𧬠What are the three stages of NGS/Omics (WGS/WES) data analysis? How do you start, and keep your workflow stress-free and organized? π
π― Here are some great resources to get started:
bit.ly/3WFIJPf
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π§¬How do you turn processing NGS / Omics data (Upstream analysis), into a stress-free and organized experience instead of chaos?
π‘ A Workflow Manager lets you run multiple tools.
π― My Go-To one is #Nextflow and πare great resources to get started:
bit.ly/4ntoOiq
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π A wellβorganized and wellβdocumented bioinformatics/computational biology project from day one is the key to reproducibility and peace of mind.
π οΈ My Top Go-To Resources to set-up and organize a computational project with sample project folder layout
lnkd.in/p/eccWNM-G
#ProjectSetup #Omics
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Associate Director of Community, The Carpentries #openscience Avid traveller. Views my own.
Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU)
𧬠Scientist (bioinformatics / genomics), π§π»βπ» software developer, πͺ΄ community builder.
Product Manager for open source @seqera.io
The Open Bioinformatics Foundation (OBF) is a non-profit volunteer-run organization that supports #OpenSource #bioinformatics. Member projects: #BioPerl, #BioJava, #BioRuby and #Biopython. We run an annual meeting, the Bioinformatics Open Source Conference
The Alliance of Genome Resources supports biological science via data integration, standardization of data models and interfaces, and unified outreach.
Find us at https://www.alliancegenome.org.
The official journal of the European Society of Human Genetics, providing insights into human genetics, genomics, molecular, clinical, and cytogenetics research
The world's largest open resource of human genetic variation. For help please use http://broad.io/gnomad_forum; feature requests/bug reports to http://broad.io/gnomad_github
Genetics in Medicine, an official journal of @theacmg.bsky.social
Site use policy: http://bit.ly/gimconduct. Cover image by http://istockphoto.com user fanjianhua
Advancing the promise of the Human Genome Project by interpreting the landscape of human genetic variation.
https://www.varianteffect.org
https://www.linkedin.com/company/atlas-of-variant-effects-alliance
The mission of the American Association for Cancer Research (AACR) is to prevent and cure cancer through research, education, communication, collaboration, science policy and advocacy, and funding for cancer research.
Geneticist, Skeletal Muscle, Drug development, Gene therapies. Non-coding RNA, and Zebrafish Aficionado. Lover of all things muscle. All posts are my own. Instagram @thealexanderlab
Lab website: https://www.uab.edu/medicine/peds/research/division-researc
The Earth BioGenome Project (EBP), a moonshot for biology, aims to sequence, catalog, and characterize the genomes of all of Earth's eukaryotic biodiversity over a period of ten years.
π²Keep up with all EBP updates: https://linktr.ee/earthbiogenomeproject
Dad, husband, and PhD π§βπ§βπ§βπ§π¨π»βπ Scientist, technologist, and engineer π¨βπ¬π±π¨βπ» Bibliophile π Philomath π€ Mental health advocate π
Passionate about #bioinformatics, #evolution, #genomics, #medicine, and #sre π§¬π©Ίπ»
Homepage: https://www.gawbul.io
European πͺπΊ | #Berlin π | PhD student in medical systems biology 𧬠with @leifludwig.bsky.social | Cooking & mountains
GA4GH sets standards and frames policies to expand genomic and health data use within a human rights framework.
https://www.ga4gh.org
Leading-edge research in all-things 'omics, including #microbiomes, #neurogenomics, #genomics, #fungi, #parasites, #cancer, and more. Visit us: igs.umaryland.edu & our sister site Maryland Genomics: marylandgenomics.org for #sequencing & #bioinformatics.
Supporting research to transform life, health and wellbeing. Weβre taking on three urgent health challenges: mental health, climate change & infectious disease.
The ESHG is a non-profit organization. Its aims are to promote research in basic and applied human and medical genetics, to ensure high standards in clinical practice and to facilitate contacts between all persons who share these aims.