a 3d rendering of the skull and cranial muscles of the Eurasian oystercatcher (Haematopus ostralegus)
turns out you can do some pretty cool stuff with the power of diceCT, SPROUT (www.biorxiv.org/content/10.1...), and the SmARTR pipeline (www.sciencedirect.com/science/arti...)
21.12.2024 15:28 β π 39 π 10 π¬ 0 π 0
Any publicly accessible scans can be used. Stained scans such as diceCT are needed for visualizing soft tissues. Segmentation of the tissues of interest is required before rendering (see steps 4-5 of our pipeline). We are happy to provide assistance or advice if needed during the process.
10.12.2024 10:37 β π 2 π 0 π¬ 1 π 0
Thanks π
10.12.2024 10:36 β π 1 π 0 π¬ 0 π 0
New snake renderings from CT scan data, created using our recently published SmARTR photorealistic pipeline! π Our manuscript is now in its final published form: doi.org/10.1016/j.is...
09.12.2024 11:02 β π 42 π 6 π¬ 2 π 1
Excited to regularly share squamate renderings created with our recently published SmARTR photorealistic pipelineβall derived from solely CT scan data! Check out the networks to create your own also here: github.com/MeVisLab/SmA...
02.12.2024 10:19 β π 26 π 5 π¬ 1 π 0
Do you use 3D imaging like CT or MRI for research, teaching, outreach, or art? Check out our new article featuring a detailed workflow for producing 3D cinematic renderingsβfrom tissue-level to whole-organism detailsβwith stunning realism! doi.org/10.1016/j.is... @helsinkiuni.bsky.social
23.11.2024 12:27 β π 87 π 23 π¬ 5 π 1
EMBO is the organization of more than 2,100 leading researchers that promotes excellence in life sciences in Europe and beyond.
https://www.embo.org/
Evolutionary developmental biologist β Max Planck Group Leader β Craniofacial development and evolution β brain and skull co-evolution and co-development β cell type evolution β hourglass pattern β vertebrates β genomics & transcriptomics & cell behavior
Postdoctoral researcher from π§π· jointly based at Stowers and the Hopkins Marine Station at Stanford | genomics, embryos, worms, regeneration | USP, Butantan and Oxford alumnus | my opinions
Postdoctoral researcher at @anshulkundaje.bsky.social⬠Machine learning #ML, gene regulatory networks #GRN, single cell and spatial #omics.
Developer of https://decoupler.readthedocs.io/
Postdoc @unibas Land-use change, nitrogen policies,
Developmental biologist. Postdoc at the Francis Crick Institute
scientist | pacifist | transposable elements | evo-devo
PhD @trono-lab.bsky.social
PhD student @houartlab.bsky.social King's College London.
PhD Candidate at Brown University EEOB
skeletal muscle functional morphology, biomechanics, collagen architecture, extraocular muscles
Roberts Lab | Knox College β22 | Optimist
#postdoc researcher in #craniofacial #development at @stowersinstitute.bsky.social
Northern Irish postdoc with Duer Lab, University of Cambridge. #Bone, #biomineralization, #ECMatrix biology, #electronmicroscopy, solid state #NMR. Views my own (he/him).
Postdoc at Baylor College of Medicine in the PochΓ© lab studying craniofacial development. Broadly interested in development and morphogenesis. ππͺ°π
JCChildsFund Postdoc Fellow interested in cell & tissue patterning during development | Former C. elegans wrangler @ Stanford Feldman Lab | UVA alum (opinions my own)
Peifer lab postdoc at #UNC looking for opportunities to start a lab in Europe. Morphogenesis, collective cell migration, cytoskeleton, cell-adhesion and self-organization/emergent behavior in #Drosophila. Animal photos: π· instagram.com/maikscritters πΈπ
Postdoc in the Laird Lab studying germ cell growth dynamics at UCSF. PhD with the Shvartsman and Gavis labs at Princeton. She/her. Uffda.
HSRU postdoctoral fellow. Development & Stem cell #ucsc βπ UNMSM π΅πͺ UNSAM π¦π·
Postdoc fellow in the Plath lab at UCLA | Alum Cambridge University & Babraham Institute | Researching epigenetic changes during human embryonic development
Postdoc at CCRB (King's College London), PhD at reNEW/DanStem (UCPH).
I was once a tiny embryo but now I'm fascinated by them.