Abhinav Sur's Avatar

Abhinav Sur

@abhinavsur.bsky.social

K99/R00 postdoc studying intestinal cell fate and differentiation during zebrafish embryogenesis ~ sc-multiomics, genetics | ex-annelid biologist Daniocell: https://daniocell.nichd.nih.gov/

134 Followers  |  50 Following  |  8 Posts  |  Joined: 07.12.2023  |  1.9942

Latest posts by abhinavsur.bsky.social on Bluesky

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Check out our recent preprint, "Live longitudinal imaging of meningeal cerebrovascular injury and its sequelae in adult zebrafish."

lnkd.in/gN7z6th4

18.11.2025 02:42 โ€” ๐Ÿ‘ 36    ๐Ÿ” 14    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 3

Yaaay! Great to have you back!

31.10.2025 19:57 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

If youโ€™re interested in joining our new lab at @uarizona.bsky.social as a #labmanager, please send a CV and brief cover letter to surabhinav@arizona.edu. Experience with zebrafish husbandry is a must, and experience in molecular biology or microscopy is a plus. You get to set the rules!
#zebrafish

26.10.2025 00:41 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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I am delighted to announce that I will be starting as an Assistant Professor at the University of Arizona in Spring 2026. Our lab will study intestinal best4+ cells in zebrafish. We are seeking a lab manager with previous zebrafish experience โ€“ come build with us.
surlab-gastro.my.canva.site

26.10.2025 00:41 โ€” ๐Ÿ‘ 23    ๐Ÿ” 4    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 0

Ok, friends! If youโ€™re a Daniocell user, itโ€™s now available again outside of the NIH. Very sorry for any inconvenience this posed for any of you and thanks for your patience. Weโ€™re taking additional steps to hopefully prevent similar outages in the future. Happy surfing ๐ŸŽฃ

30.07.2025 23:44 โ€” ๐Ÿ‘ 25    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Transitions in development โ€“ an interview with Jeffrey Farrell

@jeffreyafarrell.bsky.social talks about becoming a group leader, his insights on advocacy for developmental biology and his belief in unifying single-cell biology with classical approaches.

journals.biologists.com/dev/article/...

28.07.2025 16:06 โ€” ๐Ÿ‘ 60    ๐Ÿ” 19    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Iโ€™m doing fine, hope to catch up with you next week at IZFC

04.07.2025 16:29 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Big congratulations Kristen!!! This is such wonderful news.

04.07.2025 04:13 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

For more customized analysis using our zebrafish timecourse dataset available in Daniocell, check out this amazing resource DaniocellDesktop. Extremely happy to see this brainchild of @jeffreyafarrell.bsky.social out in the wild.

14.06.2025 00:56 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Spiralia enthusiasts!! ๐Ÿš๐Ÿ™๐ŸŒ๐Ÿ’›
Our amazing speaker for the Spiralia Satellite symposia at the #PASEDB2025

Nรฉva Meyer, Associate Professor, Clark University

Organizers: Christina Zakas and @albertinlab.bsky.social

#evodevo #pasedb #spiralia

12.06.2025 14:07 โ€” ๐Ÿ‘ 5    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Jeff Farrell about to start his seminar

Jeff Farrell about to start his seminar

5 people at dinner

5 people at dinner

It was so awesome to have @jeffreyafarrell.bsky.social here to give a departmental seminar today!!

21.05.2025 04:41 โ€” ๐Ÿ‘ 24    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Timeline of important technological developments in zebrafish research.

Timeline of important technological developments in zebrafish research.

With a published genome & advancements in gene editing, the field of #zebrafish genetics has exploded in recent decades. We take a look back at major achievements in this infographic. For more, read this book chapter by @varshneylab.social et al (2015)($) doi.org/10.1016/bs.a... #ZebrafishFunFacts ๐Ÿงช

10.05.2025 09:23 โ€” ๐Ÿ‘ 20    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2
Organ regeneration in the zebrafish. Summary of some of the organs and tissues used for regeneration studies in zebrafish. Preferred injury models are annotated for each organ. Image and text credit to Marques et al. (2019) https://doi.org/10.1242/dev.167692

Organ regeneration in the zebrafish. Summary of some of the organs and tissues used for regeneration studies in zebrafish. Preferred injury models are annotated for each organ. Image and text credit to Marques et al. (2019) https://doi.org/10.1242/dev.167692

Masters of regeneration? #Zebrafish are capable of regenerating their fins, spinal cord, pancreas, skin, retina, heart, liver, brain, tendons, hair cells, & kidney. For more info on this amazing species, read this primer on regeneration: journals.biologists.com/dev/article/... #ZebrafishFunFacts ๐Ÿงช

10.05.2025 08:14 โ€” ๐Ÿ‘ 30    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2
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I thought this was an interesting interaction! This Polychaete larva (possibly Spionidae?) has somehow got inside the tube of a Lanice sp. (sand mason worm) larva! The tube resident doesnโ€™t seem too fussed about the visitor though. ๐Ÿฆ‘ #plankton

10.05.2025 07:57 โ€” ๐Ÿ‘ 47    ๐Ÿ” 8    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 0

Many congratulations Miranda!

25.04.2025 15:08 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Congratulations!!

23.04.2025 14:40 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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An optogenetic toolkit for robust activation of FGF, BMP, and Nodal signaling in zebrafish Cell signaling regulates a wide range of biological processes including development, homeostasis, and disease. Accessible technologies to precisely manipulate signaling have important applications in ...

Happy to share a new preprint from my lab! We characterize the on/off kinetics, light dosage-dependence, and more for a suite of optogenetic signaling activators in zebrafish embryos ๐Ÿ’ก www.biorxiv.org/content/10.1...

21.04.2025 13:47 โ€” ๐Ÿ‘ 105    ๐Ÿ” 36    ๐Ÿ’ฌ 9    ๐Ÿ“Œ 4

โ€œThese findings support the use of zebrafish as a useful comparative model for studying the meninges, provide a foundational description for future zebrafish meningeal researchโ€

New work from @biomarina-vg.bsky.social & Weinstein Lab at NIH ๐ŸŸ

16.04.2025 16:35 โ€” ๐Ÿ‘ 11    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Great new work led by @biomarina-vg.bsky.social on zebrafish meninges!

Particularly ๐Ÿคฉ is the descriptions of ependymin-expressing meningeal cells (not a fibroblast!) & ablation studies showing their essential role in viability. So much more to learn!

Congrats Marina & team on this great work! ๐Ÿฆ“๐ŸŸ๐Ÿง 

20.04.2025 14:40 โ€” ๐Ÿ‘ 40    ๐Ÿ” 11    ๐Ÿ’ฌ 6    ๐Ÿ“Œ 0
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๐Ÿซ€ Zebrafish protein unlocks dormant genes for mammalian heart repair.

Our work published by @springer1842.bsky.social in Nature CVR uncovers how the protein HMGA1 could unlock mammalian heart repair.

rdcu.be/d5owa

#HeartHealth #Regeneration #Biomedicine #Cardiology

03.01.2025 09:56 โ€” ๐Ÿ‘ 45    ๐Ÿ” 13    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 4
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Closing out the year, @cbellegarda.bsky.social and @franziau.bsky.social argue that zebrafish have much to teach us about diversity. Well, diversity among motor neurons that move the eyes, anyway ๐Ÿ‘€.
Plus read our opinionated takes on current articles too! authors.elsevier.com/a/1kL%7Eb3Q9...

30.12.2024 12:47 โ€” ๐Ÿ‘ 44    ๐Ÿ” 12    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Figure 5 (A) Top: Mid-sagittal sections of control embryos at 14, 16 and 21โ€…hpf. Skeletogenic cells are labeled green by the hybridization chain reaction (HCR) targeting msp-130, blastocoelar cells labeled yellow with HCR targeting astacin4, and pigment cells labeled red with HCR targeting pks1. Bottom: Micromereless embryos at the same three time points and stained with the same HCR probes.

Figure 5 (A) Top: Mid-sagittal sections of control embryos at 14, 16 and 21โ€…hpf. Skeletogenic cells are labeled green by the hybridization chain reaction (HCR) targeting msp-130, blastocoelar cells labeled yellow with HCR targeting astacin4, and pigment cells labeled red with HCR targeting pks1. Bottom: Micromereless embryos at the same three time points and stained with the same HCR probes.

Signal timing determines transfating outcomes

Read this Research Highlight showcasing work from Alejandro Berrio, David McClay @duke-university.bsky.social and colleagues:
journals.biologists.com/dev/article/...

30.12.2024 13:15 โ€” ๐Ÿ‘ 17    ๐Ÿ” 4    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Graphical abstract of the study

Graphical abstract of the study

Out now in Dev Cell! scRNAseq trajectories describe the cascade of gene expression as cells differentiate, but turning them into a clear understanding of the underlying biology of a cell type's development remains challenging. authors.elsevier.com/c/1k9qj5Sx5g... (1/)

26.11.2024 15:49 โ€” ๐Ÿ‘ 160    ๐Ÿ” 50    ๐Ÿ’ฌ 14    ๐Ÿ“Œ 3

@abhinavsur is following 20 prominent accounts