Nicolas Francillonne

YouTube video by UR Genomics-Info Webinaire 2025 Soumission aux archives EMBL-EBI

Nous proposons un protocole de soumission de données aux archives EMBL-EBI. Vous pouvez visionner un webinaire à ce sujet ici www.youtube.com/watch?v=zezQ...

YouTube video by UR Genomics-Info WheatIS sharing experiences on LLM part1

We have made two WheatIS videos available based on feedback from experiences with LLMs. You can access here www.youtube.com/watch?v=kEHc... and here www.youtube.com/watch?v=4imk...

We have made public the data from WP2 of the BreedWheat project. You can find this resources here wheat-urgi.versailles.inrae.fr/Projects/Bre... with the label WP2. You can find phenotyping data, genotyping data and association data.

Venez me voir au poster 2, pour découvrir l'URGI, une plateforme bio-informatique @urgi-inrae.bsky.social
@jobim2025.bsky.social
#JOBIM2025 #URGI #INRAE

Venez découvrir #REPET, un outil de détection, de classification et d'annotation d'éléments transposables en live avec Etienne Bardet en amphi E @jobim2025.bsky.social

@urgi-inrae.bsky.social

#JOBIM2025 #URGI #INRAE

Vous êtes à #JOBIM2025 et vous avez manquez le poster de @marienewan.bsky.social sur la nouvelle version de #REPET ? Rassurez vous une demo est organisé aujourd'hui à midi en amphi E. Vous découvrirez toutes les évolutions mises en place pour vous faciliter l'annotation des #transposons

ELIXIR has released a position paper on open biodata, more information here elixir-europe.org/news/positio... or here www.linkedin.com/posts/elixir...

Michael Alaux Michael Alaux is the Deputy Director of URGI (Unit Resources Genomics-Info) at the French National Research Institute for Agriculture, Food, and Environment (IN...

Check this interview wheatgenome.org/people/leade... on IWGSC website from our Deputy Director at URGI @michaelalaux.bsky.social. His thoughts on Wheat Genomics and bioinformatics on the last few years and for the future.

The great @johannconfais.bsky.social on a reference-free approach (panREPET) to annotate #Transposons in #pangenomes 🧬

Great presentation from @johannconfais.bsky.social at #PAG2025 #PAG32 on the first result obtained with panREPET tool a non reference centric approach

REPET got a complete overhaul in version 4.0 ! Etienne Bardet from @urgi-inrae.bsky.social presents the updates in #PAG32
forgemia.inra.fr/urgi-anagen/...

Great tall from @clementgoubert.bsky.social to present GraffiTE: a pipline that finds polymorphic TE in genomes
#PAG32
github.com/cgroza/Graff...

Vanita Haurheeram will be present at #PAG2025 to introduce URGI service to FAIR research data management. Template, guidelines, repositories, data portals tool, come see her at
POSTER80

Maud Marty will be present at #PAG2025 to introduce forest tree data in FAIDARE, a plant data discovery portal. You want to discover the forest tree data generated by the french community, let her guide you through the ecosystem

After @tehub.bsky.social satellite workshop at #ICTE2024 and the creation of a working group on benchmark, what about the next step ? A manual curation workshop ? Share your thougth with the TEhub

@johannconfais.bsky.social and @clementgoubert.bsky.social are presenting @tehub.bsky.social at #PAG2025, an amazing resource and driven community for anyone interested in transposable element

#PAG32 I'd bet that every genome studied at PAG has a least 1 #Transposon, if not thousands! Find us on Sunday for an exciting session on #mobileDNA!

Great presentation from Michael Alaux in #BrAPI session #PAG2025, how the french community use BrAPI to share data between several tools

URGI will be present at PAG 2025. We will talked about pangenomics, annotation tools, Data exchange and findability using BrAPI, Data management services, Forest tree data management, check the details here urgi.versailles.inrae.fr/About-us/New...

📣 #hiringalert #JobOpening Rejoignez-nous en tant qu'ingénieur en données agronomiques @INRAE_URGI
en CDD sur Versailles ou Toulouse. Info : jobs.inrae.fr/ot-22883 @INRAE_DPT_BAP
@INRAE_France

@INRAE_IDF
@INRAE_Tlse

@Bioinf0mics

@IFB_Bioinfo
@UnivParisSaclay
@SfbiFr

C'est le moment de faire le bilan de ces 2 jours et de tracer la feuille de route pour l année à venir #BReIF #AgroDiv AgroBRC_RARe INRAE_URGI #France2030 Florilege, OLGA, IFB_Bioinfo @inrae-france.bsky.social #INRAE_DPT_BAP #INRAE_DPT_GA #INRAE_TOULOUSE

C est parti pour l AG #PEPR à Toulouse pour les projets #AgroDiv et #BReIF. Ce 10 et 11 juillet, nous allons partager et discuter des avancées des projets #France2030 AgroBRC_RARe Florilege, IFB_Bioinfo @inrae-france.bsky.social INRAE_DPT_BAP INRAE_DPT_GA

Et c est reparti, 2e journée de l atelier pangénomique
@inrae-france.bsky.social
à Versailles du SaPI PanAnnot #CATI_GREP
#CATI_BARIC @johannconfais.bsky.social
On discute des outils de pangénomique et de leur impact sur nos thématiques de travail.

Complete video and audio recording (lightly edited for time) of the 2024 TE-Hub Workshop "TE Hub workshop: developing benchmarks for TE research/methods/tool... Workshop: "developing benchmarks for TE research/bioinformatics" | ICTE24 | Saint-Malo, France

We are happy to announce that the recording of the last
#TEhub
workshop on #benchmark at
#ICTE2024
is available on our YouTube channel! youtube.com/watch?v=3qY0... Please share widely! #Transposons #TEsky

#ICTE2024 is starting #TEworldwide, INRAE-URGI is here with @johannconfais.bsky.social Somia Saidi, Héléna Vassilieff and Etienne Bardet, come see our posters and discuss

📢 #hiringalert #JobOpening #Concours Rejoignez-nous en tant qu'ingénieur développeur de pipeline d'analyse et #DevOps @INRAE_URGI sur Versailles ou Toulouse. Plus d'info sur urgi.versailles.inrae.fr/About-us/News/… @inrae-france.bsky.social

📣 #hiringalert #JobOpening #Concours Rejoignez-nous en tant qu'ingénieur développeur de pipeline d'analyse et #DevOps @INRAE_URGI sur Versailles ou Toulouse. Plus d'info sur urgi.versailles.inrae.fr/About-us/New... @INRAE_DPT_BAP @INRAE_France @INRAE_IDF @INRAE_TLSE @BIOINFOMICS @IFB_Bioinfo