Jean-Philippe Gourdine's Avatar

Jean-Philippe Gourdine

@docteurjayp.bsky.social

Assistant Professor of Chemistry at Lewis & Clark College, Portland OR Interest Glycobiology, Bladder Microbiome, Reproducibility of Research & Ancient DNA www.jpgourdine@github.io

122 Followers  |  189 Following  |  4 Posts  |  Joined: 13.11.2024
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Posts by Jean-Philippe Gourdine (@docteurjayp.bsky.social)

Registration and abstract submissions will open in June! Bookmark the 2026 SFG Annual Meeting webpage and stay tuned for more information: https://lnkd.in/g75JFg-h

Registration and abstract submissions will open in June! Bookmark the 2026 SFG Annual Meeting webpage and stay tuned for more information: https://lnkd.in/g75JFg-h

SAVE THE DATE: The 53rd Society for Glycobiology Annual Meeting (SFG 2026) is heading to Atlanta! Join the global glycobiology community November 8–11, 2026 at the Emory Conference Center Hotel for four days of cutting‑edge science, collaboration, and discovery. lnkd.in/g75JFg-h
#SFG2026

27.02.2026 16:53 β€” πŸ‘ 11    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Thanks for visiting us and for giving us this great presentation!

25.02.2026 20:10 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Thank you @docteurjayp.bsky.social for hosting my recent visit to Lewis & Clark College! It was a great visit and I enjoyed learning more about your work.

25.02.2026 19:47 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
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πŸ”¬Trouble expressing glycoside hydrolases or glycosyltransferases? BioF:GREAT can help!

JP Gourdine’s lab (Lewis & Clark College) now expressesπŸ§ͺ GFP-tagged GH enzymes using our GH platformβ€”empowering undergrads & accelerating research🍭.

biofgreat.org

#BioFGREAT #NSF #Glycoscience #Glycobiology

23.02.2026 20:47 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Discovering Glycosylation-Dependent Protein Function by Thermal Proteome Profiling Protein glycosylation regulates essential cellular processes including protein folding, stability, and cell-cell interactions; however, how aberrant glycosylation impacts protein function and interact...

Congratulations former postdoc @jfhevler.bsky.social (in transit to Roche) and the team on their work using thermal proteome profiling along with glycosylation perturbagens to discover glycan-dependent protein functions at the proteome scale πŸ‘

www.biorxiv.org/content/10.6...

08.12.2025 02:32 β€” πŸ‘ 90    πŸ” 26    πŸ’¬ 1    πŸ“Œ 3

The lac operon in uropathogenic Escherichia coli enhances intracellular growth by enabling host glycan utilization https://www.biorxiv.org/content/10.64898/2025.12.03.691977v1

04.12.2025 03:16 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Very bad indeed.

04.12.2025 01:38 β€” πŸ‘ 49    πŸ” 21    πŸ’¬ 2    πŸ“Œ 2
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Uncharted territory - the Akkermansia muciniphila import system at University of Birmingham on FindAPhD.com PhD Project - Uncharted territory - the Akkermansia muciniphila import system at University of Birmingham, listed on FindAPhD.com

πŸ’ŽMRC AIM PhD advertπŸ’Ž Uncharted territory - the Akkermansia muciniphila import system.

Liang Wu, David Tourigny, and I are looking for someone to work on how A. muciniphila imports mucin.

www.findaphd.com/phds/project...

02.12.2025 19:08 β€” πŸ‘ 7    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0
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Amos Bairoch, Swiss pioneer of bioinformatics, passes away We are deeply saddened to announce the passing of our co-founder and Group Leader Amos Bairoch. Emeritus professor at the University of Geneva, he shaped the development of bioinformatics over more th...

We are deeply saddened to share the passing of Amos Bairoch, pioneer of bioinformatics and co-founder of SIB. His lifelong commitment for high-quality, open data transformed global research. We honour his legacy by continuing to build the future of bioinformatics.

02.12.2025 08:24 β€” πŸ‘ 35    πŸ” 16    πŸ’¬ 4    πŸ“Œ 8

RIP Amos! I was lucky to meet him in Geneva and thanked him for his contribution to bioinformatics for my own research.

03.12.2025 01:36 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
TC-TPA residues 311-562 in white, 50 conformers selected from the highest populated clusters from the analysis of the MD trajectory and not at random (new Re-Glyco Ensemble now on glycoshape.org) are shown in dark blue with wires, and the envelope in cyan is represented by QuickSurf to represent the approximate excluded volume (VMD used for rendering). You can select up to 500 frames in Advanced Settings

TC-TPA residues 311-562 in white, 50 conformers selected from the highest populated clusters from the analysis of the MD trajectory and not at random (new Re-Glyco Ensemble now on glycoshape.org) are shown in dark blue with wires, and the envelope in cyan is represented by QuickSurf to represent the approximate excluded volume (VMD used for rendering). You can select up to 500 frames in Advanced Settings

3/3 GlycoShape is an open access library of glycan structures from MD simulations that gives users all the diff structures significantly occupied at equilibrium and tools to reconstruct the target glycoproteins with a single representative conformer (Re-Glyco) or multiple (Re-Glyco Ensemble)

02.12.2025 18:28 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 1
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An ultrasensitive and modular platform to detect Siglec ligands and control immune cell function Siglec-liposomes are a multivalent and modular platform for profiling Siglec ligands and modulating immune cell function.

Excited to share our laboratory's research tools to study Siglecs along with some interesting discoveries with these tools. Lot of help from many group, but @zeinab-jc.bsky.social was the major driver of this work. Please reach out if you would like to try them out. www.science.org/doi/10.1126/...

12.11.2025 21:57 β€” πŸ‘ 41    πŸ” 13    πŸ’¬ 0    πŸ“Œ 4

Happy to connect with someone whose work inspired mine!

11.11.2025 02:07 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Tools for Structural Lectinomics: From Structures to Lectomes <div><p>Lectins are ubiquitous proteins that interact with glycans in a variety of molecular processes and as such, also play a role in diseases, whether infectious, chronic or cancer-related. The sys...

New publication from @anneimb.bsky.social and collaborators from @sib.swiss :

"Tools for Structural Lectinomics: From Structures to Lectomes"

Open access ➑️ hal.science/hal-04979945v1

Support from @glyco-alps.bsky.social @agencerecherche.bsky.social @labexarcane.bsky.social

@cnrs.fr

03.04.2025 08:15 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 0    πŸ“Œ 1
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Tenure-track Faculty position just opened up in my department! If you want to be part of a dynamic group who is excited about science, apply. For more details, visit www.usherbrooke.ca/emplois/offr...

Please share in your networks! #microsky

07.04.2025 12:42 β€” πŸ‘ 43    πŸ” 56    πŸ’¬ 0    πŸ“Œ 2

Ou preprint is out! #Urobiome #OveractiveBladder #Glycans #Glycotime

05.04.2025 07:22 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Lab Administration Research Technician- Bertozzi Lab Primary Work Address: Beckman Center, Stanford, CA, 94305-5323 Current HHMI Employees, click here to apply via your Workday account. We are currently looking for a highly motivated Lab Administration ...

We are seeking to hire a lab tech, this is an HHMI funded position, please share the job posting:

hhmi.wd1.myworkdayjobs.com/en-US/Extern...

27.03.2025 01:51 β€” πŸ‘ 88    πŸ” 78    πŸ’¬ 0    πŸ“Œ 3
Confirmed speaker list and details about the 2025 Carbohydrates GRC

Confirmed speaker list and details about the 2025 Carbohydrates GRC

Registration is open for the 2025 Gordon Research Conference on Carbohydrates and the associated Gordon Research Seminar! πŸ§ͺ We have a exciting line-up of confirmed speakers and more to be added!
www.grc.org/carbohydrate...
The conference will be held June 15 - 20 in Holderness, NH.

25.03.2025 17:07 β€” πŸ‘ 7    πŸ” 4    πŸ’¬ 0    πŸ“Œ 2
Sexiest glycoboi

Sexiest glycoboi

#glycotime @kathiralagesan.bsky.social

26.03.2025 00:03 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 2    πŸ“Œ 0
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🚨 Join us for the next GlyGen Webinar!

πŸ—“ April 01, 2025 | πŸ•’ 10 AM EST

πŸŽ™ Dr. @Zhiyong Lu, NIH

πŸ’‘ Biomedical Text Mining for Literature Retrieval & Curation

πŸ”— gwu-edu.zoom.us/j/91498498310

Missed previous webinars? Check our YouTube: @glygenmyglygen4223

#glycotime #webinar #NIH

19.03.2025 03:31 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Protein codes promote selective subcellular compartmentalization Cells have evolved mechanisms to distribute ~10 billion protein molecules to subcellular compartments where diverse proteins involved in shared functions must assemble. Here, we demonstrate that prote...

Cool paper using LLM to discover a protein sequence code for subcellular localization πŸ‘

www.science.org/doi/10.1126/...

09.02.2025 00:46 β€” πŸ‘ 236    πŸ” 68    πŸ’¬ 6    πŸ“Œ 3
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Carbohydrate-active enzymes from Akkermansia muciniphila break down mucin O-glycans to completion - Nature Microbiology Biochemical characterization of 66 carbohydrate-active enzymes from the gut microorganism Akkermansia muciniphila reveals that these enzymes can break down a range of host glycans, including mucin, wh...

New paper out today from the lab on Akkermansia muciniphila 🦠and how it breaks down host glycans! Very proud of my group, especially @cassiebakshani.bsky.social who did an amazing job. @naturemicrobiol.bsky.social

www.nature.com/articles/s41...

31.01.2025 10:25 β€” πŸ‘ 128    πŸ” 42    πŸ’¬ 3    πŸ“Œ 7
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Quinone extraction drives atmospheric carbon monoxide oxidation in bacteria - Nature Chemical Biology Here, Kropp et al. use cryo-electron microscopy and structural modeling to show that the enzyme [MoCu]-CO dehydrogenase interacts with its partner, the membrane-bound quinone-binding protein CoxG, to ...

In Nature Chemical Biology today, we reveal how microbes clean our atmospheres by consuming carbon monoxide (CO) gas. A methodological tour de force from Ashleigh Kropp, Rhys Grinter, and David Gillett with broad implications for the atmosphere and bioenergetics. www.nature.com/articles/s41...

29.01.2025 10:20 β€” πŸ‘ 72    πŸ” 33    πŸ’¬ 0    πŸ“Œ 2
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There are now 24 step-by-step guides, explaining how to create these ⬇️ data visualizations with R/ggplot2 - I hope this is a useful resource. Find them all here: joachimgoedhart.github.io/DataViz-prot...

16.12.2024 09:25 β€” πŸ‘ 551    πŸ” 193    πŸ’¬ 17    πŸ“Œ 14