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Chris Oostenbrink

@mms-boku.bsky.social

Computational chemist at the Institute for Molecular Modeling and Simulation at BOKU in Vienna.

638 Followers  |  151 Following  |  47 Posts  |  Joined: 17.11.2023  |  1.9809

Latest posts by mms-boku.bsky.social on Bluesky

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#circularbioengineering #circulareconomy #sustainability #bioengineering #researchcommunity #austriaresearch #collaboration #excellentaustria #researchinnovation #scienceforsustainability | Cluster of... 🌀️ Day 2 of the Circular Bioengineering Retreat Sessions continued at the stunning Sky Lounge of the University of Vienna, with presentations from programs and units within the Cluster of Excellence i...

The last 2 days, researchers of @bokuvienna.bsky.social TU Vienna @tugraz.bsky.social @univie.ac.at Uni Graz met to kick off the Excellence Cluster Circular Bioengineering.
Great science in the pipeline, funded by @fwf-at.bsky.social

20.11.2025 07:39 β€” πŸ‘ 13    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
Dominik presenting a slide with β€œQM/MM simulations in a nutshell”

Dominik presenting a slide with β€œQM/MM simulations in a nutshell”

Our PhD student Dominik HΓΆrtnagel presented the plans for his PhD project at our first Cluster of Excellence for Circular Bioengineering retreat! A great first impression of our #excellence=austria cluster @fwf-at.bsky.social

#circularbioengineering #compchem

See circularbioengineering.boku.ac.at

17.11.2025 17:47 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Post image

In the latest @livecomsjournal.bsky.social
perpetual review, Cavender et al overview NMR and crystallographic experimental datasets that can be used to benchmark protein force fields, including best practices for setup and analysis of simulations!:
livecomsjournal.org/index.php/li...

#compchem

28.10.2025 15:35 β€” πŸ‘ 18    πŸ” 7    πŸ’¬ 2    πŸ“Œ 2

Looking forward to visit colleagues in Vienna and Graz πŸ‡¦πŸ‡Ή

If you’re in Vienna I’m speaking on:

Prediction and Design of Intrinsically Disordered Proteins and Condensates (27/10 ISTA)

&

Understanding the Effects of Missense Variants Using Analyses of Protein Stability and Conservation (30/10 VBC)

26.10.2025 06:40 β€” πŸ‘ 19    πŸ” 5    πŸ’¬ 0    πŸ“Œ 1
A watercolor rendering of a combined electrochemical reduction of CO2 to methanol with yeast based conversion of methanol to chemicals

A watercolor rendering of a combined electrochemical reduction of CO2 to methanol with yeast based conversion of methanol to chemicals

8 PhD projects announced in a joint programme of BOKU University @bokuvienna.bsky.social TU Vienna @tuwien.at University Vienna @univie.ac.at on Green Chemistry!
Check details via the link ⬇️
The first 2 projects will be realised in my lab at BOKU.
www.tuwien.at/greenchem/en...

06.10.2025 13:54 β€” πŸ‘ 7    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0
Preview
Glucose Oxidase Initiates Radical Polymerizations by Direct Electron Transfer to Monomers Glucose oxidase (GOx) is a widely used and studied enzyme, yet it continues to surprise with previously unknown activities. We report GOx to initiate radical polymerizations of acrylamides and methacr...

This is a paper by Eleonora Ornati and Iiulia Ushakova that I am really proud of. Who would have thought that the well-known Glucose Oxidase is up for some surprises, i.e., that it initiates radical polymerizations without the need for initiators or activation by light!
pubs.acs.org/doi/full/10....

01.10.2025 17:47 β€” πŸ‘ 7    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0

Very happy to see version 2.0 of our advanced GROMOS tutorials out in LiveCoMS today! It shows how we can keep a tutorial up to date with the latest developments, but without having to start from scratch. A big β€˜thank you’ to all co-authors for their work!

#compchem

30.09.2025 17:42 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Preview
Biomolecular Modeling: Goals, Problems, Perspectives Present day biomolecular modeling is limited in its application by four main problems: 1) the force-field problem, 2) the search problem, 3) the ensemble problem, and 4) the experimental problem. The...

Cool! It seems to be in line with the prediction of Wilfred van Gunsteren in 2006 in Angewandte. He predicted that we can do a whole human body for one second in the year 2172.

doi.org/10.1002/anie...

26.09.2025 20:09 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Edgar Galicia AndrΓ©s presenting his talk on the Impact of Computer Simulations in Soil Science

Edgar Galicia AndrΓ©s presenting his talk on the Impact of Computer Simulations in Soil Science

Great start of the #MMSoilSci Symposium with a Keynote by Edgar Galicia AndrΓ©s on the Impact of Computer Simulations in #SoilScience followed by talks from Hessam Yazdani, Hannah Pollak, Milan PΕ™edota, and SΓ©bastien Le Crom.
#MolecularModeling @bokuvienna.bsky.social

www.cecam.org/workshop-det...

24.09.2025 21:40 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Signpost to the symposium

Signpost to the symposium

Get together at BOKU University

Get together at BOKU University

Looking forward to three days of the International Symposium 2025 on Molecular modeling in soil science – achievements and perspectives #MMSoilSci hosted at @bokuvienna.bsky.social

www.cecam.org/workshop-det...

24.09.2025 12:37 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
The hunting horn group of BOKU University β€œGregor Mendl”

The hunting horn group of BOKU University β€œGregor Mendl”

Our rector, Eva Schulev-Steindl, welcomes the international community of molecular soil modellers to BOKU University!

Our rector, Eva Schulev-Steindl, welcomes the international community of molecular soil modellers to BOKU University!

Our @cecamevents.bsky.social meeting on Molecular Modeling in Soil Science got started with the BOKU Hunting Horn Group and a welcome address by our Rector! Very excited about the program of the next days!

@bokuvienna.bsky.social #compchem #mmsoilsky

24.09.2025 12:26 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 1

Good luck!

23.09.2025 09:44 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Congratulations to both you and to the university of Freiburg! Welcome to Europe!

15.09.2025 19:22 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

FΓΌr unsere Stabsstelle am Department fΓΌr Naturwissenschaften und nachhaltige Ressourcen suchen wir ein*e Office Manager*in im Bereich Forschung. Deadline am 18.9.! Join a great team @bokuvienna.bsky.social

boku.ac.at/fileadmin/da...

11.09.2025 11:42 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Johannes in front of one of his slides about the integration of experiments and simulation

Johannes in front of one of his slides about the integration of experiments and simulation

This week, Johannes @jostoe.bsky.social did a brilliant job at presenting and defending his PhD thesis. It was pleasure to listen to the great discussion with examiners @sykhalid.bsky.social and Christian SchrΓΆder. Congratulations, Johannes!!

#compchem πŸ’»πŸ§ͺ
@bokuvienna.bsky.social

06.09.2025 09:46 β€” πŸ‘ 14    πŸ” 1    πŸ’¬ 1    πŸ“Œ 1
Biochemie / Biochemistry::BOKU

BOKU University in Vienna is recruiting a full professor for Biochemistry! Check out the description below, apply and join us in beautiful Vienna.
@bokuvienna.bsky.social
πŸ§ͺπŸ§ͺπŸ§ͺ

short.boku.ac.at/53e6g6

25.08.2025 07:19 β€” πŸ‘ 11    πŸ” 14    πŸ’¬ 1    πŸ“Œ 0

About one week left to apply for this PhD position in my group! Are you a computational chemist, with an interest in protein-protein interactions? Apply soon and join us in beautiful Vienna!

#compchem πŸ§ͺ @bokuvienna.bsky.social
@biotop-phd.bsky.social

15.08.2025 06:15 β€” πŸ‘ 13    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0
Table of contents figure

Table of contents figure

Our latest Best Practices article "Developing Monte Carlo Methodologies in Molecular Simulations" is out now and describes how to derive acceptance probabilities for a variety of Monte Carlo moves:
doi.org/10.33011/liv...

#compchem

11.08.2025 18:32 β€” πŸ‘ 15    πŸ” 8    πŸ’¬ 1    πŸ“Œ 0
banner informing about the conference Recombinant Protein Production RPP12, 7-9 October 2025, in Ulm in Germany

banner informing about the conference Recombinant Protein Production RPP12, 7-9 October 2025, in Ulm in Germany

Just 5 more days to register and submit your abstract!
If you are working on Recombinant Protein Production, RPP12 is the conference to go! Oct. 7-9, Ulm, Germany.
Abstract submission and early bird registration still open until August 15!
www.efbiotechnology.org/RPP

11.08.2025 12:39 β€” πŸ‘ 6    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
Bene in front of an image of the cover of his thesis, entitled β€˜The joys and pitfalls of accelerated enveloping distribution sampling’

Bene in front of an image of the cover of his thesis, entitled β€˜The joys and pitfalls of accelerated enveloping distribution sampling’

It’s been a while already, but PhD student Bene did a great job at defending his PhD thesis, entitled β€˜The joys and pitfalls of accelerated enveloping distribution sampling’. Congratulations, Dr. Bene!

31.07.2025 12:27 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Are you passionate about AI & molecular engineering? Just ‼️one‼️ week left to apply to the 2 PhD positions currently open in our team at Chalmers! πŸŽ“ Apply to join us in here in lovely Gothenburg, Sweden πŸ‡ΈπŸ‡ͺ🀩

For details: ailab.bio/join-us

15.07.2025 11:44 β€” πŸ‘ 8    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
Post image

Interested in enhanced sampling for molecular dynamics simulations? Check out the latest LiveCoMS tutorial on Running Gaussian-accelerated Molecular Dynamics Simulations in NAMD:

livecomsjournal.org/index.php/li...

#compchem

12.07.2025 19:55 β€” πŸ‘ 14    πŸ” 5    πŸ’¬ 2    πŸ“Œ 0
BioToP

We will have a fully funded PhD position available in the context of out doctoral program Biomolecular Technology of Proteins. The project involves simulations of protein-protein interactions. Join us in beautiful Vienna and check out biotop.boku.ac.at/application2...

#compchem

08.07.2025 16:16 β€” πŸ‘ 7    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1
Iuliia in front of a powerpoint slide describing some of her plans to continue her work at BOKU.

Iuliia in front of a powerpoint slide describing some of her plans to continue her work at BOKU.

Today, Iuliia Ushakova presented her PhD project in the context of the @metrazymes.bsky.social program. Iuliia did the first part of her PhD at the
@bruns-lab.bsky.social, and now continues @bokuvienna.bsky.social ! Thanks to the @ec.europa.eu for making this possible.

25.06.2025 18:08 β€” πŸ‘ 13    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
Preview
Roelfes group - Open Positions PhD position on Hybrid biocatalytic cascades aided by Machine learning (1.0 FTE)

πŸ“’πŸ“’πŸ“’ PhD Opportunity!

Join our research group at RUG! We're seeking a motivated PhD student for a project on biocatalytic cascade processes combining natural and designer enzymes, supported by machine learning.
Click below to learn more β€” and feel free to share!

sites.google.com/rug.nl/roelf...

12.05.2025 09:10 β€” πŸ‘ 11    πŸ” 13    πŸ’¬ 0    πŸ“Œ 1

It really was a wonderful retreat! Thanks for all the great talks and discussions.

11.05.2025 16:32 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

On show now in Venice at #UniversePavilion (in frame of #biennale)
Kristina Puljakova' wonderful piece on space survival aied by biotechnology.
The artist (2nd right) together with @bokuvienna.bsky.social scientists who worked with her during the lab residency

10.05.2025 05:59 β€” πŸ‘ 15    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

Welcome to Bluesky, BioToP! Looking forward to seeing the great BioToP-science highlighted here!

07.05.2025 15:43 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

It was a great event, where I taught and learned a lot. Very happy that Metrazymes and @ec.europa.eu made this possible. We currently have two participants visiting our lab!

06.05.2025 19:38 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

we are hiring:
Senior Scientist at the Institute of Microbiology and Microbial Biotechnology @bokuvienna.bsky.social
- experience in bacterial biotechnology
- active German knowledge necessary for undergrad teaching
Initial contract until end of 2025. Extension possible!
boku.ac.at/fileadmin/da...

01.05.2025 07:28 β€” πŸ‘ 7    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0

@mms-boku is following 20 prominent accounts