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Theoretical Biophysics

@theobiophysics.bsky.social

Theoretical Biophysics, Quantitative Biology https://sites.google.com/view/theoreticalbiophysics/theoretical-biophysics Our podcast https://creators.spotify.com/pod/show/theobiophysics An online seminar series https://sites.google.com/view/popdyn/home

1,309 Followers  |  306 Following  |  58 Posts  |  Joined: 12.12.2023
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Posts by Theoretical Biophysics (@theobiophysics.bsky.social)

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Unveiling hidden variables in stressed bacteria Noise in bacterial stress responses is often dismissed as mere randomness. While true stochasticity exists, much variation reflects hidden variablesβ€”cell state, history, and microenvironmentβ€”that are ...

Unveiling hidden variables in stressed bacteria: Cell Reports www.cell.com/cell-reports...

11.02.2026 07:43 β€” πŸ‘ 11    πŸ” 8    πŸ’¬ 3    πŸ“Œ 0

Ninth YBM starting soon!

02.03.2026 15:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Today's session of YBM starts in 1 hour. Join via this link: nyu.zoom.us/j/9481289609...

02.03.2026 15:02 β€” πŸ‘ 3    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1

This was a fun generalized modelling project with @janamassing.bsky.social @akfbio.bsky.social and @jdyeakel.bsky.social. Bacteria really need generalized models to make the maths fit properly.

02.03.2026 11:32 β€” πŸ‘ 4    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

This paper has now been published in PRX Life! journals.aps.org/prxlife/abst...

In this work I developed a scaling theory for spiking neural populations using a renormalization group approach -- the 1st, to my knowledge, applied to models of spiking neurons. See the thread for a brief summary.

10.10.2025 19:30 β€” πŸ‘ 12    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Sign up here for 3 exciting talks tomorrow: t.co/O7XhxxSn2u

01.03.2026 16:43 β€” πŸ‘ 0    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Steinwachs, J., Metzner, C., Skodzek, K. et al. Three-dimensional force microscopy of cells in biopolymer networks. Nat Methods 13, 171–176 (2016). #EpithelialMechanics
buff.ly/bKjQoDo

27.02.2026 08:01 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Next YBM session on Monday!
Sign up here for updates: t.co/O7XhxxSn2u

27.02.2026 01:37 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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The ninth session of YBM is coming up next week. Join us for two exciting talks on Monday (2nd March 2026) at 11am (EST). Mark your calendarsπŸ—“οΈ: tinyurl.com/29b7yk47 Zoom Meeting link: sites.google.com/view/theoret...

27.02.2026 01:35 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 0    πŸ“Œ 5

Submission deadline coming up! Submit your abstracts for the next YBM!

17.02.2026 18:15 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Deadline for next YBM meeting coming up!

05.02.2026 09:54 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Submission open for the ninth YBM Meeting (deadline - 19th February)! Abstract submission link: forms.gle/SBeQeAp9MR2U...

05.02.2026 09:53 β€” πŸ‘ 4    πŸ” 4    πŸ’¬ 0    πŸ“Œ 3

Today's session of YBM starts in 1 hour. Join via this link: nyu.zoom.us/j/9481289609...

02.02.2026 15:02 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 1

Do join!

28.01.2026 06:13 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Next session tomorrow!
Sign up here for updates: t.co/O7XhxxSn2u

01.02.2026 22:03 β€” πŸ‘ 5    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Next session tomorrow!
Zoom Meeting link and other information can be found here: sites.google.com/view/theoret...

01.02.2026 22:02 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 1
Preview
Research Group Leader Do you want to lead groundbreaking research in computational biology? Join us at EMBL-EBI! EMBL's European Bioinformatics Institute (EMBL-EBI) is seeking talented and highly-motivated scientists to jo...

We are hiring for group leaders again β€” EBI is a great place to start your research group!

embl.wd103.myworkdayjobs.com/EMBL/job/Hin...

30.01.2026 09:02 β€” πŸ‘ 66    πŸ” 89    πŸ’¬ 0    πŸ“Œ 2

Sign up here: forms.gle/MF2Q2jpeeqxy...
Speaker list of previous sessions and other information can be found on YBM website: sites.google.com/view/theoret...

28.01.2026 01:31 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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The eighth session of YBM is coming up next week. Join us for two exciting talks on Monday (2nd February 2026) at 11am (EST). Mark your calendarsπŸ—“οΈ: tinyurl.com/29b7yk47 Zoom Meeting link: sites.google.com/view/theoret...

28.01.2026 01:28 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 1    πŸ“Œ 4

Three fantastic speakers lined up: Wenhui Tang, Aniruddha N (anirudd98.bsky.social), Vaibhav Anand (vaianand.bsky.social).

28.01.2026 01:28 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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TULIP Summer School 2026
Applications are OPEN βœ…

β€œBiological interactions from genes to ecosystems”
will take place from June 27 to July 3, in France πŸ”οΈ

Open to PhD, Masters students & Postdoc researchers in ecology, evolution and functional biology

www.labex-tulip.fr/eng/news/tul...

15.01.2026 12:21 β€” πŸ‘ 9    πŸ” 11    πŸ’¬ 0    πŸ“Œ 0

Exciting postdoc opportunity in theoretical biology, working on sex differences in immunity as part of a new interdisciplinary consortium. Deadline is at the end of February, so there's still time to apply! #academicjobs #postdoc #theoreticalbiology #immunity #sexdifferences #lifehistorytheory

14.01.2026 09:02 β€” πŸ‘ 5    πŸ” 5    πŸ’¬ 0    πŸ“Œ 1
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We have the list of amazing speakers for the Population Dynamics virtual seminars 2026!

Soon the calendar with the dates!

sites.google.com/view/popdyn/...

22.01.2026 21:56 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Students & postdocs πŸ‘‰ Apply by April 16 for our hands-on #TheoreticalBiophysics workshop featuring participant talks, tutorials & lively discussions.

βœ… No registration fee
🍽️ Meals & hotel covered
✈️ Travel support available

Apply ➑️ janelia.news/THB26

@allysonsgro.bsky.social @zamakany.bsky.social

22.01.2026 14:37 β€” πŸ‘ 8    πŸ” 7    πŸ’¬ 0    πŸ“Œ 2
MVIF conversations

MVIF conversations

We have a surprise for you!

SAVE THE DATE January 26
for the FIRST episode of #MVIF conversations - Podcast

20.01.2026 13:59 β€” πŸ‘ 5    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0

TODAY

20.01.2026 09:03 β€” πŸ‘ 0    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Deadline approaching!

09.01.2026 15:17 β€” πŸ‘ 4    πŸ” 4    πŸ’¬ 0    πŸ“Œ 1

Deadline on 21 Jan (Wednesday)!
Submit your abstracts here: t.co/G3oPI5tr9d

18.01.2026 22:11 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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In this paper, we combined theory and experiments to study how stress can induce cooperation, and how this cooperation can promote tolerance under resource limitation.

* * Stress doesn’t always break systems β€” sometimes it reorganizes them.

14.01.2026 20:24 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 1    πŸ“Œ 1
Reducibility of higher-order networks from dynamics - Nature Communications The topology of interactions is shaping dynamics of complex systems. Here, the authors develop a quantitative method to determine how much higher-order structure can be reduced without affecting dynam...

Kudos to @maximelca.bsky.social @lgajo.bsky.social Arsham Ghavasieh & Federico Battiston for this international/cross-labs collaboration.

#NetworkScience #ComplexSystems

Paper πŸ‘‰ www.nature.com/articles/s41...

15.01.2026 13:36 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0