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Sam Bogan

@snbogan.bsky.social

Postdoc @ UCSC | PhD @ UCSB | Ecophysiology, genomics, and evolution in marine systems 🐟 🧬 🐚 He/him/his | snbogan.github.io

978 Followers  |  712 Following  |  16 Posts  |  Joined: 12.09.2023  |  2.7007

Latest posts by snbogan.bsky.social on Bluesky

We're excited to be recruiting an NIH funded postdoc to work in the Coop lab at UC Davis. We're specifically interested in candidates who are want to work at the intersection of human genetics, GWAS, and population genetics modeling. Please RT

15.10.2025 15:53 β€” πŸ‘ 129    πŸ” 156    πŸ’¬ 1    πŸ“Œ 4
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Reference genome bias in light of species-specific chromosomal reorganization and translocations - Genome Biology Background Whole-genome sequencing efforts, have during the past decade, unveiled the central role of genomic rearrangementsβ€”such as chromosomal inversionsβ€”in evolutionary processes, including local a...

New paper out where we demonstrate how pop gen parameters and scoring of structural variants (inversions) could be affected by the choice of reference genome (both in terms of both quality and relatedness).
@unioslo-cees.bsky.social
@biovitenskap.bsky.social

link.springer.com/article/10.1...

15.10.2025 17:34 β€” πŸ‘ 18    πŸ” 6    πŸ’¬ 1    πŸ“Œ 2

Reminder, we’re hiring 2 PhD students for next year!! I’m extending the deadline to Nov 1, but please get your app in soon if you’re interested in joining us! More info is on our webpage. πŸ¦ πŸ¦‘

Please share with ECRs you know as well and check out our other open positio. (Postdoc!)

14.10.2025 22:46 β€” πŸ‘ 12    πŸ” 18    πŸ’¬ 0    πŸ“Œ 0
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Ecological constraints foster both extreme viral-host lineage stability and mobile element diversity in a marine community Phages are typically viewed as very rapidly evolving biological entities. Little is known, however, about whether and how phages can establish long-term genetic stability. We addressed this eco-evolut...

Phages evolve fast, or do they?
In oysters, some stay identical for years.
With >1,200 phages & 600 Vibrio genomes, we reveal long-term stability and new mobile elements.
Proud of this collaborative work across our teams (Roscoff-UdeM and @epcrocha.bsky.social www.biorxiv.org/cgi/content/...

12.10.2025 21:16 β€” πŸ‘ 84    πŸ” 50    πŸ’¬ 1    πŸ“Œ 2
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We're excited to share with everyone a preprint of our manuscript that resolves the cellular origins of the symbiosome in cnidarian-algal symbiosis through proteomics of the symbiosome, RNAi, and CRISPR/Cas9 experiments. ⬇️
www.biorxiv.org/content/10.1...

Read on below!

1/12 🧡

13.10.2025 21:59 β€” πŸ‘ 47    πŸ” 23    πŸ’¬ 3    πŸ“Œ 2
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Temperature can reverse sexual conflict, facilitating population growth Abstract. Sexual conflict frequently gives rise to adaptations that increase male reproductive success at the expense of harming females (β€œmale harm”) and

Temperature can reverse sexual conflict, facilitating population growth
doi.org/10.1093/evle...

Now in @evolletters.bsky.social by Roberto GarcΓ­a-Roa et al.

13.10.2025 17:31 β€” πŸ‘ 16    πŸ” 10    πŸ’¬ 0    πŸ“Œ 0
America’s brain drain

America’s brain drain

No words

30.05.2025 12:23 β€” πŸ‘ 2199    πŸ” 861    πŸ’¬ 93    πŸ“Œ 167

Duplication–translocation played an unexpectedly large role in the associations we found between gene copy number, temperature, and depth. Variation in copy number at tandem arrays formed by inter- and intrachromosomal translocations drove environmental gradients in AFP copy number.

10.10.2025 20:43 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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I am recruiting PhD students to join my lab at MSU starting Fall 2026! Please spread the word and reach out if you are interested and/or want to learn more!

08.07.2025 13:24 β€” πŸ‘ 12    πŸ” 15    πŸ’¬ 1    πŸ“Œ 2

It looks like you're right! No official 'no'. Fingers crossed!

09.10.2025 19:58 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thanks, Thomas! Unsuccessful cover at submission. It will live on in a slide or two.

09.10.2025 18:50 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Many wonderful coauthors to thank, including (on Bsky) @scotthotaling.bsky.social @notothentoma.bsky.social @ilianabista.bsky.social @paulbfrandsen.bsky.social

09.10.2025 18:15 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Excited to share this work, out today in MBE! In polar fishes, we found that antifreeze protein genes expanded in copy number at low temperatures and contracted in the deep sea, highlighting a role of depth and pressure in AFP evolution.

πŸ”— academic.oup.com/mbe/article/...

09.10.2025 18:13 β€” πŸ‘ 43    πŸ” 18    πŸ’¬ 2    πŸ“Œ 5
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Exceedingly low genetic diversity in snow leopards due to persistently small population size | PNAS Snow leopards (Panthera uncia) serve as an umbrella species whose conservation benefits their high-elevation Asian habitat. Their numbers are belie...

Very excited to share that our work assessing the genomic diversity of snow leopards has come out today in PNAS! Spoiler alert - they have the lowest genetic diversity of all big cats!
www.pnas.org/doi/10.1073/...
news.stanford.edu/stories/2025...
@petrovadmitri.bsky.social @elliecat.bsky.social

07.10.2025 21:10 β€” πŸ‘ 51    πŸ” 19    πŸ’¬ 3    πŸ“Œ 0
Full text in links

Full text in links

Full text in links

Full text in links

Faculty positions in animal morphogenesis that may be filled at the Assistant or Associate Professor level in one of my favorite Departments" Cell and Systems Biology at the University of Toronto. 1/n
jobs.utoronto.ca/job/Toronto-...
jobs.utoronto.ca/job/Toronto-...

06.10.2025 18:09 β€” πŸ‘ 37    πŸ” 34    πŸ’¬ 2    πŸ“Œ 1
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Another record month for bioRxiv - and further evidence the pandemic spike+dip was just that and growth continues. Thanks to all involved and that includes 🫡

01.10.2025 15:51 β€” πŸ‘ 143    πŸ” 43    πŸ’¬ 1    πŸ“Œ 4
SMBE2026 | Final call for symposia

SMBE2026 | Final call for symposia

πŸ” Please share - we remind the SMBE community that the Call for Symposia for SMBE2026 in Copenhagen is open.

We invite you to submit a symposium proposal to help shape the scientific content of our annual meeting.

πŸ—“οΈ Deadline: October 15th

More information: smbe2026.org/symposia

#SMBE2026

01.10.2025 08:36 β€” πŸ‘ 7    πŸ” 15    πŸ’¬ 0    πŸ“Œ 0
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NSF Graduate Research Fellowship Program (GRFP)

It seems the GRFP solicitation is FINALLY released (like 5 minutes ago)! Due dates have also been pushed back, thankfully! πŸ§ͺ πŸ”­

www.nsf.gov/funding/oppo...

26.09.2025 15:46 β€” πŸ‘ 35    πŸ” 36    πŸ’¬ 2    πŸ“Œ 2
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ecoevojobs.net 2025-26

UPDATE: The 2025-2026 list of faculty and postdoc positions in ecology and evolutionary biology is out! Be sure to check out this active and helpful community run resources! docs.google.com/spreadsheets...

19.09.2025 21:47 β€” πŸ‘ 236    πŸ” 227    πŸ’¬ 3    πŸ“Œ 6

Cool... a global focus on three core traits of ectotherms: metabolic rate, development time and fecundity. ShareTrait: Towards interoperable and reusable individual trait-based data in ectotherms #OpenTraits #FunctionalTraits besjournals.onlinelibrary.wiley.com/doi/abs/10.1... πŸ§ͺ🌐

19.09.2025 12:50 β€” πŸ‘ 22    πŸ” 5    πŸ’¬ 1    πŸ“Œ 0

"Assistant Professor - Plant Resilience to Climate Change at University of California, Berkeley, CA, USA
*Application Deadline: 11/1/2025"

Read more here: https://arabidopsis.org/news/jobs/view?file=20250919_UCB.pdf

#PlantSciJobs

19.09.2025 23:06 β€” πŸ‘ 12    πŸ” 20    πŸ’¬ 1    πŸ“Œ 0
American College of Physicians Calls for Removal of Secretary Kennedy at HHS | ACP Online Statement attributable to:Jason M. Goldman, MD, MACPPresident, American College of Physicians

162,000 doctors strong: The American College of Physicians demands RFK Jr. be removed as HHS Secretary, warning he is undermining vaccines, science, and public health.

www.acponline.org/acp-newsroom...
#BlueSky #MedSky #NewsSky #NurseSky #SciSky

20.09.2025 00:05 β€” πŸ‘ 1441    πŸ” 548    πŸ’¬ 13    πŸ“Œ 12
LinkedIn This link will take you to a page that’s not on LinkedIn

🧨 The Naturhistoriska riksmuseet has a position open for a Tenure-Track group Leader position (DDLS fellow).

17 M SEK start-up (1.6 million euros, which will account for your salary / 2 PhDs / 2 Postdocs / plenty of money for starting projects and sending peoeple to conferences).

lnkd.in/d5jNr_Ti

17.09.2025 12:27 β€” πŸ‘ 5    πŸ” 5    πŸ’¬ 1    πŸ“Œ 0

Ant reproduction is getting weirder and weirder. Here’s the latest: queens of a Mediterranean harvester ant mate with males from a different species and then lay eggs that clonally inherit those males’ genome. I.e., they lay eggs that develop into a different species. 🀯

05.09.2025 22:07 β€” πŸ‘ 52    πŸ” 25    πŸ’¬ 1    πŸ“Œ 2
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Rapid Divergence of Visual Systems and Signaling Traits to Contrasting Light Regimes During Early Speciation of African Crater Lake Cichlid Fish Abstract. Sensory adaptation is widely hypothesized to drive ecological speciation, yet empirical evidence from natural populations undergoing early stage

Very proud of this extremely collaborative piece: academic.oup.com/mbe/article/...
Here, we show that divergence in visual systems - in response to differences in the light environment - leads to rapid divergence in sexually selected colour traits. Work brilliantly led by Madeleine Carruthers. πŸŸπŸ‘€πŸŽ¨

16.09.2025 16:23 β€” πŸ‘ 37    πŸ” 20    πŸ’¬ 1    πŸ“Œ 0
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New preprint led by undergrad Owen Moosman! We uncover extensive haplotype diversity in antifreeze protein gene copy number in polar Zoarcoidei fishes, and report new tools to evaluate assembly uncertainty and switch error in phased genomes www.biorxiv.org/content/10.1...

16.09.2025 17:33 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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San JosΓ© State University - Details - Assistant Professor - Environmental Studies

The School of Planning, Policy, and Environmental Studies at San JosΓ© State University is hiring an Assistant Professor of Environmental Studies. We welcome applicants from all fields of environmental studies who apply an environmental justice lens to their work. jobs.sjsu.edu/sj/en-us/job...

16.09.2025 01:25 β€” πŸ‘ 58    πŸ” 54    πŸ’¬ 0    πŸ“Œ 2
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Canada Research Chair (Tier I) in Translational Crop Genomics in Sustainable Agriculture in Calgary, ... Canada Research Chair (Tier I) in Translational Crop Genomics in Sustainable Agriculture in Calgary, ...

University of Calgary is hiring a tier I CRC professorship in crop genomics. Come work in one of the most beautiful corners of the world!
careers.ucalgary.ca/jobs/1668764...

09.09.2025 21:32 β€” πŸ‘ 23    πŸ” 23    πŸ’¬ 0    πŸ“Œ 0
A green Axelrodichthys fish

A green Axelrodichthys fish

Really venturing out of my comfort zone for this next critter in the Kem Kem series - a fish! This is Axelrodichthys, a giant mawsoniid coelacanth with a potential upper length of 4m. Size comparison below ⬇️

#paleoart #sciart

15.09.2025 20:11 β€” πŸ‘ 251    πŸ” 45    πŸ’¬ 11    πŸ“Œ 1

@snbogan is following 20 prominent accounts