π± Highlighted research article:
Gene expression divergence following gene and genome duplications in spatially resolved plant transcriptomes
Fabricio Almeida-Silva & Yves Van de Peer
The Plant Cell, Volume 37, Issue 10, October 2025, koaf243 doi.org/10.1093/plce...
23.11.2025 00:45 β π 0 π 0 π¬ 0 π 0
𧬠In Brief:
Duplicated genes find their space: Spatial transcriptomics illuminates evolutionary fates
The Plant Cell, koaf265. doi.org/10.1093/plce...
23.11.2025 00:45 β π 0 π 0 π¬ 1 π 0
β¨ Excited to share our new In Brief article in The Plant Cell! Co-authored with Fabian and Bruno, our piece highlights work by Almeida-Silva and Van de Peer that uses spatial transcriptomics to uncover how gene and genome duplications shape plant evolution.
23.11.2025 00:45 β π 25 π 10 π¬ 1 π 1
π Excited to be speaking at the London Single Cell & Spatial Discovery Symposium this Thursday.
𧬠Looking forward to connecting with the single cell and spatial biology community and learning from the amazing 10x-perts.
08.10.2025 17:18 β π 2 π 0 π¬ 0 π 0
Why I recommend it:
β‘οΈ Joli reframes academic writing as a frequent, low-stress practice, rather than something tied only to deadlines.
β‘οΈ It reminded me that writing isnβt just about publishingβitβs also about thinking clearly, clarifying ideas, and enjoying the process.
27.09.2025 08:30 β π 1 π 0 π¬ 0 π 0
Weekend Reading Recommendation #1 π
β¨ Write No Matter What by Joli Jensen
Key takeaway: Writing can be frequent, low-stress, and even enjoyableβa daily practice, not just a deadline scramble.
π Iβd love to hear: Whatβs a book thatβs shaped how you work, learn, or create?
27.09.2025 08:30 β π 4 π 0 π¬ 1 π 0
New OA Article: "A single-cell rice atlas integrates multi-species data to reveal cis-regulatory evolution" rdcu.be/eHce3
Chromatin accessibility in rice & related grasses: how regulatory DNA elements evolve across cell types & species; identifying potential silencers.
19.09.2025 08:51 β π 25 π 15 π¬ 0 π 0
On my site, youβll find:
π¬ My research on plant organogenesis
π Publications
π€ Updates on conferences, talks & teaching
I hope it grows into a platform not just to showcase my work, but also to engage with the scientific community & beyond. π
15.09.2025 20:56 β π 0 π 0 π¬ 0 π 0
β¨ βDiscovery becomes impact when science is shared and communicated to inspire change.β
As scientists, we dedicate years to building knowledge. Having a hub helps communicate that work more widely β connecting with collaborators, students, & anyone curious about plant biology.
15.09.2025 20:56 β π 1 π 0 π¬ 1 π 0
π± Excited to share my new personal academic website! π minyaojhu.com
Inspired by the Nature Index article "Build-your-own website for scientists", I wanted to create a hub to present my research & foster collaborations.
15.09.2025 20:56 β π 6 π 1 π¬ 1 π 0
Excited to share our latest In Brief in The Plant Cell! π±β¨
With Dr. Chai Hao Chiu, we highlight Horta AraΓΊjo et al.βs discovery of AeRLCK2, a Receptor-Like Cytoplasmic Kinase that drives Nod-independent nodule formation in Aeschynomene evenia. doi.org/10.1093/plce...
19.08.2025 18:52 β π 6 π 2 π¬ 0 π 0
I'll also be sharing a poster on the same topic: 𧬠Poster #400-56
Come chat if you're interested in spatial transcriptomics, gene regulation, and legume symbiosis! See you here! πΏ
#PlantBio2025 #ASPB
26.07.2025 10:32 β π 6 π 2 π¬ 1 π 0
Excited to be speaking at #PlantBio2025! π±
𧬠Session: Transcription to Beyond!
π
Tue, July 29 | π 5:10 PM | πRoom 203CD
ποΈ High-Resolution Time-Resolved Spatial Transcriptomes and Gene Regulatory Atlas of Medicago Lateral Root and Nodule Organogenesis
26.07.2025 10:32 β π 13 π 2 π¬ 1 π 0
We highlight how nodules & lateral roots share regulatory pathways but evolved distinct organ identities. πΏWe also showcase emerging tools β single-cell and spatial transcriptomics, and advanced imaging β that are providing fresh insights into the regulation of nodulation. π§¬
28.06.2025 15:37 β π 1 π 1 π¬ 0 π 0
New review out in Current Opinion in Plant Biology!
βFrom roots to nodules: regulation of organogenesis in nitrogen-fixing symbiosisβ
Many thanks to Dr. Katharina Schiessl for inviting me to work on this! π
28.06.2025 15:37 β π 6 π 3 π¬ 2 π 0
We explore how plants adapt their developmental programs to form specialized organs β nodules, galls, haustoria β enabling mutualistic or parasitic symbioses.
Despite their differences, these organs share gene regulatory pathways, demonstrating the remarkable plasticity of plant development.
20.06.2025 08:23 β π 3 π 2 π¬ 0 π 0
π Excited to share our new review published in Trends in Plant Science, coauthored with Dr. Victor Hugo Moura de Souza & Dr. Katharina Schiessl!
π± From hosts to parasites: Hormones driving symbiosis-induced de novo organogenesis
π authors.elsevier.com/sd/article/S...
20.06.2025 08:23 β π 7 π 4 π¬ 1 π 0
Wang et al. reveal how plant glutamyl-tRNA reductases (GluTRs) drive heme biosynthesis in nodules, supplying both the plant and rhizobia, and coordinating metabolism to support symbiosis. π±
13.06.2025 21:12 β π 3 π 0 π¬ 0 π 0
π Iβm excited to share our latest In Brief article, co-authored with Dr. Raphael Ledermann, now published in The Plant Cell!
Division of Labour in the Nodule: Plant GluTRs Fuel Heme Biosynthesis for Symbiosis
doi.org/10.1093/plce...
13.06.2025 21:12 β π 2 π 1 π¬ 1 π 0
Postdoc in Molecular Palaeobotany and Evolution Group @ Uni of Edinburgh. Working on bryophytes and lycophytes, interested in how plants conquered land at the molecular level π±ππ΄σ §σ ’σ ³σ £σ ΄σ Ώ
MD FASN | Nephrologist = kidney doc | #PeritonealDialysis aficionado | #ClinicianScientist @ChariteBerlin | Ex-editorial fellow @JASN | #SingleCell | Determined to understand adaptation to kidney disease | #ERCStG
Plant cell/developmental biologist @RDP Lyon, loves cell edges, mechanics, and lateral roots
USDA NIFA Postdoctoral Fellow @UMass
Plant Genome Evolution | Grasses
Evolutionary biologist / bioinformatician
#EVOLF
#symbiosis
#algae
Enabling researchers to answer biologyβs hardest and most elusive questions with innovative #singlecell, #spatialbiology & #insitu technology.
Life science distributor for Australia & NZ that aims to ignite life science discovery through revolutionary technologies.
www.mscience.com.au
PhD student at UGent working on polyploidy, network biology, regulation of gene expression, and (plant) genome evolution. Proud father. Bookworm. #rstats developer.
π» almeidasilvaf.github.io
Junior professor at China Agricultural University. Fascinated by plant-microbe symbiotic interaction.
Researcher at Aarhus University
interested in plant-microbe interaction
PhD student at @ottlab.bsky.social studying root nodule symbiosis
Bringing together scientists to develop tools for creating a comprehensive understanding of the dynamic molecular organization of the plant cell.
[pron. /Jung-ow/]
Postdoc in the Patron Lab at Earlham Institute.
Studying plant science/synthetic biology.
APS is the premier society dedicated to high-quality, innovative plant pathology research.
www.apsnet.org
We report on the latest news in all fields of science. See also @snexplores.bsky.social
Postdoc fellow at Wageningen University
Gene regulatory mechanisms & plant development.
@ucdavis Alumni
First Gen. He/Him.
Assistant Professor @UU_Plants | roots, monocots, stress resilience, magic microbes
Senior computational scientist in Fishell lab at the Broad Institute and HMS. Ph.D. and B.S. in Bioinformatics. Interests: #SingleCell #MachineLearning #Neuron
https://genecell.github.io
https://x.com/artofbiology