I wrote a new tutorial on competitive metagenomic read recruitment (and profiling of the results with #anvio), for those of us nerds who would like to get their hands dirty with data:
anvio.org/tutorials/co...
@emvidal.bsky.social
Postdoc at the Marine Biological Laboratory, Ruff Lab. Studying microbes in deep ecosystems 🧬🔬🧪
I wrote a new tutorial on competitive metagenomic read recruitment (and profiling of the results with #anvio), for those of us nerds who would like to get their hands dirty with data:
anvio.org/tutorials/co...
Looking for a cutting-edge and fun conference in 2026?
How about:
GRC Geobiology in Ventura, CA - January 11-16, 2026
www.grc.org/geobiology-c...
AbSciCon in Madison, WI - May 17-22, 2026
www.agu.org/abscicon
🤩The Ruff Lab will be there with sessions and presentations on Dark Oxygen Production 🥳
⚫ La célèbre primatologue britannique Jane Goodall, "ambassadrice" des chimpanzés et fervente défenseure de la cause environnementale est morte à l'âge de 91 ans, a annoncé mercredi son institut.
01.10.2025 18:38 — 👍 500 🔁 217 💬 15 📌 55This surprisingly relaxing footage is from SIX MILES under the ocean – and it’s the deepest ecosystem yet discovered
31.07.2025 15:38 — 👍 14287 🔁 3445 💬 434 📌 529Ten simple rules for faculty members building just and equitable environments in academic science journals.plos.org/ploscompbiol... #jcampubs
08.07.2025 13:25 — 👍 14 🔁 8 💬 0 📌 0Pretty little babies 🥰😍
The pearl octopus (Muusoctopus robustus) mates and nests in deep-sea thermal springs, where the warm water seeping from the seafloor accelerates the development of their embryos.
Learn more: www.mbari.org/animal/pearl...
Real time monitoring of hydrogenotrophic methanogenesis under deep saline aquifers conditions https://www.biorxiv.org/content/10.1101/2025.05.05.652176v1
10.05.2025 03:46 — 👍 2 🔁 1 💬 0 📌 1Microbes can use various energy and carbon sources, allowing them to colonise even the most extreme habitats on Earth. 🦠
@emvidal.bsky.social and @laurashwab.bsky.social discuss dark oxygen production in apparently anoxic environments on this #FEMSmicroBlog. #FascinatingMicrobes
I am very happy (and anxious) to share with you our most recent work in which we evaluated four of the most popular long-read assemblers,
www.biorxiv.org/content/10.1...
and tell you just a little bit about it in the following 🧵
#Nautile40 🤿
40 ans dans les abysses avec notre mythique sous-marin jaune !
www.ifremer.fr/fr/Nautile40...
Part of our team (@jordonhemingway.bsky.social, C. Fernandes, T. Nagakura, Z. Wang) went sampling in the #Bedretto tunnel this week, looking for #darkoxygen !
Thank you @isme-microbes.bsky.social for funding my participation in this expedition!
@ethzurich.bsky.social @mblscience.bsky.social
A pleasure to organize this symposium with my fellow postdoc organizers Beverly Naigles, Nancy Yang and Nicole Dames! And of course thank you to the MBL community for making it such a sucessful event 😊🧪
13.03.2025 01:44 — 👍 5 🔁 0 💬 0 📌 0I had such a great time learning #anvio last week ! Thank you @floriantrigodet.bsky.social, Iva Veseli and @merenbey.bsky.social for putting together this workshop 😊
10.03.2025 17:06 — 👍 3 🔁 0 💬 0 📌 0List of Stand Up for Science events—official events in red, solidarity events in blue.
SO MANY STAND UP FOR SCIENCE EVENTS TO CHOOSE FROM—153 and COUNTING!
To get more information on our local events and to register your own, head to www.standupforscience2025.org/local-event-information/ ☀️⬇️🌎
Today marks the 10th anniversary of the International Day of Women and Girls in Science (#IDWGS)! 👩🔬 🔬 🌍 #WomenInScience
Now more the ever, we value the importance of raising the profile of women and girls engaging with and contributing to science.
www.mbl.edu/news/renewed...
Nice article about our course and all eyes on
@jadenhansen.bsky.social sequencing microbial DNA using @nanoporetech.com Thanks also @emvidal.bsky.social, Hannah Vanderscheuren and Eleanor Greene for making this happen.