Ondrej Mottl πŸŒΏπŸ’»πŸ“ˆπŸŒβ³'s Avatar

Ondrej Mottl πŸŒΏπŸ’»πŸ“ˆπŸŒβ³

@ondrejmottl.bsky.social

Assistant Professor at the Department of Botany🌿 , Charles University. Head of Laboratory of Quantitative Ecology (bit.ly/CUNI_QuantitativeEcology) with a main focus on #communityecology 🏞️, #palaeoecology πŸ•°οΈ, and interest in #datascience πŸ’».

870 Followers  |  257 Following  |  165 Posts  |  Joined: 07.12.2023  |  1.9171

Latest posts by ondrejmottl.bsky.social on Bluesky

I have to admit that I love to make notes as readingπŸ˜…. However, I will consolidate/delete/adjust my notes into reviewer comments after finishing my notesπŸ™†

10.12.2025 16:56 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

You can place tests anywhere. My method is to have a 'test_all.R' script that set up the environment and then run testthat::test_dir(here::here(<path to folder with tests>)

08.12.2025 18:28 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Looking forward to seeing you in Aarhus!

07.12.2025 20:55 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Daily News: R-devel/NEWS

%notin% coming soon to an #rstats environment near you 🀩

developer.r-project.org/blosxom.cgi/...

06.12.2025 07:57 β€” πŸ‘ 104    πŸ” 16    πŸ’¬ 1    πŸ“Œ 10
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Unlocking Palaeo-Historical Biodiversity Data to Inform Ecological Baselines through AI at University of Reading on FindAPhD.com PhD Project - Unlocking Palaeo-Historical Biodiversity Data to Inform Ecological Baselines through AI at University of Reading, listed on FindAPhD.com

Interested in Historical Ecology and Conservation Palaeobiology? πŸͺΈπŸ¦€

Steve Pates and I are offering a PhD project on Unlocking Palaeo-Historical Biodiversity Data to Inform Ecological Baselines @es-ucl.bsky.social
@uclcber.bsky.social

πŸ—“οΈ Apply by 19th January 2026

www.findaphd.com/phds/project...

04.12.2025 10:40 β€” πŸ‘ 8    πŸ” 14    πŸ’¬ 0    πŸ“Œ 1

I am very happy and honoured to be part of #JuniorFaculty

03.12.2025 19:26 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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β€˜Anyone hired a student before?’ How a group of novice lab leaders are supporting each other By creating a network of early-career principal investigators, my colleagues and I have enacted change and battled bureaucracy.

Our article on the #JuniorFaculty initiative is now online!

β€˜Anyone hired a student before?’ How a group of novice lab leaders are supporting each other www.nature.com/articles/d41...

03.12.2025 17:21 β€” πŸ‘ 6    πŸ” 1    πŸ’¬ 0    πŸ“Œ 2

You are not the only one. For some reason, I find GH Actions super daunting and expensive problems all the time...

02.12.2025 05:11 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Hey #Rstats do you know any cool R-related #podcast?
I am interested in #programming #DS #reproducibility #software #development etc
Preferably to be available on #spotify
#Rlang #rstat

26.11.2025 19:18 β€” πŸ‘ 6    πŸ” 2    πŸ’¬ 2    πŸ“Œ 0

That is the reason to always state namespace (or how one would call it). For example dplyr::select() and MASS::select(). I prefer to read such code, as I find out what function is from which package (especially if I do not know the package)
#Rstats

25.11.2025 21:06 β€” πŸ‘ 5    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Paleo folks: Please recommend researchers (incl yourselves) interested in phylogenetic reconstruction in deep time, molecular clocks (discord w/ fossil clocks), foundational/methodological issues in phylo/paleo-reconstruction & who'd be interested in hanging w/ historians & philosophers of science βš’οΈ

24.11.2025 00:02 β€” πŸ‘ 70    πŸ” 43    πŸ’¬ 12    πŸ“Œ 0
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Calling all experts on #tropicalpeatlands! πŸ“’Submit your abstracts to our session at #EGU26. meetingorganizer.copernicus.org/EGU26/sessio... Apply by 01.12.25 for travel support!- egu26.eu/authors/fina...
@nickgirkin.bsky.social
@egu.eu
@sciencecharles.bsky.social

24.11.2025 11:22 β€” πŸ‘ 2    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Malloc

I have found out that he has another channel dedicated to programming in C
youtube.com/@codeaesthet...

22.11.2025 15:25 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

CodeAestheticΒ is amazing (I have been recommending it to my students)!!! Sadly there is no new contentπŸ˜“

22.11.2025 11:59 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

I have a cable-less keyboard (turned off) just for my kid to let them "work" while I am at the home officeπŸ˜…

22.11.2025 09:02 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Show us you target map!

19.11.2025 05:07 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Screenshot of the OpenMoji project homepage. The text says OpenMoji 16.0.0 Open source emojis for designers, developers and everyone else! with a Search emoji box below and a lot of random emojis scattered on the page.

Screenshot of the OpenMoji project homepage. The text says OpenMoji 16.0.0 Open source emojis for designers, developers and everyone else! with a Search emoji box below and a lot of random emojis scattered on the page.

I don't think this science communication resource gets enough love.

OpenMoji offers 4,000+ free, #opensource emojis (CC BY-SA 4.0), with categories for healthcare, climate, UI...

Challenge: find Greta Thunberg and a Viennese coffee house. β˜•

πŸ”— openmoji.org #SciComm #Design

18.11.2025 10:41 β€” πŸ‘ 43    πŸ” 19    πŸ’¬ 1    πŸ“Œ 2

🀯

18.11.2025 17:40 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Interpolation with glue β€” str_glue These functions are wrappers around glue::glue() and glue::glue_data(), which provide a powerful and elegant syntax for interpolating strings with {}. These wrappers provide a small set of the full op...

I was aware of {glue} but did not want to add another package to the stack. However, why I am only now finding out about 'str_glue()'? I could have been using it already!
stringr.tidyverse.org/reference/st...

18.11.2025 07:13 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

My reviews are generally structured very differently but I might give it a shot.

18.11.2025 04:38 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Ecology, Evolution and Behavior The Ecology, Evolution and Behavior graduate program at The University of Texas at Austin is top-10 ranked.

Like math and plant community ecology?

I am recruiting one or two new Ph.D. students to work on theory and its integration with data in the areas of forest dynamics, species coexistence, or plant community ecology more generally.

Deadlines for the EEB and Plant Biology programs are Dec. 1.

17.11.2025 20:37 β€” πŸ‘ 29    πŸ” 33    πŸ’¬ 1    πŸ“Œ 0

This looks cool! As not all co-authors are happy making GH PR, this might be a good solution. Has anyone actually used it?

18.11.2025 04:19 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

This is the talk I needed in my life!!!

11.11.2025 19:22 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

I do it so that I have that information available whenever I need it (which ia mostly for grant proposals)

10.11.2025 19:25 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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renv – RStudio User Guide

{renv} is the package you need that you never know you needed

For easy to get up and running and honestly makes your life exceptionally easy.

docs.posit.co/ide/user/ide...

06.11.2025 00:16 β€” πŸ‘ 25    πŸ” 3    πŸ’¬ 3    πŸ“Œ 0
The two buttons meme, the first button reads "answering emails", the second one reads "playing with experimental R packages"

The two buttons meme, the first button reads "answering emails", the second one reads "playing with experimental R packages"

#rstats

08.10.2025 10:35 β€” πŸ‘ 20    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1
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The best scientific talk advice that gets ignored Here are some prescriptions for a case of UCPS (Unengaging Conference Presentation Syndrome).

I find there's a huge mismatch between the standard advice that people give about scientific conference talks, and how people actually give talks.

So I picked out the most important pieces of advice that are most often ignored. πŸ§ͺ

28.10.2025 21:24 β€” πŸ‘ 132    πŸ” 32    πŸ’¬ 12    πŸ“Œ 9
Venn diagrams as jack-o-laterns showing trick/treat logicals: OR, AND, XOR, NOR, NAND, and XNOR

Venn diagrams as jack-o-laterns showing trick/treat logicals: OR, AND, XOR, NOR, NAND, and XNOR

Halloween logicals, still the best 10/31 venn

31.10.2025 22:52 β€” πŸ‘ 231    πŸ” 74    πŸ’¬ 1    πŸ“Œ 2

What distro are you using? Have you tried Omarchy?

01.11.2025 10:18 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

{targets} makes you feel bad when a job is done, because those computers are now being very lazy #rstats

01.11.2025 04:41 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

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