Javier is the co-coordinaror of PR2... Warn congratulations.
29.06.2025 06:57 β π 10 π 1 π¬ 1 π 0
A paper using the PR2 and metaPR2 database.
28.06.2025 14:44 β π 1 π 0 π¬ 0 π 0
Nice paper making use of PR2
07.05.2025 10:16 β π 5 π 0 π¬ 0 π 0
@daniel-vaulot.bsky.social presenting the @pr2-database.bsky.social at our DNA metabarcoding course at @biovitenskap.bsky.social A very good new addition to our biannual course π
10.04.2025 09:01 β π 10 π 2 π¬ 0 π 1
Grateful I got the opportunity to contribute to this amazing resource #ProtistsOnSky
03.04.2025 13:26 β π 14 π 2 π¬ 0 π 0
I am very happy that ROD (The Ribosomal Operon Database) is now included in the outstanding PR2 web interface, enhancing its accessibility and utility. I hope to make some updates to ROD in the near future. with @drhyfe.bsky.social
03.04.2025 21:33 β π 11 π 3 π¬ 1 π 1
Some functional traits have been added:
- HAB (Harmful Algal Bloom) species
- ecological function - from Sommeria-Klein et al. 2021
03.04.2025 10:53 β π 0 π 0 π¬ 1 π 0
A few taxonomic groups have been updated from work performed during the 2023 Barcelona EukRef workshop and from individual contributions including:
- Picozoa
- Choropicophyceae
- Rhodophyta
- Dinophyceae
- Foraminifera
03.04.2025 10:53 β π 0 π 0 π¬ 1 π 0
- The web interface now provides access to the ROD database that contains full-length eukaryotic ribosomal operons developed by @krabberod.bsky.social
03.04.2025 10:53 β π 1 π 1 π¬ 1 π 1
Announcing the new release of the PR2 database, version 5.1.
pr2-database.org/post/news/20...
Very big thanks to all the contributors: @fonamental.bsky.social @ambonacolta.bsky.social @krabberod.bsky.social and more...
A few highlights:
03.04.2025 10:53 β π 25 π 19 π¬ 1 π 2
We are back on-line. It took less time than anticipated to upgrade R....
02.04.2025 13:55 β π 1 π 0 π¬ 1 π 0
The PR2, metaPR2 and PR2-primers websites will be off in the coming days as we are switching from R 3.6 to R 4.4.
02.04.2025 10:59 β π 3 π 3 π¬ 1 π 1
Protists are not just sequences, they have incredible shapes...
28.03.2025 17:40 β π 3 π 0 π¬ 0 π 0
New paper using PR2.
26.03.2025 11:14 β π 3 π 0 π¬ 0 π 0
Looks like a very good tool to use with the PR2 database.
20.03.2025 08:02 β π 2 π 0 π¬ 0 π 0
A tool to use with the metaPR2 datasets ?
14.03.2025 10:57 β π 2 π 2 π¬ 1 π 0
All PR2 shiny servers are back up and running...
01.03.2025 14:08 β π 5 π 3 π¬ 0 π 0
From the Richter lab in Barcelona... new species are always exciting...
27.02.2025 12:20 β π 10 π 4 π¬ 0 π 0
Open position Junior Professor Chair (CPJ)
Open position Junior Professor Chair (CPJ) 2025. CNRS EE-BIO
Join a world renowned marine lab in France.
New Junior Professor Chair (CPJ) opened in the Biological Station in Roscoff. The position is focused on the ecological, evolutionary, and functional roles of marine fungi, crucial to understanding our oceans.
www.sb-roscoff.fr/fr/2025/02/2...
28.02.2025 09:12 β π 68 π 41 π¬ 3 π 3
Very interesting paper #usingPR2
07.02.2025 09:27 β π 0 π 0 π¬ 0 π 0
ForBio and UiO/IBV course: Bioinformatics for environmental DNA sequencing
- ForBio
Read this story on the University of Oslo's website.
Registration is now open for the ForBio/UiO course βBioinformatics for environmental DNA sequencingβ
@biovitenskap.bsky.social @drhyfe.bsky.social @krabberod.bsky.social @ramalok.bsky.social
www.forbio.uio.no/events/cours...
23.01.2025 11:02 β π 15 π 15 π¬ 0 π 0
This very interesting Nature paper uses the metaPR2 database to assess the distribution of DPH containing diatoms.
20.12.2024 11:44 β π 1 π 0 π¬ 0 π 0
A new #StarterPack with scientist specialized in microbial bioinformatics - #MicroBioInf.
Please comment if you would like to be added: go.bsky.app/5h7VaGm
Looking forward to the discussions!
15.12.2024 09:22 β π 39 π 21 π¬ 22 π 0
You can add us, this will be nice...
14.12.2024 12:14 β π 0 π 0 π¬ 1 π 0
New preprint led by Ruben Gonzalez-Miguens for a new coi database that should be useful to annotate metabarcoding datasets with protists.
www.biorxiv.org/content/10.1...
10.12.2024 16:14 β π 14 π 9 π¬ 0 π 0
The Earth BioGenome Project (EBP), a moonshot for biology, aims to sequence, catalog, and characterize the genomes of all of Earth's eukaryotic biodiversity over a period of ten years.
π²Keep up with all EBP updates: https://linktr.ee/earthbiogenomeproject
Scientist @icmcsic.bsky.social #Barcelona: aquatic microbes, ecosystems, genomics, evolution, AI, bioinformatics & SciFi πͺπΈπ¦π· https://log-lab.barcelona
I'm a postdoc studying Marine Microbial Ecology ππ¦ πππ§¬
PS: I'm using this only for research π₯Ό
Evolutionary biologist interested in protist diversity and evolution. Postdoc at Swedish University of Agricultural Sciences.
Microbial Ecology and Evolution Lab at IBE Barcelona led by @fonamental.bsky.social. Studying marine animal holobiontsπ¦ πͺΈπ
The Station Biologique de Roscoff (SBR) is a centre for research and higher education in marine biology and ecology. It is jointly run by the National Centre for Scientific Research (CNRS) and the Sorbonne University (Paris).
Mr. Tintinnid | Doing research on marine planktonic protists - Tintinnid ciliates
Taxonomy, Phylogenetics, π¬Light- and electron microscopy, -Omics
Postdoctoral researcher in the Agatha lab at Paris Lodron University Salzburg (Austria)
Bioinformatician at the University of Oslo. Evolutionary biology, protists, progrock bassist.
Institutt for biovitenskap ved Universitetet i Oslo gir forskningsbasert undervisning og forskerutdanning av hΓΈy kvalitet innen et bredt spekter av biologien.
Follow us for research-based knowledge on studies & research across a wide spectrum of biology.
Postdoctoral fellow in the Keeling Lab @ UBC studying marine protistan symbionts. Previously: del Campo Lab & Coral Reef Futures Lab π πͺΈπ𧬠He/Him π³οΈβπ
Microbiologist studying the ecology and evolution of marine ciliates/
Associate Professor @HofstraU
Latina, Carioca, 1st Gen college student, plankton ecologist, fascinated with Protists, Lead-PI of GeekLab, Assoc. Prof University of Oslo
@biovitenskap.bsky.social & apprentice of ritmista at Oslo Sambaskole!
@samba_geek
https://the-geek-lab.netlify.app/
Senior Scientist @ Station biologique de Roscoff, France #cnrs #sorbonneuniversity
#eDNA #radiolaria #microbiomes #symbiosis #protists
Understanding eukaryotic molecular diversity and evolution. Marie SkΕodowska-Curie Postdoctoral Fellow @IBE_Barcelona @beaplab.bsky.social
https://miguelmsandin.github.io/
https://thelifeofretaria.github.io/
Mastodon: @SandinMM@ecoevo.social
Cilia and cell motility enthusiast, basal cognition, weird organisms esp protists and larvae, how do living systems compute?
Professor of Cellular & Biophysical Dynamics, Living Systems Institute, Exeter (past: DAMTP, Cambridge)
www.micromotility.com
I like to think about how cells work, especially among #protists. Driven by curiosity and a love to share detailed research and odd observations. Senior Research Scientist, Bigelow Laboratory for Ocean Sciences. He/him. https://www.protistsystems.org/
Oceanography, Family, Old Books, Living Well, Time Travel
