Coming March 17, 2026!
Just got my advance copy of Emergence β a memoir about growing up in group homes and somehow ending up in neuroscience and AI. Itβs personal, itβs scientific, and itβs been a wild thing to write. Grateful and excited to share it soon.
04.08.2025 16:21 β π 175 π 36 π¬ 7 π 0
βTop-down and bottom-up neuroscience: overcoming the clash of research culturesβ
doi.org/10.1038/s415...
Small contribution in this piece by @frosas.bsky.social and colleagues on how we need both types of research culture in neuroscience.
#neuroskyence
22.07.2025 15:59 β π 64 π 21 π¬ 0 π 1
"No animal prior to the advent of modern neuroscience has ever seen repeating sequences of images."
Wonderfully pithy observation @georgkeller.bsky.social love it.
15.07.2025 09:04 β π 25 π 2 π¬ 0 π 1
Our work, out at Cell, shows that the brainβs dopamine signals teach each individual a unique learning trajectory. Collaborative experiment-theory effort, led by Sam Liebana in the lab. The first experiment my lab started just shy of 6y ago & v excited to see it out: www.cell.com/cell/fulltex...
11.06.2025 15:17 β π 207 π 71 π¬ 8 π 2
22.05.2025 22:55 β π 340 π 84 π¬ 4 π 7
Basic pain research βis not workingβ: Q&A with Steven Prescott and StΓ©phanie RattΓ©
Prescott and RattΓ© critique the clinical relevance of preclinical studies in the field and highlight areas for improvement.
Basic pain researchers Steven Prescott and StΓ©phanie RattΓ© critique the clinical relevance of preclinical studies in the field and highlight areas for improvement.
By @sydneywyatt.bsky.social
#neuroskyence
www.thetransmitter.org/pain/basic-p...
18.04.2025 14:54 β π 23 π 4 π¬ 1 π 3
Natural Neuroscience
Natural neuroscience departs from the classical reductionist approach, which emphasizes control at the expense of natural behaviors, by proposing a shift tow...
I highly recommend this inspiring new book by Nahum Ulanovsky! A plea for neuroscientists to embrace βNatural Neuroscienceβ: use emerging technologies to uncover meaningful behavior and neural representations in free-roaming animals exposed to real-world stimuli.
mitpress.mit.edu/978026204499...
15.04.2025 10:28 β π 79 π 24 π¬ 3 π 1
The proximate mechanisms responsible for triggering mammalian fever are relatively
well understood. When immune cells recognize the presence of a pathogen,
they release signaling chemicals known as cytokines. Among many other functions,
cytokine signals stimulate the brain region known as the hypothalamus, which is
responsible for regulating many of the bodyβs physiological systems (Figure 20.2).
The signals induce a shift in the bodyβs thermal setpoint for temperature regulation,
promoting warmth-seeking behavior while driving an endogenous increase
in body temperature and inducing fever (Osterhout et al. 2022). For example,
when components of the bacterial cell wall are bound by immune cells known as
macrophages, the macrophages produce the fever-inducing signals. The presence
of bacterial cell wall components is a strong indicator of bacterial infection, and
thus this pathway illustrates a mechanistic coupling between indications of pathogen
challenge and the fever response.
Consequences of Fever
In humans, higher fevers are associated with more severe infections. A number of
studies of human patients have shown that patients who receive fever- reducing
antipyretic drugs such as aspirin, acetaminophen, or ibuprofen recover less quickly
from viral infection (Hasday et al. 2000). These observations indicate that fever
may play a beneficial role in shortening the duration of infection. Studies of
patients with bacterial sepsis (a severe and very dangerous full-body inflammatory
response induced by bacterial infection) have often, but not always, revealed
a higher survival rate in patients that exhibit fever than in patients without fever.
It is important to recognize that this observed correlation does not provide direct
evidence of causation. Survival rates could be lower in patients without fever
because, for example, the inability to mount a fever response could be indicative
of more severe illness.
As we described in the introduction of this chapter, numerous nonhuman
species exhibit a fever response as well (Figure 20.3). In many of the species,
manipulative studies are possible. Animals infected with bacterial pathogens
and then treated with antipyretic drugs have more rapid bacterial proliferation
and higher mortality rates than individuals allowed to develop a normal fever
response. Similar results have been observed for viral infections. Because manipulating
temperature by pharmaceutical means may cause additional side effects
that make it hard to interpret the experimental results, researchers have also
conducted experiments in which they manipulate body temperature directly.
These studies tend to show comparable benefits to elevated body temperature.
Taken together, the correlational studies in humans and manipulative studies
in β¦
of bacterial cell wall components is a strong indicator of bacterial infection, and
thus this pathway illustrates a mechanistic coupling between indications of pathogen
challenge and the fever response.
Consequences of Fever
In humans, higher fevers are associated with more severe infections. A number of
studies of human patients have shown that patients who receive fever- reducing
antipyretic drugs such as aspirin, acetaminophen, or ibuprofen recover less quickly
from viral infection (Hasday et al. 2000). These observations indicate that fever
may play a beneficial role in shortening the duration of infection. Studies of
patients with bacterial sepsis (a severe and very dangerous full-body inflammatory
response induced by bacterial infection) have often, but not always, revealed
a higher survival rate in patients that exhibit fever than in patients without fever.
It is important to recognize that this observed correlation does not provide direct
evidence of causation. Survival rates could be lower in patients without fever
because, for example, the inability to mount a fever response could be indicative
of more severe illness.
As we described in the introduction of this chapter, numerous nonhuman
species exhibit a fever response as well (Figure 20.3). In many of the species,
manipulative studies are possible. Animals infected with bacterial pathogens
and then treated with antipyretic drugs have more rapid bacterial proliferation
and higher mortality rates than individuals allowed to develop a normal fever
response. Similar results have been observed for viral infections. Because manipulating
temperature by pharmaceutical means may cause additional side effects
that make it hard to interpret the experimental results, researchers have also
conducted experiments in which they manipulate body temperature directly.
These studies tend to show comparable benefits to elevated body temperature.
Taken together, the correlational studies in humans and manipulative studies
in β¦
downtimeβis far less than the cost of failing to produce a fever when it is needed
to clear an infection. Thus, we might expect that fevers should be relatively common,
and most should be unnecessary. If so, this means that in most cases, we
should be able to intervene safely, reducing fever with antipyretic drugs. Medical
technologiesβmost notably antibiotics and rehydration therapyβand improvements
in nutritional status further reduce the risk of death by infection relative
to what it would have been throughout much of our evolutionary history. Even
many of those infections that might historically have been lethal without a fever
response can now be safely controlled without fever. This is not to say that treating
most fevers with antipyretic drugs is necessarily a good idea. Further research
will be needed to resolve that issue. But it does provide an explanation for why we
can often safely interfere with fever, despite its role as an evolved defense against
pathogens.
Since people expressed curiosity, here's an excerpt from my textbook Evolution (coauthored with Lee Dugatkin) that addresses fever as an evolved defense and why we can treat it safely nonetheless.
13.04.2025 19:39 β π 233 π 27 π¬ 13 π 5
Latest update (same link): spokesperson says the conference ban for scientists is *reversed* & travel can resume "following established approval processes within each Institute & Center."
The reporting shows how much protocol seems to be getting set verbally, and not in writing. Such a disaster.
11.04.2025 01:16 β π 76 π 36 π¬ 2 π 2
Tracking Trumpβs Higher-Ed Agenda
The federal government is reshaping its relationship with the nationβs colleges. Use our new tracker to keep up with the latest.
the @chronicle.com has launched what is going to be a tremendously useful tool: a tracker of the Trump administration's activities affecting higher ed, particularly in the areas of civil rights, research, policy, and immigration. check it out: www.chronicle.com/article/trac...
09.04.2025 21:21 β π 108 π 67 π¬ 12 π 3
The Coming Out of a Transgender Scientist
"I know that I am making the right decision because whenever I think about changing my gender role, I am flooded with feelings of relief."
We're disappointed to see Ben Barres's powerful book "The Autobiography of a Transgender Scientist" among the ~400 titles removed from the Naval Academy Library. Needless to say, we're proud to have published his book and will keep it β and his memory βΒ alive.
08.04.2025 20:24 β π 2065 π 690 π¬ 16 π 21
Many of us use 2p scopes to image 3D volumes of brain. But then we analyze the data plane by plane, resulting in duplicated neurons, missed neurons, and low s/n. Let's go 3D!
Suite3D: Volumetric cell detection for two-photon microscopy
by @haydari.bsky.social & team.
www.biorxiv.org/content/10.1...
01.04.2025 11:10 β π 90 π 27 π¬ 0 π 2
BlueBerry Wireless Optogenetics
BlueBerry is a multi-channel wireless optogenetic system for freely moving mice and rats.
Kicking off Bluesky with BlueBerry, our open-access, multichannel wireless optogenetic device for freely moving rodents. Visit www.OptoBlueBerry.org for documentation and see its neuroscience applications from large-scale to social settings in our recent preprint: www.biorxiv.org/content/10.1... β
30.03.2025 16:52 β π 42 π 8 π¬ 0 π 3
Spent a moment compiling drawings from my past few years of funding applications, including so very many drawings of mice.
Posted here in hopes they save someone else the effort:
drive.google.com/file/d/1x_Jo...
23.03.2025 05:45 β π 80 π 9 π¬ 7 π 3
Theoretical Neuroscience | Understanding Cognition | Xiao-Jing Wang |
This textbook is an introduction to Systems and Theoretical/Computational Neuroscience, with a particular emphasis on cognition. It consists of three parts:
As our community increasingly shifts toward embracing the complexity of the brain, this new book by Xiao-Jing Wang will be an essential go-to.
He is among a small, prescient group that embraced important ideas before the rest of us. Here he unpacks them. 1/2
www.taylorfrancis.com/books/mono/1...
23.03.2025 19:28 β π 102 π 25 π¬ 4 π 6
Comparison of odorant concentrations in experimental studies, headspace of natural sources, and detection thresholds in rodents.
Glad to share this review of odor concentrations in nature versus experiments, just out in J Neurosci. Spoiler: they are far apart. We discuss implications for olfactory neuroscience and welcome debate. With @neuroboz.bsky.social @dewanlab.bsky.social, Betty Hong. www.jneurosci.org/content/45/1...
10.03.2025 02:59 β π 27 π 8 π¬ 0 π 1
08.03.2025 19:27 β π 19516 π 6707 π¬ 357 π 274
The Z-score method is apparently last and not just in alphabetical order for analyzing in vivo dopamine signals in the brain
www.biorxiv.org/content/10.1...
25.02.2025 13:25 β π 4 π 3 π¬ 0 π 0
Check out the scientific journey behind the newest FDA-approved pain medication! π Learn how NIH-funded research played a crucial roleβboth directly and indirectlyβin bringing this breakthrough to life. π§ͺ
22.02.2025 14:49 β π 72 π 24 π¬ 0 π 1
It's finally out!
Visual experience orthogonalizes visual cortical responses
Training in a visual task changes V1 tuning curves in odd ways. This effect is explained by a simple convex transformation. It orthogonalizes the population, making it easier to decode.
10.1016/j.celrep.2025.115235
02.02.2025 09:59 β π 153 π 44 π¬ 5 π 2
Really enjoyed this one as a preprint and happy to see it published relatively quickly! Super cool work re: the content of wake replay and adaptation.
31.01.2025 21:53 β π 18 π 3 π¬ 1 π 0
β€οΈ A hole in my heart has mended, finally having a taste of my scientific home - MIT Brain & Cog - while home in Singapore because of the IDG/McGovern Neurofrontiers symposium held at NUS over the past 2 days.
22.01.2025 16:46 β π 2 π 0 π¬ 0 π 0
Hippocampal neuronal activity is aligned with action plans - Nature
Using high-density electrophysiological recordings, how internally generated cell assemblies are updated by action plans to meet external goals is explored.
Itβs an incredible feeling to see something youβve poured your heart into come to life. This work was born from my curiosity about hippocampal βcognitive tuning.β
Our interpretation of the environment depends on our actions, constantly evolving as we pursue our goals
www.nature.com/articles/s41...
09.01.2025 22:36 β π 183 π 47 π¬ 5 π 3
Scientist, Professor
Passionate advocate for responsible and humane research involving animals.
#ThankAMonkey #EndSufferingThruScience
Views are my own.
Postdoc in Burgess Lab at UCL
Computational neuroscience, hippocampus π€π§
Loves hiking π» crossfit ππ» and cooking π³
Chief Editor of Nature Biomedical Engineering. Ph.D. Previously at Nature Methods. @rita_strack on the place formerly known as twitter.
Father, husband, scientist
Science. Pharma. Running.
Ex-MIT/Tufts/Berkeley. Sanofi. Tracksmith Boston Hares.
Professor #neuroscience #cerebellum Scintillon Institute, Salk Institute (Adjunct); previously Nanyang Technological University, UCSF, Columbia University, University of Illinois Urbana-Champaign
https://www.chenlaboratory.us/
Neuroscientist at Max Planck Florida Institute. Mom x3. New Yorker at heart. She/her
Clinical psychologist and researcher investigating anxiety disorders, Acute PTSD, dissociations, OCD, Affective Neuroscience, neuropsychoanalysis, application of nonlinear dynamical systems to psychology
https://montgomerycountypsychologist.com
Science integrity consultant and crowdfunded volunteer, PhD.
Ex-Stanford University. Maddox Prize/Einstein F Award winner
NL/USA/SFO.
#ImageForensics
@MicrobiomDigest on X.
Blog: ScienceIntegrityDigest.com
Support me: https://www.patreon.com/elisabethbik
Neuro and Developmental biologist. PostDoc at day. Supervillain at night. He/him #BlackLivesMatter #TransRightsAreHumanRights
@mads100tist@mastodon.social
I'm a scientist at Tufts University; my lab studies anatomical and behavioral decision-making at multiple scales of biological, artificial, and hybrid systems. www.drmichaellevin.org
PhD in BioPhysics.
Scientist who worked at the Genome Institute of Singapore. Worked on 3D lightsheet and confocal microscopy for 3D spatial transcriptomics via multiplexed error robust fluorescence in situ hybridisation (MERFISH).
Ph.D. cand. @NeuralCompLab @UCL, into cerebellum, #Neuropixels recordings, ML applied to neuro | authored NeuroPyxels |πͺπΊπ«π·π¨π|π₯| π§βπ³ βοΈ | πβ€οΈ
group leader @ HHMIJanelia, thinking about thinking, π¬#suite2p #cellpose #facemap #rastermap | diversity and open-science for better science | β | [β¦]
[bridged from https://neuromatch.social/@computingnature on the fediverse by https://fed.brid.gy/ ]
Lab head @HHMIJanelia
neuroscience, deep learning, large-scale recordings
#Kilosort, #Suite2p, #Cellpose, #Rastermap, #Facemap
Neuroscientist extraodinaire
PostDoc @ Burdakov Lab, ETH Zurich
Postdoc in the Brody lab at Princeton. Trying to understand how multiple brain regions coordinate to make decisions
Civic tech, social computing, online communities, comp social science
Previously: comp neuro, analytics (Bensmaia Lab @UChicago, Fulbright@LMU Munich, Bluebonnet Data, Amazon)
Boston -> Chicago -> Munich -> ...