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Höfer Lab

@hoeferlab.bsky.social

The Höfer lab studies the epitranscriptomic mechanisms of gene regulation based on NAD-capped RNAs in bacteria and bacteriophages. We are located at the Max Planck Institute for terrestrial Microbiology, Marburg, Germany and area Member of SYNMIKRO

1,110 Followers  |  461 Following  |  13 Posts  |  Joined: 08.11.2024  |  2.33

Latest posts by hoeferlab.bsky.social on Bluesky

Junior Group Leader - Phage Biology & Biotechnology As a leading research institution for microbial biotechnology the Institute of Bio- and Geosciences - Biotechnology (IBG-1, https://www.fz-juelich.de/de/ibg/ibg-1 ) at the Forschungszentrum Jülich foc...

Please RT:
We have an opening for a junior group leader position in „Phage Biology & Biotechnology“.
www.fz-juelich.de/de/karriere/...

Interested candidates are encouraged to contact me via email for further details.

@spp2330.bsky.social; @mibinet.bsky.social

08.10.2025 06:50 — 👍 33    🔁 52    💬 0    📌 1
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Many thanks to Katharina Höfer @hoeferlab.bsky.social for giving an inspiring presentation about RNAylation at our annual "Early-Career Microbiologists Symposium" @johninnescentre.bsky.social. Many thanks also to #EMBO @embo.org for supporting this "Young Investigator Seminar".

16.09.2025 06:44 — 👍 22    🔁 4    💬 0    📌 0
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Rethinking RNA-binding proteins: Riboregulation challenges prevailing views The advent of system-wide proteomic approaches has largely expanded the number of RNA-binding proteins (RBPs). This review discusses how recent discoveries are transforming our understanding of biolog...

Regulation by RNAs might be even more extensive than we thought. Many enzymes and other proteins not previously considered as RNA-binding proteins do seem to fall into this class & might have their activity regulated by RNA.
www.cell.com/cell/fulltex...

05.09.2025 15:49 — 👍 52    🔁 22    💬 2    📌 2

This demanding fieldwork is coming to an end – we are excited to dig into the collected samples and data!

Learn more about the research behind the fieldwork here:
mpi-bremen.de/en/Max-Planc...

#CAPSOLUTION @fischerlab.bsky.social @sumayrasultanji.bsky.social @hoeferlab.bsky.social

18.08.2025 11:21 — 👍 8    🔁 2    💬 0    📌 0
Lac de Louvie with the snow-covered Grand Combin in the background.

Lac de Louvie with the snow-covered Grand Combin in the background.

Merci beaucoup à ALTIS et M. Olivier!

Merci beaucoup à ALTIS et M. Olivier!

A somewhat tricky location for our setup, but it worked!

A somewhat tricky location for our setup, but it worked!

The samples are all bagged and cooled.

The samples are all bagged and cooled.

Lac de Louvie (2213 m elevation) was an incredibly stunning place to sample for microbes! Many thanks to altis.swiss for letting us use their maintenance cable car :)
#CAPSOLUTION
@mpimarinemicrobio.bsky.social
@erc.europa.eu
@hoeferlab.bsky.social
@maxemilschon.bsky.social

12.08.2025 19:34 — 👍 11    🔁 4    💬 1    📌 0
Lac de Champex in Champex-Lac, a popular tourist destination in summer and winter.

Lac de Champex in Champex-Lac, a popular tourist destination in summer and winter.

Keeping the samples cool was a new, but weclome challenge for us on this trip.

Keeping the samples cool was a new, but weclome challenge for us on this trip.

The largest one of the lacs de Fenêtre, with the Mont Blanc massif just visible on the far right.

The largest one of the lacs de Fenêtre, with the Mont Blanc massif just visible on the far right.

Our fantastic sampling crew for the Swiss leg!

Our fantastic sampling crew for the Swiss leg!

Switzerland welcomed us with summer weather and beautiful mountains! We started with the Lac de Champex (1467 m) which is influenced by human activity, and then hiked up to the Lacs de Fenêtre (2465 m) the next day.
#CAPSOLUTION
@mpimarinemicrobio.bsky.social @erc.europa.eu @hoeferlab.bsky.social

10.08.2025 15:04 — 👍 8    🔁 1    💬 0    📌 0
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Research Group Leader in Chemical/Synthetic Biology at MRC Laboratory of Molecular Biology Start your UK & international job search for academic jobs, research jobs, science jobs and managerial jobs in leading universities and top...

We are looking to recruit a tenure track group leader in the field of Chemical/Synthetic Biology (in the broadest sense) to lead a research program within the Division of Protein & Nucleic Acid Chemistry ( www.jobs.ac.uk/job/DNW809/r... ) at the MRC Laboratory of Molecular Biology (LMB).

14.07.2025 12:09 — 👍 27    🔁 33    💬 1    📌 4
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Applications are now open! We are recruiting 20 Assistant Professors in a wide range of subject areas. We're looking for early-career researchers with strong scientific merits and future potential.
🔗 All positions: ki.se/en/about-ki/...

25.06.2025 10:00 — 👍 100    🔁 98    💬 0    📌 3
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Excited about #ubiquitin and #TPD ?
Then join us tomorrow for the latest instalment of the @danafarber.bsky.social ‬ Targeted Protein Degradation Webinar where Kimberly Stegmaier and I will present our latest work.
dfci.zoom.us/webinar/regi...

25.06.2025 21:08 — 👍 12    🔁 5    💬 0    📌 0

Happy to announce the first paper from my PhD at Korbel group at @embl.org has finally been published:
embopress.org/doi/full/10.1038…
Collaborating with @typaslab.bsky.social, @hennig-lab.bsky.social and the EMBL PEPCF, we designed de novo inhibitors to a bacterial phage defense system 1/🧵

19.06.2025 08:10 — 👍 30    🔁 7    💬 2    📌 3

Presenting RISoTTo, a molecular context-aware model for RNA sequence design, building on our work with PeSTo (for protein binding interface prediction) and CARBonAra (for protein design).

📄 Preprint: www.biorxiv.org/content/10.1...
💻 Code & more coming soon!

#RNAdesign #RNAbiology #AI4Science

22.06.2025 09:02 — 👍 18    🔁 4    💬 1    📌 2

#phage #phagesky

12.06.2025 12:34 — 👍 4    🔁 2    💬 0    📌 0
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🔛LOEWE-RobuCop ist online, auch bei proloewe.de !🎯 Ziel von RobuCop @unimarburg.bsky.social ist es, die natürlich Mecha­nis­men d. CO2-Fixierung, Stressantwort-+Resilienz-Mechanismen im Chloro­plasten grundleg. zu🔬untersuchen, um robuste Photo­synthese zu ermöglichen.
➡️ proloewe.de/de/loewe-vor...

10.06.2025 08:06 — 👍 8    🔁 2    💬 0    📌 1
Picture of a lot of us nucleic acid chemists in cesky krumlov

Picture of a lot of us nucleic acid chemists in cesky krumlov

What do you call a group of nucleic acid chemists?

Suggestions welcome 🧬❤️

#SCNAC2025
@cjserpell.bsky.social @hoeferlab.bsky.social @boekhovenlab.bsky.social @rentmeisterlab.bsky.social @kgoepfrich.bsky.social @chlab.bsky.social

10.06.2025 07:30 — 👍 12    🔁 2    💬 5    📌 1
Michal Hocek telling us a (very big) sword will be used if we go over time on our talks...

Michal Hocek telling us a (very big) sword will be used if we go over time on our talks...

The #SCNAC2025 nucleic acid chemistry conference starting off in Czech-style by @hoceklab.bsky.social 🧬🗡

09.06.2025 07:01 — 👍 14    🔁 2    💬 1    📌 0
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RNA Canada ARN 2025: Design Contest! - RNA Canada ARN Attention RNA Artists! We have exciting news for the RNA Canada! The Outreach Committee is hosting a design contest for RNA-themed merchandise, which will be showcased at future RNA Canada ARN meeting...

Attention RNA Artists! That includes *you*!
The RNA Canada ARN Outreach Committee is hosting a design contest for RNA-themed merchandise, which will be showcased at future RNA Canada ARN meetings and sold in the RNA Canada ARN online store. Deadline June 30th
www.rnacanada.ca/rna-canada-a...

03.06.2025 19:46 — 👍 5    🔁 3    💬 0    📌 1
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Cancer-fighting immune cells could soon be engineered inside our bodies Nature - Manufacturing CAR T cells in the laboratory is expensive and time-consuming. An in vivo approach could get the powerful therapy to more people.

Manufacturing CAR T cells in the laboratory is expensive and time-consuming.

An in vivo approach could get this powerful therapy to more people
https://go.nature.com/45w5A5w

31.05.2025 15:16 — 👍 52    🔁 11    💬 2    📌 3
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YES!!!Excellent initiative #Microbes-for-Climate #M4C🦠FUNDED💲💰☺️🤩
The best?🤔The people❤️
Endless gratitude to Tobi & Anke - amazing role models❤️ Love the "thanks BBQ no matter what" spirit from the "Präsidium"! @unimarburg.bsky.social - sure it tasted better as we got it😉😂 #ProfLife #LovelyMarburg🏰❤️

24.05.2025 08:11 — 👍 37    🔁 2    💬 4    📌 1
Gruppenbild aus der Exzellenzkommission: GWK-Vorsitzender Falko Mohrs, Bundesforschungsministerin Dorothee Bär, DFG-Präsidentin Katja Becker, Wissenschaftsratsvorsitzender Wolfgang Wick.

Gruppenbild aus der Exzellenzkommission: GWK-Vorsitzender Falko Mohrs, Bundesforschungsministerin Dorothee Bär, DFG-Präsidentin Katja Becker, Wissenschaftsratsvorsitzender Wolfgang Wick.

Blick in die Exzellenzkommission.

Blick in die Exzellenzkommission.

Wir starten in den Auswahltag der #Exzellenzcluster. Heute kommt das Expertengremium u. die für Wissenschaft und Forschung zuständigen Minister*innen von Bund und Ländern zusammen. Ab ca. 17 Uhr geben GWK-Vorsitzender Falko Mohrs u. Forschungsministerin Dorothee Bär die Ergebnisse bekannt.

22.05.2025 07:53 — 👍 42    🔁 8    💬 2    📌 3
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What a lovely time at @synmikro.bsky.social!

PIs, PhD students, PostDocs and associated members of RobuCop met at the kick off meeting to share ideas, discuss projects and connect with each other🌱🫰
Can't wait for our next meeting!

Thank you @ramona-zuelch.bsky.social for the picture.

22.05.2025 07:31 — 👍 6    🔁 2    💬 1    📌 1
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A new preprint from the lab in collaboration with Feng Jiang.
www.biorxiv.org/content/10.1...
This is a thread for you if you're interested in secretion systems, phages, and evolution.

The extracellular contractile injection system (eCIS) is a mysterious microbial toxin delivery system.

14.05.2025 11:13 — 👍 54    🔁 20    💬 3    📌 3
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Excited to announce the Molecular Biology of Archaea (MBoA) 2026!

Join us in Cambridge, UK, from 6–10 July 2026 for the only international meeting dedicated to Archaea.

18.04.2025 13:56 — 👍 70    🔁 36    💬 3    📌 1
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Registration is open, look forward to seeing you!
microbialrnameeting.com

15.04.2025 10:49 — 👍 2    🔁 5    💬 0    📌 0
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What does it mean to be a woman in science 👩‍🔬?
It’s up to you: Join the 9th Women’s Careers and Networks symposium on June 4 and 5 on our Fassberg Campus to explore career opportunities and engage with experts and peers.

Learn more about #WoCaNet2025 here 👉 uni-goettingen.de/de/203891.html

15.04.2025 10:52 — 👍 13    🔁 5    💬 0    📌 0
A mathematical model of phage infection allows the extraction of key phage amplification parameters (PHORCE). Top and middle: E. coli growth curves measured by bioluminescence in the presence of the phage Bas04 at all combinations of eight different initial bacterial concentrations (1.1 × 104–1.4 × 106 mL−1, orange to blue) and 10 different initial phage concentrations (2.5 × 103–1.3 × 106 mL−1, light to dark). Bottom left: Schematic of minimal model of phage amplification. Bottom right: Comparison of observed collapse times and collapse times from the model.

A mathematical model of phage infection allows the extraction of key phage amplification parameters (PHORCE). Top and middle: E. coli growth curves measured by bioluminescence in the presence of the phage Bas04 at all combinations of eight different initial bacterial concentrations (1.1 × 104–1.4 × 106 mL−1, orange to blue) and 10 different initial phage concentrations (2.5 × 103–1.3 × 106 mL−1, light to dark). Bottom left: Schematic of minimal model of phage amplification. Bottom right: Comparison of observed collapse times and collapse times from the model.

PHORCE allows measurement of lytic #phage amplification rates in bacterial populations. @yuvalmulla.bsky.social & co use PHORCE to reveal phenotypic diversity among #Ecoli & #Paeruginosa phages; phage- #antibiotic interactions are mainly determined by the drug @plosbiology.org 🧪 plos.io/3G2myhf

09.04.2025 13:20 — 👍 8    🔁 1    💬 0    📌 0
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Transcriptomic profiling of individual bacteria by MATQ-seq - Nature Protocols Bacterial single-cell sequencing via MATQ-seq combines index sorting, random priming and rRNA depletion, and offers high cell retention and transcript capture rates, making it ideal for experiments wi...

If you want to do single-cell RNA-seq on your favourite bacterium, here‘s our detailed Nature Protocol for microbial MATQ-seq. It profiles up to 600 genes in a single bacterial cell!

www.nature.com/articles/s41...

09.04.2025 09:15 — 👍 59    🔁 34    💬 2    📌 1

And here it is, the completed BASEL collection finally published as early access in @plosbiology.org - see the thread for more details. 🤗🧬🎣

08.04.2025 04:59 — 👍 129    🔁 66    💬 7    📌 2
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Unser #GirlsDay am MPI-TM war ein unvergesslicher Tag! Wir haben tolle Mädchen kennengelernt, die sich für #Mikrobenforschung begeistern. Vielen Dank an unsere Gäste: Wir freuen uns auf Euch als zukünftige Forscherinnen! #GirlsDay #GirlsInScience #GirlsRockScience

04.04.2025 11:53 — 👍 8    🔁 1    💬 0    📌 0
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A broad-spectrum lasso peptide antibiotic targeting the bacterial ribosome - Nature A new lasso peptide antibiotic exhibits broad-spectrum activity against Gram-negative and Gram-positive bacteria by interfering with bacterial protein synthesis, is unaffected by common resistanc...

www.nature.com/articles/s41...

26.03.2025 18:06 — 👍 39    🔁 16    💬 1    📌 1
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Excited to host 900 microbiologists in Bochum

24.03.2025 12:02 — 👍 26    🔁 4    💬 1    📌 0

@hoeferlab is following 20 prominent accounts