Applications are open for the @crg_eu PhD Programme! 20 fully funded positions — including one in our group through the Evolutionary Medical Genomics ITN.
Join us to develop deep generative models of cross-species data to tackle open questions in disease genetics.
www.crg.eu/en/content/t...
23.10.2025 11:00 — 👍 11 🔁 9 💬 0 📌 2
Check out our new preprint!
How can we get more out of existing protein/genome language models without retraining them?
26.05.2025 20:31 — 👍 7 🔁 2 💬 0 📌 0
Awesome paper. Simple post-hoc trick (averaging over homologs) with elegant evolution theory dramatically improves zero shot coding variant effect prediction in pLMs & actually delivers better results from the larger models (inverting the trend with raw likelihoods). 1/
26.05.2025 09:40 — 👍 48 🔁 9 💬 1 📌 1
@cwjpugh.bsky.social at #VariantEffect25
22.05.2025 10:29 — 👍 19 🔁 8 💬 0 📌 0
Proud supervisor moment! Next up at #VariantEffect25: Charles Pugh @cwjpugh.bsky.social, PhD student in Mafalda’s and my group, presents: From Likelihood to Fitness: Improving Variant Effect Prediction in Protein and Genome Language Models #AI #ProteinML
22.05.2025 10:10 — 👍 18 🔁 3 💬 0 📌 0
A lovely summary of what we have learnt about scaling from ProteinGym -- Have we reached a performance plateau? More on this later in the week from @cwjpugh.bsky.social
21.05.2025 08:55 — 👍 4 🔁 2 💬 0 📌 0
The Earth BioGenome Project (EBP), a moonshot for biology, aims to sequence, catalog, and characterize the genomes of all of Earth's eukaryotic biodiversity over a period of ten years.
🌲Keep up with all EBP updates: https://linktr.ee/earthbiogenomeproject
Assistant Professor in the Department of BioSciences at Rice University
Evolutionary and population genomics, conservation, reproductive biology, canids
https://sites.google.com/view/laurenhennelly
CS PhD Candidate at Stanford. Working at the intersection of Machine Learning, Regulatory Genomics, and Complex Disorders
PhDing at the Sanger Institute, i'm evolving every day
🌼 isabellezane.bio
International research centre devoted to curing #cancer and other diseases linked to #aging. @cerca.cat center, member of @bist.eu.
www.irbbarcelona.org
Conservation genetics & population genomics of tropical island populations, occasionally ancient DNA, phylogenetics, biogeography, & biodiversity informatics, mostly mammals 🐗🐂. She/her. 🇲🇨. X/Twitter previously sagitaninta.
Evolutionary biology PhD sudent at JGU Mainz
MEME graduate (LMU and Uppsala university double degree)
University of Tehran Graduate
We are the largest biomedical science hub in the south of Europe, by the beach in Barcelona.
Recerca biomèdica amb vistes |
@researchmar.bsky.social @crg.eu @melisupf.bsky.social @embl.org @isglobal.org @ibe-barcelona.bsky.social @fpmaragall.bsky.social
Bioinformatics Research Associate at @carnegiescience.bsky.social | Bioinformatics | Genomics Data Science | Single-Cell & Spatial transcriptomics | Carpentries Certified Instructor
PhD Candidate @CRG.eu with @larsplus.bsky.social | Computational Biology & Single Cell Epigenetics
Biólogo y geógrafo cultural. Me gusta pensar que hago una ecología más integral.
Ph.D. Earth and Environmental Sciences, @thegraduatecenter.bsky.social
Neófito de la fotografía. Todas las fotografías son de mi autoría con excepción de las republicadas.
Studying Cognitive Science and Biomathematics at Rutgers University, New Brunswick
Our mission is to enable the promise of genomics to better human health by creating the world’s most advanced sequencing technologies.
PhD Ecology & Evolution | Metacommunities & networks enthusiast | postdoc in the PredCom research group at Univ. of Jyväskylä, Finland | cat person 🐈
Assistant Professor, Integrative ecologist | thermal ecology, biodiversity, seafood & human health. She/her.
https://www.bernhardtlab.org/
UC Davis. Developmental drivers of individuality in the Amazon molly. Nature through nurture and a lot of noise. Really into random effects. Hard no to autocrats
Associate Prof at University of Colorado. I study the effects of climate change on ecosystems and people. Interested in how to effectively design and evaluate nature based solutions, evidence, and strategies for climate adaptation and conservation. She/her
Assistant Prof at Rutgers Newark and PI of the Khadlab.com. Studying insect-microbial symbiosis and microbial ecology. she/her
