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Rob Waterhouse

@rmwaterhouse.bsky.social

Director, Environmental Bioinformatics Group at SIB Swiss Institute of Bioinformatics @sib.swiss. Chair, European Reference Genome Atlas (ERGA, @ergabiodiv.bsky.social). #biodiversity #genomics www.rmwaterhouse.org

1,821 Followers  |  1,717 Following  |  1,639 Posts  |  Joined: 12.11.2024  |  1.7393

Latest posts by rmwaterhouse.bsky.social on Bluesky

DAY 2 - Genomics for Biodiversity Conference
YouTube video by ERGA Coordination DAY 2 - Genomics for Biodiversity Conference

Day 2 of our #Genomics for #Biodiversity conference is opened by Pier Luigi Buttigieg www.youtube.com/watch?v=FR7I... an inspirational insight into the global biodiversity data ecosystem ... followed by the amazing plethora of @biogeneurope.bsky.social @ergabiodiv.bsky.social Case Studies

30.10.2025 19:19 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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It's finally time! The #Genomics for Biodiversity Conference goes LIVE today at 15:00 CET with an incredible line up of talks!
▢️Join the livestream: www.youtube.com/playlist?lis...
🌍More info: www.erga-biodiversity.eu/post/genomic... @biogeneurope.bsky.social @ebpgenome.bsky.social #genomes

29.10.2025 11:48 β€” πŸ‘ 10    πŸ” 6    πŸ’¬ 0    πŸ“Œ 2

➑️ First Keynote Talk happening now: Christina Hvilsom - #Genomes in action for conservation
www.youtube.com/live/rP0Xe-h...
#conservation #genomics @biogeneurope.bsky.social

29.10.2025 14:36 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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DAY 1 - Genomics for Biodiversity Conference - from genomes to impact YouTube video by ERGA - European Reference Genome Atlas

πŸ””We are back for the 2nd session of case study presentations!
www.youtube.com/live/rP0Xe-h...
#Genomics for #Biodiversity Conference

29.10.2025 16:34 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
DAY 2 - Genomics for Biodiversity Conference - from genomes to impact
YouTube video by ERGA - European Reference Genome Atlas DAY 2 - Genomics for Biodiversity Conference - from genomes to impact

It's almost time for day 2️⃣ of the Genomics for Biodiversity Conference. Today we start at 10:00 CET.
➑️ www.youtube.com/watch?v=Iq17...
Check out the programme: www.erga-biodiversity.eu/post/genomic...

#genomes for #biodiversity @biogeneurope.bsky.social

30.10.2025 08:40 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
DAY 2 - Genomics for Biodiversity Conference
YouTube video by ERGA Coordination DAY 2 - Genomics for Biodiversity Conference

🌍 We are back for the 2nd case study session of the day! Genomics for #Biodiversity conference - from genomes to impact. A really biodiverse set of @biogeneurope.bsky.social case studies are presenting today πŸ”½
www.youtube.com/watch?v=FR7I...

www.erga-biodiversity.eu/post/genomic... #conference

30.10.2025 11:51 β€” πŸ‘ 3    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1
DAY 2 - Genomics for Biodiversity Conference
YouTube video by ERGA Coordination DAY 2 - Genomics for Biodiversity Conference

We are live with DAY 2️⃣ - Genomics for Biodiversity Conference
Join us: www.youtube.com/watch?v=FR7I...

30.10.2025 09:25 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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GALAXY-CH Transdisciplinary Workflows Workshop Registration Galaxy is a web-based and open-source platform (see e.g. https://usegalaxy.eu/). It shall enable researchers to access and use computational tools and high-performance compute infrastructures easily. ...

Join our interdisciplinary online workshop on the Galaxy platform! Nov 6, 2025 | 13:30–16:05 (CET)
Learn how to build reproducible data analysis workflows using Galaxy, a powerful, user-friendly platform. The session is intended for the Swiss rsrch community.
Register forms.gle/Y3vxW1u62FLM...

29.10.2025 16:19 β€” πŸ‘ 2    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
DAY 1 - Genomics for Biodiversity Conference - from genomes to impact
YouTube video by ERGA - European Reference Genome Atlas DAY 1 - Genomics for Biodiversity Conference - from genomes to impact

Today we kicked-off our #Genomics for #Biodiversity conference in Porto, Portugal www.youtube.com/watch?v=rP0X... with two keynotes and our first tranche of @biogeneurope.bsky.social @ergabiodiv.bsky.social Case Studies in reference #genome applications for conservation or bioeconomy

29.10.2025 18:52 β€” πŸ‘ 18    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Genomics for Biodiversity Conference - from genomes to impact 29–31 October 2025SummaryπŸ—“οΈ Dates:Β  29 - 31 October 2025 (click to add to your agenda!)πŸ”— Online venue: ERGA YouTube ChannelConference programmeWe are excited to announce the Genomics for Biodiversity ...

Starting tomorrow, broadcast online: #Genomics for #Biodiversity Conference - from #genomes to impact ... join us! www.erga-biodiversity.eu/post/genomic...

28.10.2025 15:11 β€” πŸ‘ 3    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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Vendredi 24 octobre 12:45 - L’aventure des sciences - Atlasea, Γ  la poursuite des gΓ©nomes marins | Ushuaia TV L’aventure des sciences

#ReportageπŸ“Ί | DΓ©couvrez le reportage "ATLASea, Γ  la poursuite des gΓ©nomes marins" et partez Γ  la rencontre d'Emilie Martin, photographe scientifique, travaillant pour le programme @atlasea.bsky.social 🐟

⏰ Vendredi 24 octobre à 12h45
πŸ“Ί UshuaΓ―a TV

23.10.2025 13:30 β€” πŸ‘ 5    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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Celebrating 100+ BGE genomes! - Biodiversity Genomics Europe By Luisa Schlude Marins In October 2025, Biodiversity Genomics Europe (BGE) reached a milestone: over one hundred genomes have been sequenced and publicly released as part of the project. More than si...

In October 2025, Biodiversity Genomics Europe (BGE) reached a milestone: over one hundred genomes have been sequenced and publicly released as part of the project. biodiversitygenomics.eu/2025/10/27/c... @biogeneurope.bsky.social @ergabiodiv.bsky.social @ebpgenome.bsky.social

27.10.2025 17:33 β€” πŸ‘ 17    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
Session CON4

Attending World Biodiversity Forum in Davos next year and involved in literature management? Then consider submitting an abstract to our session "Biodiversity Evidence: A roadmap for liberating biodiversity knowledge from literature" deadline meetingorganizer.copernicus.org/WBF2026/sess...

27.10.2025 17:20 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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πŸŽ™οΈ We're excited to welcome Dr. Christina Hvilsom as a keynote speaker at the Genomics for Biodiversity Conference!
Don’t miss her talk β€œGenomes in Action for Conservation” 🌍
πŸ’» Online & free | 29–31 Oct
πŸ”— www.erga-biodiversity.eu/post/genomic... @biogeneurope.bsky.social @ebpgenome.bsky.social

22.10.2025 10:30 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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The Genomics for Biodiversity Conference will feature 4 exciting keynote talks exploring the connections between #biodiversity genomics, policy, and society.
Don’t miss the opportunity to join us next week! erga-biodiversity.eu/post/genomic...
πŸ—“οΈ 29–31 October, fully online
@biogeneurope.bsky.social

24.10.2025 09:46 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Madeiran Insect Bioblitz: Genomes in the laurel – insects across an Atlantic island. About the hotspotΒ Set in the Atlantic Ocean, Madeira’s steep valleys, high heath, and pockets of ancient laurel forest shelter a remarkable variety of insects, many found nowhere else in the world. Se...

Last summer, the Madeiran Insect Bioblitz Project #MIB brought together citizens & scientists to explore the Madeira's incredible diversity of insects & generate reference #genomes 🐝🐜πŸͺ²

Learn more about this project supported by @biogeneurope.bsky.social www.erga-biodiversity.eu/post/madeira...

24.10.2025 11:43 β€” πŸ‘ 4    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
a yellow gorgonian from Marseille. Picture by FrΓ©dΓ©ric Zuberer

a yellow gorgonian from Marseille. Picture by FrΓ©dΓ©ric Zuberer

The genome of the yellow gorgonian Eunicella cavolini has been sequenced thanks to @ergabiodiv.bsky.social @biogeneurope.bsky.social This reference genome will be very useful to work on speciation and adaptation in Mediterranean Eunicella.

open-research-europe.ec.europa.eu/articles/5-323

27.10.2025 08:39 β€” πŸ‘ 6    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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This October @biogeneurope.bsky.social reached a #milestone: over one hundred #genomes have been sequenced and publicly released as part of the project.πŸ₯³
Want to know more? πŸ‘‰ biodiversitygenomics.eu/2025/10/27/c...
@iboleurope.bsky.social @ergabiodiv.bsky.social @horizoneu.bsky.social

27.10.2025 13:10 β€” πŸ‘ 8    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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🧬 The #BGE continent-wide network behind the sequencing and assembly of these genomes includes @genoscopeumr.bsky.social opeumr.bsky.social, @cnag-eu.bsky.social u.bsky.social, @sangerinstitute.bsky.social, @scilifelab.se b.se, Università degli Studi di Firenze, and Università degli Studi di Bari.

27.10.2025 14:56 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0
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Celebrating 100+ BGE genomes! In October 2025, Biodiversity Genomics Europe (BGE) reached a milestone: over one hundred genomes have been sequenced and publicly released as part of the project. More than simply collecting samples ...

πŸŽ‰ This month we celebrate an important milestone for @biogeneurope.bsky.social: more than 100 genomes have been sequenced as part of the project!!
πŸ‘ Congratulations & thanks to all project partners for their dedicated work!

www.erga-biodiversity.eu/post/celebra... @ebpgenome.bsky.social

27.10.2025 14:56 β€” πŸ‘ 15    πŸ” 4    πŸ’¬ 1    πŸ“Œ 1
Client Challenge

Your favourite single-cell gene signature scoring method now in Python #scverse and much faster!
pypi.org/project/pyuc...

27.10.2025 13:56 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

For European species we offer a template for Genome Reports for publishing machine-readable manuscripts with no hype no fuss riojournal.com/topical_coll...

25.10.2025 22:45 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

LLMs still underperform on understanding evolution

Specifically, evolution when represented as a Newick tree file. Rerooting, tree perturbations, etc, still remain challenging for these algorithms

25.10.2025 21:18 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
Picture of MEME students on the beach

Picture of MEME students on the beach

Do you want to do a Masters in Evolutionary Biology? The call for applying to the MEME program is now open! MEME is a fantastic 2-year MSc between four European Universities on all areas of Evolutionary Biology. Apply and study in Sweden/France/the Netherlands/Germany/USA/Switzerland! www.evobio.eu

24.10.2025 09:04 β€” πŸ‘ 59    πŸ” 65    πŸ’¬ 0    πŸ“Œ 2
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Learning about iChatBio at #LivingData2025

24.10.2025 19:12 β€” πŸ‘ 7    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
24.10.2025 17:38 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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At #LivingData2025, our editor @cabbageleek.bsky.social presented @onestop-project.eu as a tool for scaling #invasivespecies checklist workflows

24.10.2025 16:42 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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#genomic DSI session at #LivingData2025 with @ergabiodiv.bsky.social and @biogeneurope.bsky.social what is DSI and what are non-monetary benefits

24.10.2025 16:48 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 1
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Moments from #LivingData2025, held this week in BogotΓ‘, Colombia! Presentations, knowledge exchange, task groups, strategies, and new insights for the ongoing discussion about research projects and their sustainability plans. Well done!, everyone! @tdwg.org @gbif.org @obis.org @geobon.org

24.10.2025 15:39 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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Day 3 highlights from #LivingData2025 🌿
We started the day by attending the second part of the β€œLong Live Biodiversity Data: Knowledge Transfer and Continuity Across Research Projects” symposium.

@pensoft.net | @lifewatcheric.bsky.social | @naturalis.bsky.social

24.10.2025 07:03 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

@rmwaterhouse is following 20 prominent accounts