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Sam Bogan

@snbogan.bsky.social

Postdoc @ UCSC | PhD @ UCSB | Ecophysiology, genomics, and evolution in marine systems 🐟 🧬 🐚 He/him/his | snbogan.github.io

1,003 Followers  |  731 Following  |  22 Posts  |  Joined: 12.09.2023  |  1.9348

Latest posts by snbogan.bsky.social on Bluesky


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Postdoctoral Fellow in Eco-evolutionary Modelling and Machine Learning The Department of Ecology, Environment and Plant Sciences (DEEP) at Stockholm University is located in the Arrhenius Laboratories on the Frescati campus. Currently, approximately 100 people, including

Please help me spread this postdoc position with me at Stockholm University, Sweden!!!! su.varbi.com/en/what:job/...

20.02.2026 14:16 β€” πŸ‘ 26    πŸ” 29    πŸ’¬ 1    πŸ“Œ 2
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Supporting exciting biological sciences ideas and impacts on AI and biotechnology

New letter from BIO leadership...

www.nsf.gov/bio/updates/...

18.02.2026 13:18 β€” πŸ‘ 9    πŸ” 8    πŸ’¬ 2    πŸ“Œ 3
BAPG Spring 2026 Bay Area Population Genomics Conference

The next BAPG has been announced! April 11 at Davis organized by the inimitable @jrossibarra.bsky.social! bapg-conference.github.io

19.02.2026 18:33 β€” πŸ‘ 18    πŸ” 14    πŸ’¬ 0    πŸ“Œ 1

New round of NSF GRFP declines without review. If you were affected:
1) Write NSF
2) Write your Congressperson
3) CC us at grfp@grant-witness.us so we can compile + follow up

Details and template at grant-witness.us/grfp-letter

This is the link to the post: bsky.app/profile/noam...

05.02.2026 15:27 β€” πŸ‘ 33    πŸ” 35    πŸ’¬ 0    πŸ“Œ 3
A line curve showing number of awards for fiscal year 2026 compared to fiscal years 2021-2025 across NSF. The fiscal year 2026 curve lies well below curves for other fiscal years.

A line curve showing number of awards for fiscal year 2026 compared to fiscal years 2021-2025 across NSF. The fiscal year 2026 curve lies well below curves for other fiscal years.

NSF Update

Funding curve overall. A little bit of progress in the past week, but only a little bit.

Now by Directorate...

1/11

13.02.2026 21:21 β€” πŸ‘ 520    πŸ” 299    πŸ’¬ 22    πŸ“Œ 52

ARGformer: learning on ancestral recombination graphs with transformers https://www.biorxiv.org/content/10.64898/2026.02.11.705405v1

15.02.2026 00:21 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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Estimating Organism Abundance Using Within‐Sample Haplotype Frequencies of eDNA Data Environmental DNA (eDNA) provides powerful insights into species presence and community composition but remains limited in its capacity to infer species abundance or population structure. Here, we sh...

🧬 My haplotype paper is out!

We show that deviations between within-sample and population-level haplotype frequencies can be used to estimate how many individuals contributed to an eDNA sample.

No tissue references needed, just metabarcoding data and some population genetics.

#eDNA #PopGen

13.02.2026 16:54 β€” πŸ‘ 41    πŸ” 14    πŸ’¬ 2    πŸ“Œ 1
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F.D.A. Refuses to Review Moderna Flu Vaccine The vaccine maker’s shots involve the successful Covid vaccines’ RNA technology. Health Secretary Robert F. Kennedy Jr. has broadly rejected it, canceling millions of dollars in research projects.

The vaccine maker Moderna said on Tuesday that the FDA had notified the company that the agency would not review its mRNA flu vaccine, the latest sign of federal health policy that has become hostile to vaccine development.

11.02.2026 04:30 β€” πŸ‘ 264    πŸ” 152    πŸ’¬ 34    πŸ“Œ 34
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Davis Summer Population Genomics Program Want to learn population genetics? Please fill out this form to indicate your potential interest in a 2-week intensive online summer population genetics course taught by Jeffrey Ross-Ibarra and Graham...

Fun news! @gcbias.bsky.social and I are teaching a 2-week online population genetics workshop this summer to raise money for the Center for Population Biology at UC Davis. We're trying to gauge interest -- please fill this out if you might be interested! And please share broadly!

09.02.2026 18:24 β€” πŸ‘ 137    πŸ” 169    πŸ’¬ 7    πŸ“Œ 5
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Graduate Students’ NSF Fellowship Applications Are Being β€œReturned Without Review” - Eos Graduate students applying for NSF funding have had their applications returned without reviewβ€”even though their proposed research appears to fall squarely within the fields of study outlined in the p...

Students applying for NSF funding are having their applications β€œreturned without review” for being β€œineligible,” despite their proposed research falling squarely within the application guidelines. eos.org/research-and...

06.02.2026 20:58 β€” πŸ‘ 88    πŸ” 70    πŸ’¬ 2    πŸ“Œ 11
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22.01.2026 17:36 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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22.01.2026 17:36 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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22.01.2026 17:36 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Other nudibranch finds from last weekend:

black and white dorid, warty shag rug, red dorid, and Hopkins rose

22.01.2026 17:36 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Spanish shawl nudibranchs chowing on tree hydroids!

#dockfouling #tidepooling #nudibranch

20.01.2026 16:55 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Applications to join the Computational Approaches to Early Evolution workshop are still accepted! Do not miss your chance to attend this event full of discussions on the computational methods for studying early life! πŸ¦ πŸ’»πŸ§¬

forms.oist.jp/form/computa...

16.01.2026 14:15 β€” πŸ‘ 12    πŸ” 8    πŸ’¬ 0    πŸ“Œ 0
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πŸ“’ I would be happy to host a 2-year DDLS Postdoc at my group using museum genomics to look at recent adaptation in insect pollinators πŸ“‰πŸπŸ¦‹πŸ§¬

If you are interested in this (or have other project ideas) get in touch ASAP!

The application deadline is March 31.

INFO πŸ‘‰ www.scilifelab.se/data-driven/...

15.01.2026 13:55 β€” πŸ‘ 17    πŸ” 23    πŸ’¬ 0    πŸ“Œ 0
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Want to study the genomics of repeated adaptation with data from hundreds of species? New funding for non-Canadians @ grad or postdoc level. Internal competition at UCalgary with very short deadline so please get in touch ASAP!!
sshrc-crsh.canada.ca/en/funding/o...

09.01.2026 18:41 β€” πŸ‘ 60    πŸ” 63    πŸ’¬ 1    πŸ“Œ 1
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I'll be presenting on a very different topic than usual for #SICB2026... "Strengths, challenges, & experiences of neurodivergent faculty in academia" at 8:45am on Jan. 7th in Room A105 as part of Symposium 12: Disabled & Neurodivergent perception, community, & identity in the biosciences (1/2)

01.01.2026 20:00 β€” πŸ‘ 18    πŸ” 9    πŸ’¬ 3    πŸ“Œ 0
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#SICB2026 Stop by B117 at 11am tomorrow (Sun 1/4) to hear how genome architecture in polar fishes shaped adaptation to freezing

I’ll share fun new results linking an expansion in genome size and repetitive elements in polar fishes to adaptive duplications of antifreeze protein genes

03.01.2026 18:25 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Book cover for Reproducible Code guide. The cover has a red background with a large yellow-bodied black-headed stag beetle.

Book cover for Reproducible Code guide. The cover has a red background with a large yellow-bodied black-headed stag beetle.

Excited to launch the new improved Reproducible Code guide from @britishecologicalsociety.org @methodsinecoevol.bsky.social FREE online here! www.britishecologicalsociety.org//wp-content/... Amazing work by some very talented ECRs. We hope it’s useful!

16.12.2025 15:03 β€” πŸ‘ 312    πŸ” 196    πŸ’¬ 6    πŸ“Œ 9

Assistant Professor position in Marine Invertebrate Organismal Biology at Friday Harbor Labs!
apply.interfolio.com/178804

16.12.2025 22:29 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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The Tidyomics Ecosystem – tidyomicsBlog An introduction to the tidyomics ecosystem, including principles, core packages, publications, and community resources for tidy omic analysis.

It's official! The #tidyomics blog is up! πŸš€

Here, the introductory post
tidyomics.github.io/tidyomicsBlo...

This blog aims to publish not only news about our community but also anything related to tidy interfaces, opinions, events, and more.

Plz share! πŸ™
@bioconductor.bsky.social #rstats

07.12.2025 23:07 β€” πŸ‘ 27    πŸ” 13    πŸ’¬ 0    πŸ“Œ 1

@debbiemleigh.bsky.social and I are inviting abstracts for our symposium S05 showcasing research at the interface of molecular evolution, population genomics, and biodiversity monitoring.

08.12.2025 07:22 β€” πŸ‘ 12    πŸ” 11    πŸ’¬ 0    πŸ“Œ 1
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Career Opportunities Applicant Log-In

My department at California State University Northridge is hiring! We're looking for a new colleague studying microbiology or molecular/cellular biology. I'm not on the search committee, but happy to answer questions about the department and campus, and life in LA

buff.ly/Pc1KOaC

04.12.2025 19:19 β€” πŸ‘ 62    πŸ” 90    πŸ’¬ 1    πŸ“Œ 0
PhD candidate in biology β€” theoretical and statistical modeling (m/f/x)

PhD position available for theoretical and statistical modeling in my joint @gevol.bsky.social project with @luisapallares.bsky.social on the evolution of transcriptional variability and its role in adaptation and evolutionary innovation.
See
job-portal.lmu.de/jobposting/6...

26.11.2025 14:37 β€” πŸ‘ 5    πŸ” 12    πŸ’¬ 0    πŸ“Œ 1
Post image Fish embryos under the microscope

Fish embryos under the microscope

Interested in thermal biology? Please join our new and growing grass roots initiative, the Thermal Ecology Alliance, initiated by @patricepottier.bsky.social. πŸ§ͺπŸŸπŸ¦‘πŸŒ‘οΈ

Sign up here: www.thermalecologyalliance.org#participation

Check who already signed up:
www.thermalecologyalliance.org#community

03.11.2025 12:58 β€” πŸ‘ 46    πŸ” 27    πŸ’¬ 3    πŸ“Œ 3
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Oxygen supersaturation has been reported to protect aquatic animals from heat waves. We tested this in a large collaborative experiment on many species of fish and crustaceans. Our new paper in @plosbiology.org shows that the effect of hyperoxia on thermal tolerance is negligible. Unfortunately.

05.11.2025 10:34 β€” πŸ‘ 52    πŸ” 30    πŸ’¬ 2    πŸ“Œ 2
MBE | Temperature and Pressure Shaped the Evolution of Antifreeze Proteins in Polar and Deep Sea Zoarcoid Fishes
A graphic visualizing the finding by Bogan et al. that antifreeze protein (AFP) genes increased in copy number among shallow-water, polar species of Zoarcoidei fishes. Top left: Pholis gunnellus photographed by Chris Isaacs (CC-BY-NC). Top right: Cebidichthys violaceus photographed by Alex Heyman (CC0 1.0). Bottom left: Lycenchelys sp. photographed by Julien Savoie (CC BY 4.0). Bottom right: Lycodes sp. photographed by Julien Savoie (CC BY 4.0).

MBE | Temperature and Pressure Shaped the Evolution of Antifreeze Proteins in Polar and Deep Sea Zoarcoid Fishes A graphic visualizing the finding by Bogan et al. that antifreeze protein (AFP) genes increased in copy number among shallow-water, polar species of Zoarcoidei fishes. Top left: Pholis gunnellus photographed by Chris Isaacs (CC-BY-NC). Top right: Cebidichthys violaceus photographed by Alex Heyman (CC0 1.0). Bottom left: Lycenchelys sp. photographed by Julien Savoie (CC BY 4.0). Bottom right: Lycodes sp. photographed by Julien Savoie (CC BY 4.0).

@snbogan.bsky.social @notothentoma.bsky.social @scotthotaling.bsky.social @paulbfrandsen.bsky.social et al. explore the evolution of type III antifreeze proteins in deep sea zoarcoid fishes.

πŸ”— doi.org/10.1093/molbev/msaf219

#evobio #molbio

21.10.2025 09:43 β€” πŸ‘ 18    πŸ” 8    πŸ’¬ 0    πŸ“Œ 1

We're excited to be recruiting an NIH funded postdoc to work in the Coop lab at UC Davis. We're specifically interested in candidates who are want to work at the intersection of human genetics, GWAS, and population genetics modeling. Please RT

15.10.2025 15:53 β€” πŸ‘ 162    πŸ” 210    πŸ’¬ 1    πŸ“Œ 5

@snbogan is following 20 prominent accounts