Indigo V.L. Rose's Avatar

Indigo V.L. Rose

@ivlrose.bsky.social

Uses functional genomics to study astrocytes in neurodegenerative disease πŸ§ͺ. Neuroscience PhD candidate at UCSF (Kampmann Lab). He/him πŸ³οΈβ€πŸŒˆ

886 Followers  |  605 Following  |  31 Posts  |  Joined: 13.10.2024  |  2.1805

Latest posts by ivlrose.bsky.social on Bluesky

Preview
Astrocyte specification in the mouse septum is shaped by both developmental origin and local signals - Nature Neuroscience The relative contribution of intrinsic and extrinsic factors to astrocyte heterogeneity is unknown. Using heterotropic transplantation of septal astrocytes with distinct lineage origins, we show that ...

Cool astrocyte paper!

29.07.2025 16:40 β€” πŸ‘ 23    πŸ” 7    πŸ’¬ 0    πŸ“Œ 0
National Cancer Institute projection of a 4% pay line in FY2026.

National Cancer Institute projection of a 4% pay line in FY2026.

Good grief, the US National Cancer Institute projects it will fund only one in 25 RO1 grant applications in 2026. This is massively defunding cancer research. Despicable vandalism. www.cancer.gov/grants-train...

24.07.2025 10:32 β€” πŸ‘ 304    πŸ” 153    πŸ’¬ 6    πŸ“Œ 19
Post image

Tenure-track faculty search of the UCSF Biochemistry & Biophysics Department is open for applications!

We are looking for creative, innovative scientists asking fundamental questions in any area of biology.

Join our vibrant, collaborative, and supportive community!

aprecruit.ucsf.edu/JPF05702

23.07.2025 22:51 β€” πŸ‘ 83    πŸ” 68    πŸ’¬ 1    πŸ“Œ 1

Astrocytes connect specific brain regions through plastic gap junctional networks https://www.biorxiv.org/content/10.1101/2025.07.18.665573v1

22.07.2025 19:15 β€” πŸ‘ 14    πŸ” 4    πŸ’¬ 1    πŸ“Œ 4
Preview
Higher resolution pooled genome-wide CRISPR knockout screening in Drosophila cells using integration and anti-CRISPR (IntAC) - Nature Communications Genome-wide CRISPR screens map how genes support survival and contribute to diverse biological functions. Here, the authors use antiCRISPR to enhance genome-wide CRISPR screening in Drosophila and gen...

Pooled #CRISPR screens are a staple of functional genomics in mammalian cells. Yet somehow in the best genetic modelβ„’ no equivalent system was available. Until now! The @perrimonlab.bsky.social lab now presents efficient pooled CRISPR screening in #Drosophila cells.

www.nature.com/articles/s41...

17.07.2025 18:04 β€” πŸ‘ 17    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Look at that lovely single layer of astrocytes on the retinal surface!

27.06.2025 12:48 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Still the ggoat

11.06.2025 01:34 β€” πŸ‘ 36    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Maybe, idk. In previous labs I’ve used decades old ultracentrifuges and rotors without issue. This one just feels like a cash grab

07.06.2025 18:38 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Exactly! It feels like pure extortion on the part of the company

07.06.2025 16:04 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Post image

Today I learned that ultracentrifuge rotors expire?? And need to be repurchased periodically? These things still feel brand new and should last decades...

06.06.2025 19:23 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
The side of a box of Parafilm that features the flask, dish, and beaker. Text has been added under them. The flask is labelled chemistry, the dish biology, and the beaker jam making. Jam making is written in a different handwritten font

The side of a box of Parafilm that features the flask, dish, and beaker. Text has been added under them. The flask is labelled chemistry, the dish biology, and the beaker jam making. Jam making is written in a different handwritten font

At times like these it's important to remember the 3 branches of science

26.05.2025 22:04 β€” πŸ‘ 76    πŸ” 22    πŸ’¬ 3    πŸ“Œ 1
GADD45G operates as a pathological sensor orchestrating reactive gliosis and neurodegeneration Shen et al. identify GADD45G as an astrocytic sensor of diverse pathological stimuli and show that it drives reactive gliosis, neuroinflammation, and synapse loss through cell-autonomous and -nonautonomous mechanisms. Conversely, GADD45G inhibition mitigates histological and behavioral pathology in an Alzheimer’s disease model, highlighting it as a potential therapeutic target.

Online now:

22.05.2025 23:08 β€” πŸ‘ 0    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Preview
Contrary to Clear, Verifiable Facts, Secretary Kennedy Continues to Repeat Harmful Myths About Alzheimer’s and Dementia Research The Alzheimer's Association calls on HHS Secretary Kennedy to stop dangerous fabrications about the state of Alzheimer’s and dementia research.

www.alz.org/news/2025/ke...

20.05.2025 19:01 β€” πŸ‘ 46    πŸ” 28    πŸ’¬ 0    πŸ“Œ 3
Preview
Private funder HHMI pauses postdoc fellowship As HHMI pauses Hanna Gray fellowship applications, opportunities for young scientists shrink further, making them look overseas.

"to run a contest that you end up not funding as a private organization at this time is… both extremely wasteful of these people’s time, and just devastating in terms of morale."

I spoke with @aniloza.bsky.social at STAT today about HHMI's decision not to fund this round of Hanna Gray applicants.

19.05.2025 22:36 β€” πŸ‘ 199    πŸ” 66    πŸ’¬ 4    πŸ“Œ 6
A graphical abstract for the linked paper.  It depicts an adorable calico cat on a pink background. There are two caption bubbles pointing to the cat: one black and the other orange. These two bubbles respectively contain depictions of the ARHGAP36 gene in both orange and black/brown fur expression.

A graphical abstract for the linked paper. It depicts an adorable calico cat on a pink background. There are two caption bubbles pointing to the cat: one black and the other orange. These two bubbles respectively contain depictions of the ARHGAP36 gene in both orange and black/brown fur expression.

The mutation responsible for orange coloration in domestic cats has been identified! This effect in ARHGAP36, an X-linked gene, explains why male cats are more likely to be orange. πŸ§ͺ

www.cell.com/current-biol...

15.05.2025 23:34 β€” πŸ‘ 61    πŸ” 14    πŸ’¬ 1    πŸ“Œ 4

It’s quite the dance!

15.05.2025 04:21 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

My ongoing request:

If your NSF or NIH grant was terminated--whether at Harvard or elsewhere--please report it here.

NSF: grant-watch.us/submit-nsf.h...

NIH: grant-watch.us/submit-nih.h...

Our trackers are actively used in lawsuits and are often the only record that terminations ever occurred.

14.05.2025 14:22 β€” πŸ‘ 443    πŸ” 405    πŸ’¬ 16    πŸ“Œ 16

P.S. - 51 weeks a year this is a science account, but for one glorious week we're talking Eurovision!

14.05.2025 02:48 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Tommy Cash - Espresso Macchiato | Estonia πŸ‡ͺπŸ‡ͺ | Official Music Video | #Eurovision2025
YouTube video by Eurovision Song Contest Tommy Cash - Espresso Macchiato | Estonia πŸ‡ͺπŸ‡ͺ | Official Music Video | #Eurovision2025

Not sure how it made it through the Semifinal 1, but I'm so glad it did! #Eurovision www.youtube.com/watch?v=5MS_...

14.05.2025 02:47 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
The Gleichman lab

Thrilled to announce that my lab is now open at Ohio State! We study astrocytes as gene therapy targets for brain repair after ischemic stroke and in vascular dementia, developing new viral tools along the way. If you're interesting in joining or collaborating, please reach out!
gleichmanlab.com

01.05.2025 20:24 β€” πŸ‘ 71    πŸ” 29    πŸ’¬ 10    πŸ“Œ 2
Post image

🧬The interactive RNA sequencing resource from the Daneman Lab is now live!🧬

Built by Ben Gastfriend, this user-friendly tool lets you explore gene expression changes across multiple conditions!

Check it out here: danemanlab.shinyapps.io/bbbtranscrip...

04.05.2025 16:52 β€” πŸ‘ 8    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
Summer Research Program in Neuroscience & Computation
For undergrads interested in exploring the brain and learning how to code
No prior experience necessary!
June - August 2025
UCSF Mission Bay campus
25-30 hours/week commitment
Learn more & apply:
http://tiny.cc/ucsfcompneuro/
Students from backgrounds historically underrepresented in STEM are encouraged to apply!

Summer Research Program in Neuroscience & Computation For undergrads interested in exploring the brain and learning how to code No prior experience necessary! June - August 2025 UCSF Mission Bay campus 25-30 hours/week commitment Learn more & apply: http://tiny.cc/ucsfcompneuro/ Students from backgrounds historically underrepresented in STEM are encouraged to apply!

New opportunity for Bay Area undergrads to gain computational neuroscience exposure and training!

I’m teaming up with @neuronush.bsky.social to offer this to students in our communities πŸ’•πŸ§ πŸ§ͺ

Please share with any students who might be interested!

Tiny.cc/ucsfcompneuro

03.05.2025 02:58 β€” πŸ‘ 44    πŸ” 35    πŸ’¬ 2    πŸ“Œ 2

Huge opportunity for postdocs gearing up for an academic job search, hosted by @stanford-chemh.bsky.social @berkeleymcb.bsky.social and UCSF!

25.04.2025 23:46 β€” πŸ‘ 51    πŸ” 34    πŸ’¬ 0    πŸ“Œ 0

They’re beautiful!

16.04.2025 15:26 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

New preprint evaluating the recent claim of epigenetically regulated immune memory in astrocytes.

We believe this finding was likely artifactual, resulting from immune cell contamination & cell type mis-annotation across multiple transcriptomics experiments:

08.04.2025 16:26 β€” πŸ‘ 16    πŸ” 4    πŸ’¬ 0    πŸ“Œ 1

I saw a cell that looked just like him! Let me find it…

04.04.2025 03:22 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Immunocytochemistry micrograph showing cells appearing to make little faces. Some are aghast and some are just chilling with little sunglasses.

Immunocytochemistry micrograph showing cells appearing to make little faces. Some are aghast and some are just chilling with little sunglasses.

All the little cells are making faces at me

03.04.2025 22:35 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Post image Post image

Congratulations Dr. @parkergrosjean.bsky.social! πŸŽ“πŸŽ‰πŸŽ‰πŸŽ‰

Thank you for your contributions to the Kampmann lab & UCSF - combining AI/ML with functional genomics to uncover regulators of neuronal activity.

We are missing you already - but excited for your next adventures at @insitro.bsky.social!

01.04.2025 00:36 β€” πŸ‘ 13    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Preview
UCSF Loses Top Heart Surgeon Over Trump’s Hostility Toward Canada | KQED A leading heart surgeon from Canada who was set to start at UCSF this month changed his mind, citing β€œthe evolving political climate” in the U.S.

Real consequences to Trump.

Dr. Marc Ruel, one of the world's top heart surgeons, was set to move from Ottawa to San Francisco this year.

He backed out because of the political situation here and the mistreatment of Canada by Trump through tariffs and annexation

www.kqed.org/news/1203279...

27.03.2025 02:04 β€” πŸ‘ 2087    πŸ” 823    πŸ’¬ 73    πŸ“Œ 61

I’m surprised to hear that these might be one continuous cell instead of two twin cells. I’ve seen instances where I transduced one with an AAV but not the other

21.03.2025 19:05 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

@ivlrose is following 19 prominent accounts