We're Looking to Sponsor Postdoc Fellows in AI-Driven Microbial Cultivation
NSF Postdoctoral Research Fellowships in Biology
We're looking to sponsor applications to the new NSF PRFB who are interested in using AI to tackle microbiology's "Great Plate Count Anomaly"
Details below. Please share.
#microsky #postdoc #AI #microbiology
open.substack.com/pub/carinila...
18.02.2026 19:21 โ ๐ 5 ๐ 3 ๐ฌ 0 ๐ 1
CARB-X is opening a new funding round soonโsign up for their newsletter (link in replies) to get the announcement.
CARB-X is one of few organizations making meaningful progress ensuring access to new antimicrobial drugs and supporting preventatives/diagnostics.
17.02.2026 16:57 โ ๐ 1 ๐ 0 ๐ฌ 1 ๐ 0
Better, forbibden!
03.02.2026 03:44 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 1
Looks interesting
03.02.2026 03:30 โ ๐ 0 ๐ 0 ๐ฌ 0 ๐ 0
Are you using the Claude agent SDK or a different platform? Any docs/guides you have found particularly helpful?
31.01.2026 19:41 โ ๐ 1 ๐ 0 ๐ฌ 2 ๐ 0
A stroller on top of a 5 foot tall mound of snow
My parking spot today
28.01.2026 18:34 โ ๐ 1 ๐ 0 ๐ฌ 0 ๐ 0
Really encourage folks who had bad impressions of earlier LLMs & hallucinations to take a look at domain-specific, agentic systems like Edison, Claude Code, etc.
Semantics aside--these things are just very useful now.
15.01.2026 16:16 โ ๐ 1 ๐ 0 ๐ฌ 0 ๐ 0
For the genomic analysis, Edison performed similarly, but "connected the dots" within the analysis in a way it is hard to imagine a PhD student doing on their own 5 years ago.
15.01.2026 16:16 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
I knew what reasonable results should be and how long it would take a human.
For the NMR task, Edison performed similarly to a senior PhD student that manually reviewed the entire spectra, and correctly identified things like negative controls without instruction.
15.01.2026 16:16 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
Tried Edison Analysis (not Kosmos) on two tasks and was blown away:
1. Uploaded 96 high-res NMR spectra of bacterial supernatants and asked for metabolite ID and quantification
2. Uploaded a bacterial genome and asked it to identify mobile genetic elements (more complex, but this is the gist)
15.01.2026 16:16 โ ๐ 1 ๐ 1 ๐ฌ 1 ๐ 0
Claude Code: A Highly Agentic Coding Assistant
Explore, build, and refine codebases with Claude Code.
Old news by now, but this is a fantastic short courseโfeels like Andrew Ngโs early coursera neural networks class. If you have not tried Claude Code, I recommend just skimming the videos to see what the chatter is about.
www.deeplearning.ai/short-course...
03.01.2026 21:18 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 0
Yes, 2g fiber per serving too
01.12.2025 20:48 โ ๐ 4 ๐ 0 ๐ฌ 1 ๐ 0
Snoopy chocolate peppermint goldfish = toddler ๐ฅ
01.12.2025 03:02 โ ๐ 2 ๐ 0 ๐ฌ 1 ๐ 0
#worldamrawarenessweek #waaw2025 | LifeArc
Antimicrobial resistance (AMR) is one of the greatest threats to public health, with the potential to reverse decades of medical progress.
Despite the severity of the problem, the pipeline for new dr...
Antimicrobial resistance (AMR) is one of the greatest threats to public health, with the potential to undo decades of medical progress.
This #WAAW2025, head to our LinkedIn to hear from world-leading experts on how we can tackle AMR and protect the future of medicine: t.ly/3Oxk1
21.11.2025 12:29 โ ๐ 4 ๐ 1 ๐ฌ 0 ๐ 0
Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection | Keystone Symposia
Join us at the Keystone Symposia on Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection, May 2026, in Breckenridge, with field leaders!
Registration is now open for @keystonesymposia.bsky.social "Beyond #Antibiotics: Emerging Strategies Combating #BacterialInfection." Deadline for scholarships and abstract selected short talks is Jan 7! Join us this May for an amazing meeting! keysym.us/KSBeyondAntibiotics26 #KSBeyondAntibiotics26
19.11.2025 17:37 โ ๐ 38 ๐ 28 ๐ฌ 1 ๐ 3
Conference summary with organizers listed (also in post) and Keynote speaker, Diane Newman.
Thank you to @joeyzacks.bsky.social @kimingeneva.bsky.social @dariavantyne.bsky.social @maribyndloss.bsky.social for organizing!
04.11.2025 15:44 โ ๐ 1 ๐ 0 ๐ฌ 0 ๐ 0
I'll be speaking at Beyond Antibiotics: Emerging Strategies for Combating Bacterial Infection @keystonesymposia.bsky.social May 4-7, 2026. Abstract and scholarship submissions are open through Jan 7. Please encourage those in your network working on novel infection prevention/treatment to submit!
04.11.2025 15:36 โ ๐ 5 ๐ 2 ๐ฌ 1 ๐ 0
Is this actually the subskeet?
28.10.2025 02:56 โ ๐ 0 ๐ 0 ๐ฌ 0 ๐ 0
YouTube video by Caroline Fox
Mental Health Journey to Wellness, Gratitude, and Purpose
Incredibly powerful story from endocrinologist Dr. Caroline Fox candidly sharing her experience w an acute mental health crisis & her long, difficult, maddening, deeply inspiring journey towards recovery - & return to work as a senior biopharma R&D leader. www.youtube.com/watch?v=YVWS...
12.10.2025 20:15 โ ๐ 3 ๐ 1 ๐ฌ 0 ๐ 0
Largely agree with thisโclinical validation of drugs is an extremely small N universe, and itโs not feasible to validate human- vs AI-generated hypothesis prob of success. AI is much better suited to solving the sub-problems in drug dev (which vanilla machine learning was already pretty good at).
20.10.2025 13:52 โ ๐ 5 ๐ 0 ๐ฌ 0 ๐ 0
What is their beef about needing to clear snow and ice off sidewalks?
Did this email have any tree-related content ๐ค
20.10.2025 01:44 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
Amazing resourceโhope it gets used broadly and we see TnSeq datasets become more common for Bacteroidales.
13.10.2025 20:43 โ ๐ 5 ๐ 1 ๐ฌ 0 ๐ 0
Fully agreedโpeptides donโt really overcome any of the policy, payment, or access issues that impede traditional anti-infective commercialization and utility. Cool to have in the armamentarium, but development $$ are mostly a zero sum game in the spaceโฆ
03.10.2025 14:12 โ ๐ 2 ๐ 0 ๐ฌ 0 ๐ 0
Unfortunately there is a 1000% bollard tariff
02.10.2025 21:54 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
No mere post can stop the F150s we so adore
02.10.2025 08:47 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
Knowing the time without a watch
02.10.2025 08:23 โ ๐ 0 ๐ 0 ๐ฌ 0 ๐ 0
So many bollards lining the sidewalk
Things I love about London: BOLLARDS
02.10.2025 07:55 โ ๐ 5 ๐ 0 ๐ฌ 3 ๐ 0
Faculty Professor Associate - Full-Time | Vaughn Cooper
We are recruiting Faculty microbiologists in three (3) different, complementary, and collaborative areas at the University of Pittsburgh associated with the School of Medicine.
1) Fundamental researc...
๐จ Microbiologists! We are recruiting Assistant / Associate Professors in 3 collaborative areas of our U. Pittsburgh School of Medicine.
1) MMG (my dept): fundamental research in med micro
2) Peds ID / I4Kids institute
3) Center for Vaccine Research
๐ to all 3 w/info: www.linkedin.com/posts/vaughn...
23.09.2025 22:31 โ ๐ 93 ๐ 126 ๐ฌ 1 ๐ 6
Metabolomics Specialist at the @ZimmermannLab.
๐Heidelberg, Germany
๐ง๐ท
Independent innovators of online NMR software -- ELEMENTS and ELECTRO
Discover more about our professionally engineered NMR spectroscopy software at https://nmronline.uk
Curating Magnetic Resonance news since 2011. use #NMRchat (New Magnetic Resonance Chat) or tag ๐งฒ for everything MR, NMR, EPR, ESR and MRI. No endorsements
Upcoming Magnetic Resonance Events in 2026 (google doc online, being populated) t.ly/4laEY
CEO of FutureHouse, building an AI Scientist
Between physics and biology - Metabolism, microbial ecosystems, origin of life
http://segrelab.bu.edu
Scientist Human Gut microbiome @MIB_WUR ๐ณ๐ฑ - @DanoneResearch ๐จ๐ต - now @RaesLab ๐ง๐ช (@VIB_microbes @KU_Leuven). Opinions are my own.
Department of Systems Biology @Columbia University VP&S
systemsbiology.columbia.edu
Assistant Professor @Columbia University | Ribosome, translation, RNA, CRISPR, genomics | alum @MIT @WhiteheadInst @Tsinghua_Uni | #hiringNow
xuebingwu.github.io
Associate prof. at UCLA
https://garud.eeb.ucla.edu
โA jovial guy from Brooklyn trying to prod society in a better direction.โ Co-host, The War on Cars podcast. Runner, Disney parks fan (he/him)
Our new book, "Life After Cars" is out from Thesis / Penguin Random House.
https://www.lifeaftercars.com
Bioinformatician & web software developer ๐ซ๐ฎ
Foundational tools for omics data (mostly in python).
A 501(c)(3) nonprofit organization that convenes open, peer-reviewed life science meetings over a wide range of fields & global locations.
https://www.keystonesymposia.org/
https://x.com/KeystoneSymp
https://www.youtube.com/KeystoneSymposia
Cambridge City Councillor. Democratic Socialist. https://linktr.ee/alzubi
Organizer, bartender, socialist, cat dad ๐ณ๏ธโ๐
Cambridge, MA freelance reporter, usually for @CambridgeDay.
MIT; public recs; data; legal news
Lately: immigration.
jhawk@alum.mit.edu
617.797.0250
Microbiology, evolution, and bacteriophages. University of Pittsburgh School of Medicine.
Professor, University of Geneva. We study Enterococcal biofilms, pathogenesis, and AMR. Formerly @KimInSingapore ๐ด.
https://kimberlyklinelab.com/
Assistant Professor in Computational Metabolomics. Fascinated by the diverse chemistry of nature. Strives for Community-based solutions and Open Science.