Irene Farabella's Avatar

Irene Farabella

@iosonoirene.bsky.social

๐Ÿ’ป ๐Ÿงฌ 3D genome & RNA lovers Group Leader at Center for Human Technologies, Italian Institute of Technology | CDA @ArmeniseHarvard

321 Followers  |  713 Following  |  6 Posts  |  Joined: 12.11.2024  |  1.7764

Latest posts by iosonoirene.bsky.social on Bluesky

Are you @ the late stages of your postdoc ? Want to pursue a PI career ?

Then this ๐Ÿ‘‡๐Ÿ‘‡ is for you ! Apply for a spot @ our Talent Forum
www.helmholtz-munich.de/en/stem-cell...

Peer-networking / Career orientation and more !!!

Please distribute :) ๐Ÿ™‚

12.06.2025 12:58 โ€” ๐Ÿ‘ 19    ๐Ÿ” 20    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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New from the Dai and Li labs: Meta-learning-empowered reflective lattice light-sheet virtual structured illumination microscopy (Meta-rLLS-VSIM) offers near-isotropic resolution for fast and versatile super-resolution imaging of subcellular dynamics www.nature.com/articles/s41...

29.04.2025 19:54 โ€” ๐Ÿ‘ 13    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Design principles of cell-state-specific enhancers in hematopoiesis Screen of minimalistic enhancers in blood progenitor cells demonstrates widespread dual activator-repressor function of transcription factors (TFs) and enables the model-guided design of cell-state-sp...

Out in Cell @cp-cell.bsky.social: Design principles of cell-state-specific enhancers in hematopoiesis
๐Ÿงฌ๐Ÿฉธ screen of fully synthetic enhancers in blood progenitors
๐Ÿค– AI that creates new cell state specific enhancers
๐Ÿ” negative synergies between TFs lead to specificity!
www.cell.com/cell/fulltex...
๐Ÿงต

08.05.2025 16:06 โ€” ๐Ÿ‘ 136    ๐Ÿ” 57    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 8

Check this out! ๐Ÿ‘‡๐Ÿป๐Ÿ‘‡๐Ÿป
Amazing work on regulatory element evolution .. Bravo to all involved @arnausebe.bsky.social @mamartirenom.bsky.social but
expecially @ianakim.bsky.social โ€ฆ she is a star ๐Ÿ‘๐Ÿป๐Ÿ‘๐Ÿป

08.05.2025 04:38 โ€” ๐Ÿ‘ 5    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Perturb-tracing integrates CRISPR screening with barcode readout and chromatin tracing for loss-of-function screens, facilitating the study of chromatin folding regulators.

www.nature.com/articles/s41...

11.04.2025 14:36 โ€” ๐Ÿ‘ 5    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Read the News & Views highlighting this cool work here!

www.nature.com/articles/s41...

11.04.2025 18:02 โ€” ๐Ÿ‘ 8    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Bravo to all !! Definitely in my reading list for the weekend !!

12.04.2025 18:56 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Excited to share our latest work on how cells fold their genomes, and build mitotic chromosomes! Out in Science today!

Lots of interesting results and proposals for those interested in loop extrusion, and chromosomes!

With @golobor.bsky.social, Leonid Mirny, Bill Earnshaw labs.

See thread below:

11.04.2025 16:05 โ€” ๐Ÿ‘ 48    ๐Ÿ” 16    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
PhD Student - Structural Genomics Team (HoloGen Project) | CNAG, Centro Nacional de Anรกlisis Genรณmico MPORTANT MOBILITY RULE FOR THIS POSITION The MSCA mobility rule applies to this position: the applicant must not have resided or carried out their main activity (e.g., studies, work, research) in Spai...

Looking for a PhD in sunny Barcelona? โ˜€๏ธ๐Ÿ”ฌ
Our team is hiring a PhD student for the @hologen.bsky.social
project!

๐Ÿ“… Deadline: *Apr 20*
โš ๏ธ READ THE MOBILITY RULE FOR THIS POSITION
๐Ÿ” Please, spread the word

All the info here ๐Ÿ‘‰ www.cnag.eu/jobs/phd-stu...

#PhDlife #Genomics #HoloGen #Barcelona

08.04.2025 08:48 โ€” ๐Ÿ‘ 5    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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๐Ÿ‘‰ Our registration is open: smlms.org/registration... ๐Ÿ‘ˆ

07.04.2025 19:18 โ€” ๐Ÿ‘ 18    ๐Ÿ” 12    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2
Drosophila follicle showing retrotransposons (pink & yellow) expressed in somatic cells infecting the oocyte

Drosophila follicle showing retrotransposons (pink & yellow) expressed in somatic cells infecting the oocyte

1/ Transposable elements are often called "jumping genes" because they mobilize within genomes. ๐Ÿงฌ
But did you know they can also jump ๐˜ฃ๐˜ฆ๐˜ต๐˜ธ๐˜ฆ๐˜ฆ๐˜ฏ cells? ๐Ÿคฏ
Our new study reveals how retrotransposons invade the germline directly from somatic cells.
www.biorxiv.org/content/10.1...
A short thread ๐Ÿงต๐Ÿ‘‡

17.03.2025 11:56 โ€” ๐Ÿ‘ 544    ๐Ÿ” 259    ๐Ÿ’ฌ 11    ๐Ÿ“Œ 33

gracias Marc :)

02.04.2025 13:04 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Just apply! Amazing Lab โ˜บ๏ธ

02.04.2025 05:25 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
PhD Student - Structural Genomics Team (HoloGen Project) | CNAG, Centro Nacional de Anรกlisis Genรณmico MPORTANT MOBILITY RULE FOR THIS POSITION The MSCA mobility rule applies to this position: the applicant must not have resided or carried out their main activity (e.g., studies, work, research) in Spai...

Looking for a PhD in sunny Barcelona? โ˜€๏ธ๐Ÿ”ฌ
Our team is hiring a PhD student for the @hologen.bsky.social project!

๐Ÿ“… Deadline: Apr 20
โš ๏ธ READ THE MOBILITY RULE FOR THIS POSITION
๐Ÿ” Please, spread the word

All the info here ๐Ÿ‘‰ www.cnag.eu/jobs/phd-stu...

#PhDlife #Genomics #HoloGen #Barcelona

29.03.2025 11:02 โ€” ๐Ÿ‘ 13    ๐Ÿ” 10    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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Celebrating 10 years of our lab with a new preprint:
www.biorxiv.org/content/10.1...
How does enhancer location within a TAD control transcriptional bursts from a cognate promoter?
Experiments by Jana Tรผnnermann and modelling by Gregory Roth

29.03.2025 12:45 โ€” ๐Ÿ‘ 149    ๐Ÿ” 58    ๐Ÿ’ฌ 6    ๐Ÿ“Œ 2
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It's Day 2 of #EMBLAIOneHealth! ๐ŸŽ‰

Today, participants heard a keynote from Giorgio Metta (Italian Institute of Technology (IIT), Italy) on artificial intelligence in RNA interactions, disease prediction, and therapeutic design.

๐Ÿ“ท EMBL Photolab: Stuart Ingham

01.04.2025 15:24 โ€” ๐Ÿ‘ 3    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Postdoc in Genomic Data Science Commitment & contract: Post Doc 1 year collaboration contract, renewable Location: Centre for Human Technologies โ€“ Genoa At the Italian Institute of Technology (IIT), we are committed to advancing h...

๐Ÿงฌ Weโ€™re hiring a Postdoc in Genomic Data Science @IITalk! Join us to explore 3D genome architecture and RNAs using imaging, genomics & ML ๐Ÿ’ป๐Ÿ”ฌ๐Ÿ 
๐Ÿ’ผ Up to โ‚ฌ45k/year
โœ… PhD + Python/ML skills
โž• Experience with omics, imaging, or modelling = plus
๐Ÿ“ Genoa ๐ŸŒŠโ˜€๏ธ
๐Ÿ“ง irene.farabella@iit.it
๐Ÿ”— tinyurl.com/6z52jhr9

01.04.2025 14:33 โ€” ๐Ÿ‘ 18    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 3
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๐Ÿšจ๐Ÿšจ MEGA JOB ALERT ๐Ÿšจ๐Ÿšจ
Independent Group Leader Positions in Computational Biology @humantechnopole.bsky.social!

Are you ready to start your own lab? Do you know someone who is? Repost this + share with everyone who might want to know about it. Thanks!!! ๐Ÿ™

More details below... check it out! ๐Ÿงต 1/3

29.01.2025 10:39 โ€” ๐Ÿ‘ 57    ๐Ÿ” 63    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
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We often speak about chromatin as being accessible or inaccessible, but what does it mean? We wrote a short review on this, ๐Ÿ”ฌ focused:

sciencedirect.com/science/arti...

A big thank you to Tom Fillot for his efforts on this and to
@hansen_lab

@marcelonollmann
for their help as editors.

20.12.2024 15:46 โ€” ๐Ÿ‘ 137    ๐Ÿ” 55    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 3
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๐Ÿšจ๐Ÿšจ๐Ÿšจ

If you're a bioinformatician who loves:

๐Ÿงฌ #SingleCell #LongReadSequencing & #AlternativeSplicing
๐Ÿš€ Collaborating and travelling

Apply to work with us at the spectacular BIMSB (@mdc-berlin.bsky.social) in Berlin + @upf.edu-@crg.eu in Barcelona. Qs: www.transdevolab.com

Please RT! ๐Ÿ™

23.12.2024 15:54 โ€” ๐Ÿ‘ 25    ๐Ÿ” 28    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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Sub-cellular Imaging of the Entire Protein-Coding Human Transcriptome (18933-plex) on FFPE Tissue Using Spatial Molecular Imaging Single-cell RNA-seq revolutionized single-cell biology, by providing a complete whole transcriptome view of individual cells. Regrettably, this was accomplished only for individual, tissue-dissociated...

๐Ÿ’ฅ๐Ÿš€

www.biorxiv.org/content/10.1...

03.12.2024 23:12 โ€” ๐Ÿ‘ 10    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Like โ€˜old Twitterโ€™: The scientific community finds a new home on Bluesky After recent changes to Elon Muskโ€™s X, a gradual migration turns into a stampede

The sky is the limit again!
www.science.org/content/arti...

28.11.2024 22:53 โ€” ๐Ÿ‘ 4    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Nice job, Brian!๐Ÿ‘

19.11.2024 09:17 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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