Jamie M. Kass's Avatar

Jamie M. Kass

@ndimhypervol.bsky.social

Associate Professor at Tohoku University, Japan. I run the Macroecology Lab: https://macroecolab.github.io/ We model species' distributions and biodiversity patterns and make predictions over space and time. (ported my old tweets here)

167 Followers  |  49 Following  |  226 Posts  |  Joined: 22.11.2024  |  2.4621

Latest posts by ndimhypervol.bsky.social on Bluesky

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Historical biogeography and climatic niche dynamics in spiny lizards of the genus Sceloporus (Squamata: Phrynosomatidae) Abstract. Although we now have extensive biogeographical datasets for tetrapods, unravelling the drivers of speciesโ€™ distributions remains challenging, esp

Interested in the biogeography of lizards?๐ŸฆŽ

We studied the historical biogeography of Sceloporus lizards and the link between their dispersal and climatic niches ๐ŸŒŽ๐ŸŒฆ๏ธ @fabrovillalobos.bsky.social @ndimhypervol.bsky.social @biojlinnsoc.bsky.social

Learn more here ๐Ÿ‘‡:
academic.oup.com/biolinnean/a...

07.11.2025 18:52 โ€” ๐Ÿ‘ 19    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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Uncertainty in Ecological Models Estimating long-term trends in ecological communities requires that we have some model of how organisms relate to changes in environmental factors such as temperature, precipitation, and land use. Exp...

So happy for this one to finally come out: I wrote a book chapter on uncertainty in ecological models with Alke Voskamp, Lukas Baumbach, and Jamie Kass (@ndimhypervol.bsky.social) for a massive new open access book on uncertainty in climate change research.

link.springer.com/chapter/10.1...

16.07.2025 21:42 โ€” ๐Ÿ‘ 5    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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We are thrill to have @ndimhypervol.bsky.social be this month's Funk lecture speaker! To learn more and to register, please visit our website: www.biogeography.org/news/news/ju...

02.06.2025 17:54 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Really great work. This is a great open canvas for the next gen of shiny modeling apps.

11.02.2025 01:32 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@ecography.bsky.social Linking this to Ecography's bsky account~

25.11.2024 06:07 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Achieving higher standards in species distribution modeli... There are many tools for species distribution modeling in...

link:

https://doi.org/10.6084/m9.figshare.27312903

21.11.2024 09:51 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@EcographyJourna The tutorials cover common SDM tasks: climate change range shift predictions, estimating invasion risk for alien species, and modeling ranges of rare species with low data. The files are available in the suppl. info in the paper, but also from this...

21.11.2024 09:51 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

next.

21.11.2024 09:51 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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@EcographyJourna We go through a SDM workflow and explain all the tools we can use from various pkgs for each step, highlighting how they can work well in unison. We also use sdmverse to show the main functional groups for SDM pkgs, and give suggestions on where pkg dev should go...

21.11.2024 09:51 โ€” ๐Ÿ‘ 0    ๐Ÿ” 1    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
GitHub - sylvainschmitt/sdmverse: sdmverse is a collabora... sdmverse is a collaborative metapackage for listing all t...

#RStats

https://github.com/sylvainschmitt/sdmverse

21.11.2024 09:50 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@EcographyJourna The sdmverse meta pkg provides documentation on SDM pkg attributes, plotting tools to visualize pkg relationships, and a shiny app. It is built to grow with community contributions and uses volunteer reviews to verify additions. #openscience...

21.11.2024 09:50 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

tutorials.

https://doi.org/10.1111/ecog.07346

21.11.2024 09:49 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0

Check out our new paper in @EcographyJourna! A big team of #R pkg developers, we show how to improve analysis standards by using different pkgs for species distribution models together, a new pkg to catalog and explore them, and 3 extensive...

21.11.2024 09:49 โ€” ๐Ÿ‘ 4    ๐Ÿ” 1    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1


https://www.naturepositive-hub.jp/en/
https://www.nies.go.jp/biology/snapshot_japan/en/

21.08.2024 05:41 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Just back from Minamisanriku on the NE coast where my lab and collabs installed wildlife cameras, microclimate sensors, and sound recorders to monitor biodiversity in beautiful mountain forests. We are all happy, but <exhausted>....

21.08.2024 05:41 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
404 ERROR Career support portal site for all researchers and resear...

below.
https://jrecin.jst.go.jp/seek/SeekJorDetail?id=D124071200&ln=1

12.08.2024 02:10 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

REMINDER: The Macroecology Lab @TohokuUniPR is hiring a postdoc. Applicants should be proficient in species distribution modeling, GIS, and R. If interested, please DM or email (if making the deadline is difficult, please reach out). Details in link...

12.08.2024 02:10 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
404 ERROR ใ‚คใƒŽใƒ™ใƒผใ‚ทใƒงใƒณๅ‰ตๅ‡บใ‚’ๆ‹…ใ†็ ”็ฉถไบบๆใฎใŸใ‚ใฎใ‚ญใƒฃใƒชใ‚ขๆ”ฏๆดใƒใƒผใ‚ฟใƒซใ‚ตใ‚คใƒˆ

ใƒชใƒžใ‚คใƒณใƒ‰๏ผšๆฑๅŒ—ๅคงใฎใƒžใ‚ฏใƒญ็”Ÿๆ…‹ๅˆ†้‡Žใฏใƒใ‚นใƒ‰ใ‚ฏใ‚’ๅ‹Ÿ้›†ใ—ใฆใ„ใพใ™ใ€‚็จฎๅˆ†ๅธƒใƒขใƒ‡ใƒซใ‚„ใ€GISใ€Rใชใฉใฎ็ตŒ้จ“ใƒป่ƒฝๅŠ›ใ‚’ๆฑ‚ใ‚ใพใ™ใ€‚ใ”่ˆˆๅ‘ณใŒใ‚ใ‚Œใฐ็งใซDMใ‹ใƒกใƒผใƒซใ—ใฆใใ ใ•ใ„ใ€‚่ฉณ็ดฐใฏไปฅไธ‹ใฎใƒชใƒณใ‚ฏใงใ™ใ€‚ ใฉใ†ใžใ‚ˆใ‚ใ—ใใŠ้ก˜ใ„ใ—ใพใ™ใ€‚
๏ผˆใŠ็›†ไผ‘ใฟใชใฎใง็ท ๅˆ‡ใŒ้›ฃใ—ใ‘ใ‚ŒใฐDMใ—ใฆใใ ใ•ใ„๏ผ‰
https://dir.lat/hwghcF

12.08.2024 02:05 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
404 ERROR Career support portal site for all researchers and resear...

below.

https://jrecin.jst.go.jp/seek/SeekJorDetail?id=D124071200&ln=1

16.07.2024 23:57 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

The Macroecology Lab is hiring a postdoc. Applicants should be proficient in species distribution modeling, GIS, and R. Those who want to do research in an international env. are esp. welcome. If interested, please DM or email me. Details in link...

16.07.2024 23:57 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
404 ERROR ใ‚คใƒŽใƒ™ใƒผใ‚ทใƒงใƒณๅ‰ตๅ‡บใ‚’ๆ‹…ใ†็ ”็ฉถไบบๆใฎใŸใ‚ใฎใ‚ญใƒฃใƒชใ‚ขๆ”ฏๆดใƒใƒผใ‚ฟใƒซใ‚ตใ‚คใƒˆ

ๆฑๅŒ—ๅคงใฎใƒžใ‚ฏใƒญ็”Ÿๆ…‹ๅˆ†้‡Žใฏใƒใ‚นใƒ‰ใ‚ฏใ‚’ๅ‹Ÿ้›†ใ—ใฆใ„ใพใ™ใ€‚็จฎๅˆ†ๅธƒใƒขใƒ‡ใƒซใ‚„ใ€GISใ€Rใชใฉใฎ็ตŒ้จ“ใƒป่ƒฝๅŠ›ใ‚’ๆฑ‚ใ‚ใพใ™ใ€‚ๆ—ฅๆœฌ่ชžใƒป่‹ฑ่ชžใฎๅ›ฝ้š›็š„ใช็’ฐๅขƒใง็ ”็ฉถใ—ใŸใ„ไบบใฏๅคงๆญ“่ฟŽใงใ™ใ€‚ใ”่ˆˆๅ‘ณใŒใ‚ใ‚Œใฐ็งใซDMใ‹ใƒกใƒผใƒซใ—ใฆใใ ใ•ใ„ใ€‚่ฉณ็ดฐใฏไปฅไธ‹ใฎใƒชใƒณใ‚ฏใซใ‚ใ‚Šใพใ™ใ€‚ ใฉใ†ใžใ‚ˆใ‚ใ—ใใŠ้ก˜ใ„ใ—ใพใ™ใ€‚

https://dir.lat/rscI9V

16.07.2024 23:55 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
ใ‚ใชใŸใฎๅฃฐใŒใƒใ‚ซใƒฉใซใชใ‚Šใพใ™ ๆ—ฅๆœฌใฎๆœชๆฅใฎใŸใ‚ใซใ€ ็ง‘ๅญฆ็ ”็ฉถ่ฒปๅŠฉๆˆไบ‹ๆฅญ๏ผˆ็ง‘็ ”่ฒป๏ผ‰ใฎๅข—้กใ‚’ๆฑ‚ใ‚ใพใ—ใ‚‡ใ†๏ผ

ใ“ใฎใ‚ชใƒณใƒฉใ‚คใƒณ็ฝฒๅใซ่ณ›ๅŒใ‚’ใŠ้ก˜ใ„ใ—ใพใ™๏ผใ€Œๆ—ฅๆœฌใฎๆœชๆฅใฎใŸใ‚ใซใ€ ็ง‘ๅญฆ็ ”็ฉถ่ฒปๅŠฉๆˆไบ‹ๆฅญ๏ผˆ็ง‘็ ”่ฒป๏ผ‰ใฎๅข—้กใ‚’ๆฑ‚ใ‚ใพใ—ใ‚‡ใ†๏ผใ€ https://chng.it/t2MQ4jTphp via @change_jp

13.07.2024 07:34 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Easily the most creative #biogeography study I've seen in a while. Question: how do the geographic distributions of trickster animals in folklore compare to those of the real reference species? @royalsociety

https://doi.org/10.1098/rsos.231577

10.05.2024 00:26 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
x.com

https://twitter.com/ndimhypervol/status/1724611646210085073

03.04.2024 00:29 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Our paper about using SDMs and other biodiv models to predict and map ecosystem services is now published in an issue at @Trends_Ecol_Evo!
https://doi.org/10.1016/j.tree.2023.10.011
Also, just secured a JSPS grant (ๅŸบ็›คC) to implement these ideas! More to come soon......

03.04.2024 00:29 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Last week we had a great kickoff meeting for a grant to build a new marine science research center at @TohokuUniPR with @JAMSTEC_PR~
My lab will be participating in <biodiversity modeling>!
I joined the panel disc. about long-term monitoring, stability, and societal impacts.

11.03.2024 06:05 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Visited @OISTedu to work with @SamRPJRoss and colleagues on our SHINKA grant research on response diversity of lake plankton communities. Hardly felt like I'd been gone a while, let alone nearly a whole year... Hope to come again soon!

View from the new Lab 5 building~

16.02.2024 13:50 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Cutting-edge Biodiversity Models Will Help Assess Nature'... Advancements in these models will enable scientists to be...

https://www.tohoku.ac.jp/en/press/cuttingedge_biodiversity_models_help_assess_natures_vital_contribution_to_people.html
Grad School of #LifeSciences: https://www.lifesci.tohoku.ac.jp/en/date/detail---id-51687.html

13.12.2023 05:40 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Press release w/ brief summary of our paper on biodiversity models for predicting nature's contributions to people, out in @Trends_Ecol_Evo.
With K. Fukaya, @Wil_Thuiller, & @AkiraSMori

@TohokuUniPR:...

13.12.2023 05:40 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Hey #R friends, in my pkg I'm trying to call an S4 method for predict() specified in another pkg, but unless I load this pkg it doesn't work. This method isn't exported by its pkg. How do I specify this method in NAMESPACE? Is there some other way? Thanks!
@rstatstweet #ecology

26.11.2023 09:07 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@ndimhypervol is following 20 prominent accounts