Research Studentships | statistics
Come join us! We have an exciting PhD opportunity in statistical genetics at the University of Oxford.
More info here: bit.ly/biomedDPhil
ποΈ App deadline: June 30th 2025.
Please share!
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SITLabs
This project was made by the new Scientific Interface & Tooling Lab (sitlabs.org) at Oxford. We will be releasing new interfaces and tools to improve scientific productivity with an initial focus on biology research.
18.12.2024 16:56 β π 2 π 0 π¬ 0 π 0
Next we provided the variant mentions and paper context to gpt-4o-mini and requested structured output summarising the scientific finding. Finally we mapped all variants to the latest genome build and plotted them on our custom genome browser.
18.12.2024 16:56 β π 1 π 0 π¬ 1 π 0
How to download bioRxiv on a budget
To begin we downloaded 7TB's of bioRxiv+medRxiv preprints and extracted mentions of genetic variant ID's or positions. Documented in "How to download bioRxiv on a budget": sitlabs.org/writing/bior...
18.12.2024 16:56 β π 1 π 0 π¬ 1 π 0
This project started after I was trawling through Google Scholar to review a gene when I realised I had missed relevant upstream findings which hadn't been linked to the gene. I wondered if there could be a better interface to explore genetic literature?
18.12.2024 16:56 β π 1 π 0 π¬ 1 π 0
Ever get lost searching through genetic literature? We've built a new interface for bioRxiv+medRxiv to directly browse preprint findings on the genome! (1/N)
Try genorxiv: sitlabs.org/genorxiv
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nooo how am i meant to bookmark papers only to never look at them again on bsky
26.11.2024 21:44 β π 4 π 0 π¬ 1 π 0
Discover the Languages of Biology
Build computational models to (help) solve biology? Join us! https://www.deboramarkslab.com
DM or mail me!
Chief Science and Strategy Officer, openRxiv. Co-Founder, bioRxiv and medRxiv.
Solve Biology
Head of Generative Genomics, Wellcome Sanger Institute, Cambridge, UK
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http://barcelonacollaboratorium.com http://allox.bio https://www.sanger.ac.uk/programme/generative-and-synthetic-genomics/
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https://www.genetics.utah.edu/
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