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Matthew Collins

@matthewcollins.bsky.social

Archaeology, University of Cambridge | The Globe, University of Copenhagen Ancient Proteins | Medieval Manuscripts | Proteomics and AI | πŸ‡ΊπŸ‡¦

4,216 Followers  |  4,973 Following  |  531 Posts  |  Joined: 22.09.2023  |  2.2746

Latest posts by matthewcollins.bsky.social on Bluesky

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Paleoproteomics in Atapuerca - DiΓ‘logos Sapiens - Sapiens Dialogues - Podcast on iVoox Listen and download DiΓ‘logos Sapiens - Sapiens Dialogues episodes for free. 22nd episode of Sapiens Dialogues. This is the fourth dialogue of the fourth season. The paleoproteomics specialist Prof. Ma...

I had the opportunity to interview @matthewcollins.bsky.social on his recent visit to @cenieh.bsky.social. The podcast is out now! It's a fun chat about #palaeoproteomics and the ways we can study ancient #proteins at Atapuerca! Thanks Matthew for the chat! www.ivoox.com/en/paleoprot...

01.08.2025 12:48 β€” πŸ‘ 19    πŸ” 7    πŸ’¬ 0    πŸ“Œ 0

I am starting a computational lab at LIOS, Riga, Latvia, and going to recruit a few people. Please DM if you are interested in a postdoc or PhD position in my Metabolic Research Group within the TARGETWISE project. I can highly recommend Riga, it is a beautiful city with very good living conditions.

18.07.2025 09:03 β€” πŸ‘ 35    πŸ” 30    πŸ’¬ 0    πŸ“Œ 7

And still probably the proceedings will go through our free and transparent peer review system!

13.07.2025 06:47 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

Wonderful time with @cenieh.bsky.social looking at the sites @fatapuerca.bsky.social !

09.07.2025 12:53 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Curious about archaeology? Ask us anything on #AskAnArchaeologist Day, July 25! Join on Instagram, X, Reddit & more. No question too silly!

Catch Dan, one of our #FestivalOfArchaeology 2024 stars, as he grills Claire with some awesome and curious questions!

03.07.2025 16:47 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Stone Age farmers’ households passed from mother to daughter Moms and daughters were at the center of the family in ancient Γ‡atalhΓΆyΓΌk, ancient DNA and archaeological evidence suggest

The nature of Neolithic society is one of the most debated topics in archaeology–a debate that's almost impossible to settle w/ conventional methods alone. Now, new DNA data from a site in Turkey called Γ‡atalhΓΆyΓΌk points to a significant role for women: www.science.org/content/arti... @science.org

26.06.2025 19:41 β€” πŸ‘ 145    πŸ” 42    πŸ’¬ 3    πŸ“Œ 6
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On 25 June 1997, pyroclastic flows from a sudden dome collapse at Soufrière Hills devastated several villages. 19 lives were lost, and 5 others severely injured. We remember them today and reflect on the impact of this tragic event in our shared history. #Montserrat #SHV30

25.06.2025 15:12 β€” πŸ‘ 8    πŸ” 4    πŸ’¬ 0    πŸ“Œ 1

Where is the 3rd recommendation... no link.. Mysterious? πŸ”

25.06.2025 11:48 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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PhD – Archaeology and Art History, Naples Federico II | HigherJobz Apply for a fully funded PhD in Archaeology and Art History at the University of Naples Federico II. Global applicants welcome. Deadline: 7 July 2025.

PhD in Archaeology and Art History – University of Naples Federico II, Italy
Funded doctoral in heritage, archaeology, and art history.
Eligibility: Master’s
Deadline: 7 July 2025
Details: higherjobz.com/phd-archaeol...
#PhDJobs #AcademicJobs #Italy #Humanities #DigitalHumanities #HigherJobz

22.06.2025 10:15 β€” πŸ‘ 5    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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[ASAP] Simultaneous Taxonomic and Sex Identification of Bos and Bison Teeth Using Low-Invasive High-Resolution Mass Spectrometry Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.5c00219

(J Proteom Res) [ASAP] Simultaneous Taxonomic and Sex Identification of Bos and Bison Teeth Using Low-Invasive High-Resolution Mass Spectrometry: Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.5c00219 #MassSpecRSS

21.06.2025 18:14 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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The Hunt for Proteins in Dinosaur Fossils Reports of peptide sequences in 2005 have ignited controversy and interest in paleoproteomics.

Carolyn Wilke: The hunt for proteins in dinosaur fossils. ACS Cent. Sci. (2025) pubs.acs.org/doi/full/10....

20.06.2025 16:01 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

6️⃣/ After three decades in this field, I appreciate Schweitzer's approach of trying to disprove rather than prove hypotheses. The systematic search for biomolecules her work sparked has revolutionised #palaeoproteomics, regardless of the T. rex verdict. Science marches on! πŸ¦•

20.06.2025 15:59 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

5️⃣/ Taylor's new Edmontosaurus sequences are independent replication, but their tryptic peptides seem too clean cut , not the ladders with "ragged ends" I would expect from ancient proteins. This pattern resembles fresh samples, raising contamination concerns despite careful controls.

20.06.2025 15:59 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

4️⃣/ Cross-linking chemistry may be key - @jwiemann.bsky.social's "chocolate colour gradient" approach uses visual cues to identify promising fossils. Iron-mediated reactions could create stable protein networks resistant to degradation.

20.06.2025 15:59 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

3️⃣/ However, @carlipeters.bsky.social's #ZooMS work in 30Β°C Australian caves found 70,000-year-old collagen from extinct fauna. This challenges our models and suggests preservation mechanisms we don't fully understand. Environmental factors clearly matter more than temperature alone.

20.06.2025 15:59 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

2️⃣/ The core issue: can collagen survive 68 million years? Our (Colin Smith's) old temperature-degradation models suggest not - fossils above 20Β°C shouldn't yield detectable collagen after 15,000 years. Yet Hell Creek formation temperatures were much warmer historically. 🌑️

20.06.2025 15:59 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

1️⃣/ Fascinating new piece in @cenmag.bsky.social on the hunt for dinosaur proteins! The 2005 Schweitzer T. rex collagen reports remain contentious after 20 years. Recent Edmontosaurus data adds fuel to the debate, but I cofess I remains cautiously sceptical. #palaeoproteomics

20.06.2025 15:59 β€” πŸ‘ 14    πŸ” 2    πŸ’¬ 3    πŸ“Œ 1

6️⃣/ After three decades in #palaeoproteomics, it's inspiring to see how platforms like Bordeaux are pushing boundaries whilst maintaining rigorous scientific standards. Caroline's work ensures these powerful tools serve both scholarship and heritage preservation. Chapeau! 🎩

20.06.2025 10:42 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

5️⃣/ The @univbordeaux.bsky.social team's collaborative ethos shines through - working with museums, conservators, and researchers worldwide. This symposium itself demonstrates Caroline's vision of making advanced analytical techniques accessible across disciplines. #heritage #archaeology

20.06.2025 10:42 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

4️⃣/ Caroline's work exemplifies why @univbordeaux.bsky.social has become such a pivotal centre for heritage science. The platform's ability to bridge analytical rigour with cultural interpretation sets the standard for the field. Brilliant presentation! #archaeology #palaeoproteomics

20.06.2025 10:42 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

3️⃣/ The "effect of treatment" aspect is particularly crucial for conservators - knowing how previous interventions have altered artworks helps inform future preservation strategies. #massspec provides that temporal roadmap through chemical fingerprints.

20.06.2025 10:42 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

2️⃣/ Love how Caroline emphasises the holistic approach: it's not just about identifying materials, but understanding modifications, tracking changes over time, and revealing the human stories behind cultural objects. This is analytical chemistry at its most humanistic.

20.06.2025 10:42 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Caroline in a patterned dress presents to an audience in a tiered lecture theatre with curved wooden seating. The projection screen shows a colorful diagram with molecular structures and text about "MATERIALS (ID, Modification)" including bullet points about understanding artist intention, artwork changes, treatment effects, and societal context. Attendees sit on wooden benches taking notes, with laptops open throughout the amphitheatre.

Caroline in a patterned dress presents to an audience in a tiered lecture theatre with curved wooden seating. The projection screen shows a colorful diagram with molecular structures and text about "MATERIALS (ID, Modification)" including bullet points about understanding artist intention, artwork changes, treatment effects, and societal context. Attendees sit on wooden benches taking notes, with laptops open throughout the amphitheatre.

🧡 Thread: 1️⃣/ Caroline Tokarski delivering a masterclass on how #massspec revolutionises our understanding of cultural materials! Her slide perfectly encapsulates the multifaceted insights we can extract - from artist intention to societal context. #teammasspec #heritage

20.06.2025 10:42 β€” πŸ‘ 15    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0

A packed amphitheatre lecture hall with curved wooden tiered seating filled with attendees listening to a presentation. The projection screen displays a split image comparing modern mass spectrometry equipment on the left with Rembrandt's famous 1632 painting "The Anatomy Lesson of Dr. Nicolaes Tulp" on the right, branded with "RIJKS MUSEUM". The historic venue features elegant wooden architecture with multiple levels of curved benches rising steeply upward.

A packed amphitheatre lecture hall with curved wooden tiered seating filled with attendees listening to a presentation. The projection screen displays a split image comparing modern mass spectrometry equipment on the left with Rembrandt's famous 1632 painting "The Anatomy Lesson of Dr. Nicolaes Tulp" on the right, branded with "RIJKS MUSEUM". The historic venue features elegant wooden architecture with multiple levels of curved benches rising steeply upward.

Alba Alvarez Martin from @rijksmuseum.bsky.social
presenting "Making Mass Spectrometry Accessible in Cultural Institutions".

The historical irony isn't lost as Rembrandt's anatomy lesson is juxtaposed with #teammasspec in an amphitheatre designed for anatomical dissection.

20.06.2025 10:32 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Bird's eye view of a circular lecture theatre with curved wooden tiered seating arranged in concentric arcs. At the bottom, a projection screen displays "Advanced mass spectrometry applied to cultural heritage Symposium" with University of Bordeaux branding. Two people stand near the presentation area at the front, with wooden chairs and desks arranged in the curved amphitheatre design typical of academic venues.

Bird's eye view of a circular lecture theatre with curved wooden tiered seating arranged in concentric arcs. At the bottom, a projection screen displays "Advanced mass spectrometry applied to cultural heritage Symposium" with University of Bordeaux branding. Two people stand near the presentation area at the front, with wooden chairs and desks arranged in the curved amphitheatre design typical of academic venues.

A woman with glasses and light blue striped shirt sits at a curved wooden desk in a tiered lecture theatre. The amphitheatre features multiple levels of curved wooden benches rising upward, with another person visible in the distant upper seating. The architectural design shows elegant curved lines and wood paneling throughout the academic venue.

A woman with glasses and light blue striped shirt sits at a curved wooden desk in a tiered lecture theatre. The amphitheatre features multiple levels of curved wooden benches rising upward, with another person visible in the distant upper seating. The architectural design shows elegant curved lines and wood paneling throughout the academic venue.

Alternative perspectives at the "Advanced Mass Spectrometry in Cultural Heritage" symposium in Bordeaux!

www.u-bordeaux.fr/evenements/s...
The 3rd of these essential gathering brings together experts from across the globe to explore cutting-edge applications in heritage science. #teammasspec

20.06.2025 10:10 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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β€˜Dragon Man’ skull may be the first from an enigmatic human cousin Ancient proteins and DNA may peg a 146,000-year-old Chinese skull as the most complete fossil to date from Denisovans, a puzzling line of Asian hominids.

β€˜Dragon Man’ skull may be the first from an enigmatic human cousin [our ongoing phylogenetic analyses suggest Denisovan fossils are part of the Homo longi clade]
www.sciencenews.org/article/skul...

18.06.2025 15:10 β€” πŸ‘ 50    πŸ” 11    πŸ’¬ 1    πŸ“Œ 0
A lecture theatre with a female professor explaining the outline of the course.

A lecture theatre with a female professor explaining the outline of the course.

Caroline Tokarski kicks off the 2025 Bordeaux Proteomics Summer School: Advanced Mass Spectrometry Applied ro Cultural Heritage.

So happy to be here and really looking forward to this!

16.06.2025 07:24 β€” πŸ‘ 10    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

We are working on an AI based metadata extraction pipeline from papers, supplementary files and mass spectra. Come to @harirmds.bsky.social's talk at #EuPA2025 for the newest and hottest results!

13.06.2025 21:47 β€” πŸ‘ 10    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Cleaning the dead: Optimized decontamination enhances palaeoproteomic analyses of a Pleistocene hominin tooth from Khudji, Tajikistan The study of ancient proteins preserved in a range of archaeological, cultural heritage, and palaeontological materials is increasingly contributing t…

Cleaning the dead: Optimized decontamination enhances palaeoproteomic analyses of a Pleistocene hominin tooth from Khudji, Tajikistan www.sciencedirect.com/science/arti...

09.06.2025 20:24 β€” πŸ‘ 12    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
Figure 2 of the manuscript. Data availability in palaeoproteomics. A) Percentage of ZooMS and shotgun palaeoproteomics studies with available datasets. Preprints and papers that did not produce any data were excluded from this calculation. B) Number of palaeoproteomics datasets in online repositories (since 2010). Β΄OtherΒ΄ repositories include Dryad, Figshare, Github, Mendeley Data, and the OSF Framework. The dataset was compiled by manually going through the list of publications compiled for Figure 1 and checking raw data availability. This figure was made in R v.4.4.2. with R Studio v.2024.12.0+ (R Core Team, 2023) using ggplot2 (Wickham, 2016).

Figure 2 of the manuscript. Data availability in palaeoproteomics. A) Percentage of ZooMS and shotgun palaeoproteomics studies with available datasets. Preprints and papers that did not produce any data were excluded from this calculation. B) Number of palaeoproteomics datasets in online repositories (since 2010). Β΄OtherΒ΄ repositories include Dryad, Figshare, Github, Mendeley Data, and the OSF Framework. The dataset was compiled by manually going through the list of publications compiled for Figure 1 and checking raw data availability. This figure was made in R v.4.4.2. with R Studio v.2024.12.0+ (R Core Team, 2023) using ggplot2 (Wickham, 2016).

1/5 New recommendation: Dekker et al. & @zandraselina.bsky.social‬ (2025) Open science, communication, and collaboration for the future of palaeoproteomics. V4 recommended by @PCI_Archaeology doi.org/10.5281/zeno.... #Archaeology #opendata #openscience @paastacommunity.bsky.social‬ #Palaeoproteomics

07.06.2025 16:15 β€” πŸ‘ 19    πŸ” 7    πŸ’¬ 1    πŸ“Œ 2

@matthewcollins is following 19 prominent accounts