Michael Seidl

Congratulations Vasilis 🎉

Widespread shifts in genome architecture and trophism across fungi. Phylogenetic positions of the shifts identified for genome size. Negative values denote an identified decrease in the genomic trait value while positive values denote an increase in the genomic trait value.

Fungal #GenomeSize variation is largely driven by TEs & lineage-specific genome defenses. @tbadet.bsky.social & @danielcroll.bsky.social show that presence/absence of RIP mutation systems influences #genome architecture, identifying a likely novel defense mechanism @plosbiology.org 🧪 plos.io/4hcC5tx

We are happy to share our latest work in @nature.com . We study the genomic and cellular basis of facultative symbiosis in Oculina patagonica - a Mediterranean coral remarkable for its ability to survive long periods without algal symbionts. Led by Shani Levy and @xgrau.bsky.social
rdcu.be/eLbaZ

Communities of plasmids as strategies for antimicrobial resistance gene survival in wastewater treatment plant effluent - npj Antimicrobials and Resistance npj Antimicrobials and Resistance - Communities of plasmids as strategies for antimicrobial resistance gene survival in wastewater treatment plant effluent

🧬 What if #plasmids weren’t competitors, but cooperators?
A new study in npj Antimicrobials & Resistance shows that many plasmids coexist within the same bacterium — and that non-resistant ones survive thanks to those carrying #AMR genes.
#AMR #Plasmids #OneHealth
🔗 doi.org/10.1038/s442...

🎉We have announced a new professorship at the University of Gothenburg 🇸🇪 to celebrate our Crown Princess’s 50th birthday!
🌿Broad focus on biodiversity — from microbes to modelling
📢A fantastic opportunity for researchers working across scales and disciplines!

🔗 web103.reachmee.com/ext/I005/103...

Including a position in my group to work on Evolutionary Genomics of Fungal pathogens

Open Positions ERC-funded project on the mechanism of horizontal transfer of entire fungal chromosomes PhD PostDoc

Want to understand how entire fungal chromosomes can be horizontally transferred?
Join us to unravel the mechanism/consequences of horizontal chromosome transfer in a fungal pathogen as part of an ERC-funded project. Postdoc/PhD positions available.
fungal-evolutionary-genetics.de/open-positio...

Professorship in plant genetics.
The Botanical Institute at Kiel University is advertising a W2 professorship. Great opportunity to do plant research in the north of Germany. See:
www.berufungen.uni-kiel.de/de/dateien/o...

Congrats, Joe Ecker @salkinstitute.bsky.social, to receiving the McClintock Prize! Joe has been a visionary leader of the field of genetics and genomics – not only for plants – for decades
www.salk.edu/news-release...

Very nice documentary about the origins of complex life with my PhD advisor Berend Snel @binfutrecht.bsky.social!

Yesterday the @biosb.bsky.social and Netherlands Integrative Microbial Ecology initiative organised a symposium on #MicrobialEcology. We hosted 80+ researchers, with 10 talks and 10 posters at @utrechtuniversity.bsky.social. A beautiful chance to hear more about exciting research across the country!

Now with official press release. I'm very much looking forward to welcome @cbarragan.bsky.social in January

www.uni-kiel.de/en/details/n...

Larissa Della Vedova (UU/WUR) on Optimization of a Mass Spectrometry and Computational Metabolomics Workflow to Unveil Microbial Dynamics in Recurrent Urinary Tract Infections

#metabolomics for #microbialecology

NWO-XL project by @lizscurious.bsky.social and colleagues
#NIME2025

Two full-time positions | Bioinformatician (m/f/d) + Applications Specialist (m/f/d) - Molecular Biology The Genome Facility at the Max Planck Institute for Evolutionary Biology in Plön is seeking to fill two positions (full time) to support and expand our core facility services.

Two new positions are available at the MPI for Evolutionary Biology to support development of our genomics facility. Both stand to become permanent. Both offer a ton of opportunity to engage in a wide range of creative science.

Pls repost 🙏

www.evolbio.mpg.de/3838377/job_...

W3-Professur für „Evolution und Biodiversität der Pflanzen“

W3-Professur: Evolution und Biodiversität der Pflanzen
@humboldtuni.bsky.social

Start: 1 Oktober 2026
Deadline: 24 Oktober 2025

haushalt-und-personal.hu-berlin.de/de/personal/...

Differential contributions of an antimicrobial effector from Verticillium dahliae to virulence and tomato microbiota assembly across natural soils https://www.biorxiv.org/content/10.1101/2025.09.30.679524v1

Purple pollen visible in a dissected flower of Linum grandiflorum, flowering flax, an insect-pollinated species.

*Postdoc in Evolutionary genomics at Stockholm University*
We are recruiting a postdoc for a large interdisciplinary project to investigate evolutionary drivers and genomic consequences of pollen evolution in response to pollination mode shifts in flowering plants. 1/5

su.varbi.com/what:job/job...

Our @TheSainsburyLab postdoc invited speaker is Megan McDonald @McdonaldMeganc — jumping genes and pathogenic schemes.

Prof. Megan will be joining @ETH_en in 2026!!!! 🎉 🥳 👏🏼 #planthealth #plantpath ethz.ch/en/news-and-...

Russell R. Geiger Professorship of Crop Science www.cam.ac.uk/jobs/russell... @cam.ac.uk @camplantsci.bsky.social

A timetree of Fungi dated with fossils and horizontal gene transfers - Nature Ecology & Evolution Combining fossil-based and molecular calibrations with data on horizontal gene transfer events, the authors develop a time-calibrated phylogeny of Fungi. This timescale, which integrates analytic uncertainties, suggests an older age of crown Fungi (1,401–896 million years ago), as well as a minimum age for ancient interactions involving fungi and the algal ancestors of embryophytes in terrestrial ecosystems (1,253–797 Ma).

A timetree of Fungi dated with fossils and horizontal gene transfers

www.nature.com/articles/s41...

Professor or Associate professor (Tenure Track/Full) in Microbial Genetics of Health - Turun yliopisto - Työpaikat - Duunitori Avoin työpaikka: Professor or Associate professor (Tenure Track/Full) in Microbial Genetics of Health - Turun yliopisto, Turku. Duunitorilla lisäksi yli 30 000 muuta avointa työpaikkaa. Lue lisää nyt!

Professor (full) or Associate Professor (tenure track) in Microbial Genetics of Health (U. Turku Finland). Competitive starting package included! Please share.

duunitori.fi/tyopaikat/ty...

Protein Domain Designer tool for the generation of publication-ready protein domain diagrams

New week, new tool: Find our Protein Domain Designer tool to generate publication-ready protein domain diagrams here: domaindesigner.farnunglab.com

Discovery of functional NLRs using expression level, high-throughput transformation and large-scale phenotyping Nature Plants - Rapid discovery of functional resistance genes is enabled by a high-expression signature and high-throughput transformation. This approach identified 31 new resistance genes for...

Super excited to see our work on the NLRseek program finally published 🥳 Here we identify new NLRs against major wheat pathogens and present a pipeline for NLR identification. Huge thank you to all of the co-authors for bringing this work together! @matthewmoscou.bsky.social rdcu.be/eIGvv

Become my colleague @oxfordbiochemistry.bsky.social !
2 Associate Professorships in the areas of
- prokaryotic/eukaryotic microbiology
- metabolism

my.corehr.com/pls/uoxrecru...

Structure and sequence evolution in the pennycress (Thlaspi arvense) pangenome Summary · Eukaryotic genomes harbor many forms of variation, including nucleotide diversity and structural polymorphisms, which experience natural selection and contribute to genome evolution and biod...

New — with @joannarifkin.bsky.social, @jotlovell.bsky.social, @spicybotrytis.bsky.social, and many more — we created seven new high-quality genomes and explored pangenomic variation in the emerging oilseed crop pennycress (Thlaspi arvense). 1/

Comparative Transcriptomic Analysis of Zymoseptoria tritici Reveals Interaction-Specific Gene Expression Patterns During Susceptible, Resistant, and Non-Host Interactions | Molecular Plant-Microbe Int... Zymoseptoria tritici causes Septoria tritici blotch which significantly reduces yields of wheat. To investigate infection phase-specific gene expression in the pathogen, we analyzed gene expression du...

We are very happy to share that our paper on Comparative Transcriptomics of Zymoseptoria tritici during host and non-host interactions was accepted for publication in @mpmijournal.bsky.social journal and was just released in the first look section! doi.org/10.1094/MPMI...

Job Alert! We're hiring a BIOINFORMATICIAN / NGS SPECIALIST to support our new Molecular Biodiversity Lab in the @terra-cluster.org at @unituebingen.bsky.social. Like the idea to use your skills for understanding biodiversity? To work on diverse questions in a wonderful place? Apply!
Please repost!

The First of Us: Ophiocordyceps use a novel scramblase-binding peptide to manipulate zombie ants Parasite-adaptive manipulation of behavior is a widespread natural phenomenon. While Ophiocordyceps zombie fungi are well-known for hijacking ant behavior to increase their fitness, functionally chara...

Which fungal 🍄 molecules cause zombie 🧟‍♀️ ant 🐜 behaviors? @williamycete.bsky.social has begun to answer this question! He found a peptide that binds to scramblase and affects important odor-dependent behaviors in ants. Spoiler: worms 🪱 played a key role in this research 🧐 doi.org/10.1101/2025...

Congratulations #RobertKoetsier et al.!

Using cross-species co-expression to predict metabolic interactions in microbiomes In microbial ecosystems, metabolic interactions are key determinants of species’ relative abundance and activity. Given the immense number of possible interactions in microbial communities, their expe...

New preprint out by #RobertKoetsier, the first of his PhD project, on assessing the use of cross-species coexpression analysis to identify primary and secondary metabolic interactions in microbiomes: www.biorxiv.org/content/10.1...