Stefano Ghignone's Avatar

Stefano Ghignone

@steoware.bsky.social

Senior Researcher at Consiglio Nazionale delle Ricerche, Italy 🇮🇹 Unit Chief of SS Torino, Istituto per la Protezione Sostenibile delle PIante🌱 🧬💻 📚 https://orcid.org/0000-0002-2033-2286

79 Followers  |  144 Following  |  42 Posts  |  Joined: 24.11.2024  |  1.774

Latest posts by steoware.bsky.social on Bluesky

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@grafana.bsky.social and @prometheus.io #monitoring #dashboard being installed on all my machines! Pure rock!

#grafana #prometheus #nerd #ITsolutions #linux #docker

04.02.2026 23:46 — 👍 2    🔁 1    💬 0    📌 0

Let's celebrate researchers of mycorrhizas! Several awards for a variety of career stages offered by the IMS. Pls see links below

29.01.2026 14:32 — 👍 4    🔁 2    💬 0    📌 0
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Join the Fungal Biodiversity Course at the Westerdijk Fungal Biodiversity Institute and explore the amazing diversity of fungi through hands-on experience.

👩‍🔬 Discover, identify, and explore the fungal world!
https://wi.knaw.nl/CourseFungalBiodiversity

29.01.2026 09:01 — 👍 1    🔁 1    💬 1    📌 0
Course at EMBL-EBI. Data science for life scientists: hands-on machine learning for biological data. 15 – 19 June 2026. Hinxton, UK. EMBL's European Bioinformatics Institute logo.

Course at EMBL-EBI. Data science for life scientists: hands-on machine learning for biological data. 15 – 19 June 2026. Hinxton, UK. EMBL's European Bioinformatics Institute logo.

During 'Data science for life scientists' you will get hands-on training on:
– APIs and Python
– Data preprocessing and visualisation
– Core machine learning methods
– Deep learning approaches
– Large language models

Applications are open until 1 March 2026: www.ebi.ac.uk/training/eve...

🧬🖥️📊

29.01.2026 10:09 — 👍 6    🔁 7    💬 1    📌 0
Workshop "Microbial Ecology and Evolution"

Workshop "Microbial Ecology and Evolution"

🎯 Workshop "Microbial Ecology and Evolution"
🏦 Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università di Torino, Viale P.A. Mattioli 25, 10125, Torino, Italia
⏲️ February 6th, 2026

#Microbial #Ecology #Evolution #symbiosky

29.01.2026 11:03 — 👍 0    🔁 0    💬 0    📌 0

The 3D Genome of Gigaspora margarita Unveils Stable Chromatin and Nucleolar Organization and Symbiont-Dependent Genome Dynamics https://www.biorxiv.org/content/10.64898/2026.01.14.699541v1

15.01.2026 20:32 — 👍 1    🔁 1    💬 0    📌 0
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I ❤️ this little #dell guy so much 🥰

Powered by #DietPi can smoothly run #n8n and #Pi-Hole

#wyse3040 #nerd #supernerd

10.01.2026 11:53 — 👍 0    🔁 0    💬 0    📌 0
Image taken from Creative Commons slide dec in What happens when you choose closed? webinar 09July 2025. Creative Commons Licence Term Options
Attribution (BY): Credit must be given to you, the creator.
ShareAlike (SA): Adaptations must be shared under the same terms.
NonCommercial (NC): Only noncommercial use of your work is permitted, not primarily intended for monetary compensation.
NoDerivatives (ND): No derivatives or adaptations of your work are permitted.
CCBY has the most freedoms followed by CC-BY-SA, CC-BY-NC, CC-BY-ND, and CC-BY-NC-ND as the least freedom

Image taken from Creative Commons slide dec in What happens when you choose closed? webinar 09July 2025. Creative Commons Licence Term Options Attribution (BY): Credit must be given to you, the creator. ShareAlike (SA): Adaptations must be shared under the same terms. NonCommercial (NC): Only noncommercial use of your work is permitted, not primarily intended for monetary compensation. NoDerivatives (ND): No derivatives or adaptations of your work are permitted. CCBY has the most freedoms followed by CC-BY-SA, CC-BY-NC, CC-BY-ND, and CC-BY-NC-ND as the least freedom

🎓 Not all open licences are created equal!

Taylor Campbell from @creativecommons.bsky.social broke down key licence types👇

🔓 Most freedom: CC BY
⛔️ Least: CC BY-NC-ND

Your licence = your reuse rights. Choose wisely to boost impact & reach!

#ChooseOpenWebinar for live updates 💡
#MedLib #PhDsky

09.07.2025 15:30 — 👍 7    🔁 2    💬 0    📌 1
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🚀InterPro 107.0 is live!
✨Updated to Pfam 38.0
✨1,068 new InterPro entries
Explore the latest annotations and discover new protein insights.
Explore it now: interpro.ebi.ac.uk

23.10.2025 12:27 — 👍 6    🔁 5    💬 0    📌 0
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🎊 Congratulations Donato and Maria!🏅

#CNR #cnr_ipsp #Xylella
#Xylella_fastidiosa
#olive #Puglia

www.cnr.it/it/nota-stam...

15.12.2025 22:44 — 👍 0    🔁 0    💬 0    📌 0
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Origin and function of beneficial bacterial symbioses in insects Nature Reviews Microbiology - In this Review, Kaltenpoth et al. examine the evolution and function of beneficial symbioses between bacteria and their insect hosts, focusing on their effects on the...

📚Reading note:
Kaltenpoth, M., Flórez, L.V., Vigneron, A. et al. Origin and function of beneficial bacterial symbioses in insects. Nat Rev Microbiol 23, 551–567 (2025).
rdcu.be/eUK7j

#review #symbioses #insects #bugs
#SymbioSky

15.12.2025 22:17 — 👍 0    🔁 0    💬 0    📌 0
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while #coding with #R and playing with #GitHub, this is one big satisfactions when it appears on the top of README 🚀

13.12.2025 15:12 — 👍 0    🔁 0    💬 0    📌 0
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when you code over weekend and results are f*ck*ng awesome!!

#R #claude #perplexity
#TrEMBLE #uniprot #proteomes #taxonomic_divisions #fungi

08.12.2025 23:34 — 👍 2    🔁 0    💬 0    📌 0
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Professor Maarja Öpik valiti mullateaduse valdkonna akadeemikuks Eesti teaduste akadeemia valis 3. detsembril mullateaduse valdkonna akadeemikuks Tartu Ülikooli ökoloogia ja maateaduste instituudi direktor ja molekulaarse ökoloogia professor Maarja Öpik.

Congratulations to New Phytologist's Editor-in-Chief, Maarja Öpik, on being elected to the Estonian Academy of Sciences!

omi.ut.ee/et/uudis/pro...

05.12.2025 10:27 — 👍 16    🔁 2    💬 0    📌 0
PhD Scholarships in Agricultural Robots and Software for Sustainable Farming Imagine a world where food production is in harmony with natural processes, farmers nurture healthy soils, and biodiversity thrives. In contrast, current monoculture farming systems undermine this…

📢PhD Scholarships in Agricultural Robots and Software for Sustainable Farming at University of Southern Denmark
The application deadline is December 8, 2025
fa-eosd-saasfaprod1.fa.ocs.oraclecloud.com/hcmUI/Candid... #PlantSciJobs #DigitalTwins

04.12.2025 16:10 — 👍 2    🔁 1    💬 1    📌 0
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🧪 Submit your abstract for #EESSymbiosis and get the chance to present your research, receive qualified feedback and help develop our understanding of the complexities of symbiotic function.

You have until 25 Nov: https://s.embl.org/ees26-03-bl

🗓️ 17 – 20 Mar 2026
📍 EMBL Heidelberg and Virtual

18.11.2025 10:05 — 👍 10    🔁 4    💬 0    📌 1
Graphics providing the following information: "Webinar at EMBL-EBI. From bench to database: the journey of a UniProt entry. 11 December 2025, 15:00-16:00 GMT. Speaker: Michele Magrane, EMBL-EBI". A photo of the speaker is provided close to the name.

Graphics providing the following information: "Webinar at EMBL-EBI. From bench to database: the journey of a UniProt entry. 11 December 2025, 15:00-16:00 GMT. Speaker: Michele Magrane, EMBL-EBI". A photo of the speaker is provided close to the name.

Join us for our upcoming webinar next week, where we will trace the journey of protein data from the lab bench and scientific literature into the UniProt Knowledgebase.

Registration is free but essential:
www.ebi.ac.uk/training/eve...

🖥️🧬

02.12.2025 10:51 — 👍 4    🔁 4    💬 0    📌 0
Hand-drawn botanical illustration of red-capped mushrooms labeled Amanitopsis pulchella, with additional dried mushroom specimens and handwritten notes on a beige paper background.

Hand-drawn botanical illustration of red-capped mushrooms labeled Amanitopsis pulchella, with additional dried mushroom specimens and handwritten notes on a beige paper background.

Ever seen fungal illustrations? 🍄 Our Fungarium Sequencing Project Team is thrilled to show some of the original illustrations that were created when the species were first described as new to science. In some cases, this is the only visual reference material of the original fungus that we have! 🧵👇

02.12.2025 11:07 — 👍 43    🔁 13    💬 1    📌 1
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⏰Don't miss this chance to showcase your research and chat with an incredible group of soil experts!

Late-breaking poster submissions for #GSBC2026 are due on January 30, 2026!

Submit your abstract here: globalsoilbiodiversity2026.org/abstract/

01.12.2025 19:29 — 👍 7    🔁 9    💬 0    📌 0
Ten simple rules for defining a computational biology project

💎Hidden jewel from the past

📖Checkout this article I found at PLOS: dx.plos.org/10.1371/jour...

#CompBio​
#ComputationalBiology​
#Bioinformatics​
#ResearchDesign​
#ProjectPlanning​
#ReproducibleResearch​
#TenSimpleRules​
#PhDLife​
#AcademicWriting

01.12.2025 14:44 — 👍 0    🔁 0    💬 0    📌 0
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A Quick Guide to Organizing Computational Biology Projects

💎Hidden jewel from the past

Checkout this article I found at PLOS: dx.plos.org/10.1371/jour...

#CompBio​
#ComputationalBiology​
#Bioinformatics​
#ResearchWorkflow​
#DataManagement​
#Reproducibility​
#VersionControl​
#ElectronicLabNotebook​
#BestPractices

01.12.2025 14:41 — 👍 1    🔁 0    💬 0    📌 0
Soil-dwelling microarthropods and fungi: combined indicators of ecosystem health in mediterranean agroforestry systems

🚀New study on #soil #fungi🍄 & #microarthropods🪳 as #bioindicators in Mediterranean agroforestry
🌱 Diversity shifts with grazing intensity revealed.
Tool for sustainable land & climate resilience.
📖Read more: rdcu.be/eQUO7

#Agroforestry #SoilHealth #Biodiversity #Sustainability
#CNR-IPSP #CNR-IBE

20.11.2025 15:04 — 👍 3    🔁 2    💬 0    📌 0
Genomic traits associated with pathogenicity.

Genomic traits associated with pathogenicity.

Lifestyles shape genome size and gene content in fungal pathogens.
buff.ly/tec1Tds

12.11.2025 23:28 — 👍 8    🔁 3    💬 1    📌 1
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Warm greetings from #Turin!
#ATP #NittoFinals #Tennis

13.11.2025 10:13 — 👍 0    🔁 0    💬 0    📌 0
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Ignoring non‐English‐language studies may bias ecological meta‐analyses Ignoring non-English-language literature may bias outcomes of ecological meta-analyses, due to systematic differences in effect sizes between studies published in English and non-English languages.

Ignoring non-English-language studies may bias ecological meta-analyses. onlinelibrary.wiley.com/doi/full/10....

04.11.2025 09:40 — 👍 8    🔁 2    💬 0    📌 0
https://www.mdpi.com/3572660

https://www.mdpi.com/3572660

Worried if your research is reproducible? You should be!

Our new editorial in Horticulturae shares tips for transparent methods, detailed protocols, and reproducible workflows using R/Python—not Excel!

🚀Read it here: www.mdpi.com/3572660

#reproducibility #openscience #datarigour #scicommunity

03.11.2025 11:02 — 👍 0    🔁 0    💬 0    📌 0
Redirecting

🚀 New paper out!
doi.org/10.1016/j.ij...
Thanks to the #teamwork between #CNR #IPSP (plant & soil biology) and #STIIMA (textile engineering), we’ve shown how #chitosan and #natural_dyes influence #cotton fabric #biodegradation in compost-rich #soil.🌱🧪

#GreenScience #Collaboration #Biomaterials

03.06.2025 13:02 — 👍 0    🔁 0    💬 0    📌 0
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It's time for some #Crocus vernus blowing!
#crocus #flowers #floweringcrocus #gardening #spring

10.03.2025 08:41 — 👍 1    🔁 0    💬 0    📌 0
Fertilization regulates maize nutrient use efficiency through soil rhizosphere biological network and root transcriptome | Plant-Microbe Symbiosis Fertilization impacts soil biological communities, affecting their diversity, structure, and composition. These communities are crucial in rhizosphere microenvironment, influencing root genes expressi...

www.scoop.it/topic/plant-...

10.03.2025 01:06 — 👍 6    🔁 3    💬 0    📌 0
iFAST, Wim van der Putten

"Aboveground-belowground #interactions in a warming world: consequences for memories of the #soil #biodiversity" by Prof. Wim van der Putten, Netherlands Institute of Ecology (Oct 18, 2023), and older but interesting seminar from #iFAST.

#symbiosky

ieg4.rccc.ou.edu/seminar/vide...

21.02.2025 09:03 — 👍 0    🔁 0    💬 0    📌 0

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