over a wide salinity range Isolation and characterization of a novel North Sea ammonia oxidizing archaeon, Nitrosarchaeum marinum T12, reveals an adaptation to a broad salinity under

A novel North Sea ammonia-oxidizing archaeon Nitrosarchaeum marinum leverages a high abundance of transport systems to grow over a wide salinity range academic.oup.com/femsec/artic... #jcampubs

Kinetic Plasticity of Nitrite-Oxidizing Bacteria Containing Cytoplasmic Nitrite Oxidoreductase academic.oup.com/ismej/advanc... #jcampubs

Potential Contribution of Microbial Interaction to Stochasticity of Microbiota Assembly academic.oup.com/ismecommun/a... #jcampubs

Comparative analysis of prokaryotic communities, hydrography, and biogeochemistry in Atlantic vs non-Atlantic influenced Svalbard fjords link.springer.com/article/10.1... #jcampubs 🌊

Iron and nitrogen stress controls summertime biogeochemistry in the high‐latitude North Atlantic aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs 🌊

Amplicon and metagenomic data from fumarole-associated geothermal features of Hawaiʻi www.biorxiv.org/content/10.6... #jcampubs

Calibrating for absolute microbiome abundances without spike-ins www.biorxiv.org/content/10.6... #jcampubs

DECODE: deep learning-based common deconvolution framework for various omics data www.nature.com/articles/s41... #jcampubs

Single-cell heterotrophic activity in deep-ocean prokaryotic communities quantified by BONCAT and microautoradiography academic.oup.com/ismecommun/a... #jcampubs 🌊

Dissolved organic matter specialisation drives temporal dynamics of simplified bacterial communities in a microcosm experiment academic.oup.com/ismecommun/a... #jcampubs

Sulfur disproportionation occurs globally across anoxic habitats and has multiple mechanisms of independent evolutionary origin academic.oup.com/ismej/advanc... #jcampubs

Novel connections between B-vitamins and microbial communities along biogeochemical gradients in a large temperate estuary www.biorxiv.org/content/10.6... #jcampubs 🌊

Shear flow promotes bacterial growth and shapes spatial gradients by rapidly replenishing scarce nutrients journals.asm.org/doi/full/10.... #jcampubs

Nanopore sequencing reaches amplicon sequence variant (ASV) resolution www.biorxiv.org/content/10.6... #jcampubs

In situ interrogation of microorganisms mediating hydrocarbon degradation journals.asm.org/doi/full/10.... #jcampubs

Quantitative metagenomics using a portable protocol journals.asm.org/doi/full/10.... #jcampubs

Leveraging DNA and RNA oscillatory dynamics to investigate the ecology and physiology of a freshwater microbial community www.biorxiv.org/content/10.6... #jcampubs

Nitrous oxide (N2O) in the sea surface microlayer and underlying water during a phytoplankton bloom: a mesocosm study Abstract. Nitrous oxide (N2O) is an important climate-relevant atmospheric trace gas. The open and coastal oceans are a major source for atmospheric N2O. However, its production and consumption pathwa...

Nitrous oxide (N2O) in the sea surface microlayer and underlying water during a phytoplankton bloom: a mesocosm study bg.copernicus.org/articles/23/... #jcampubs 🌊

Clonal-aggregative multicellularity tuned by salinity in a choanoflagellate - Nature The choanoflagellate Choanoeca flexa forms motile and contractile cell monolayers purely clonally, purely aggregatively or through a combination of both processes depending on environmental condi...

Clonal-aggregative multicellularity tuned by salinity in a choanoflagellate www.nature.com/articles/s41... #jcampubs

Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity - Nature Reconstructing microbial genomes from 820 reef-building corals collected at 99 reefs across 32 islands throughout the Pacific Ocean highlights the importance of conserving coral reefs as vital reservo...

Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity www.nature.com/articles/s41... #jcampubs 🌊

So happy that Episode #124 of #MattersMicrobial is available! Dr. Anne Thompson joins the #QualityQuorum to chat about the marine microbial forest & its predators! Please give a look or listen? Grateful for every view! @unipugetsound @asmicrobiology @microbetv.bsky.social

youtu.be/MFIRVti0YrI?...

Kineochelins - a novel group of siderophores from an Antarctic bacterium www.biorxiv.org/content/10.6... #jcampubs

Variability in the relationship between ocean phytoplankton diversity and carbon biomass across methods and scales www.biorxiv.org/content/10.6... #jcampubs 🌊

Sampling microbial dynamics in the Salish Sea estuary: evaluating methods to capture cyanobacteria and cyanophage www.frontiersin.org/journals/mar... #jcampubs 🌊

Microbial Cohorts: Bringing Ecological Meaning to the Modularity Concept of Co-Occurrence Networks academic.oup.com/ismecommun/a... #jcampubs

Assessing Prokaryotic Benthic Communities in the Red Sea Prokaryotic benthic communities in the Red Sea are shaped by depth, latitude, and oxygen availability. Deep-sea communities exhibited low variance in OTU richness, while shallower communities showed ....

Assessing Prokaryotic Benthic Communities in the Red Sea enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs 🌊

Novel light-driven schizorhodopsins from Antarctic patescibacteria and cyanobacteria www.cell.com/biophysj/abs... #jcampubs