Jason Hilton's Avatar

Jason Hilton

@jasonhilton.bsky.social

data wrangler, metadata enthusiast

52 Followers  |  149 Following  |  17 Posts  |  Joined: 26.11.2024  |  1.7799

Latest posts by jasonhilton.bsky.social on Bluesky

Preview
a man in a suit is standing in front of a bakery display and says just whatever makes sense ALT: a man in a suit is standing in front of a bakery display and says just whatever makes sense

Second, check out Andy Beshear. You may hear a lot more from him in the coming years.
For comparison...

04.08.2025 15:37 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

First, a quick guide to visiting Lexington, KY:
1. Wear blue, not red
2. Visit my sister-in-law's coffee shop The Greenery (Erin's the one feeding the Governor Alanis lyrics)

04.08.2025 15:36 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Congrats @tiagolubiana.bsky.social !

31.07.2025 17:52 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Preview
Fund scholars who tackle urgent issues β€” from misinformation to error spotting Scientists who are not tied down by fixed research agendas can pivot nimbly to work where they are most needed. It’s time to build career paths with these researchers in mind.

www.nature.com/articles/d41...

24.07.2025 20:41 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

@cmungall.bsky.social had me at "structured data nerd". Great perspectives from Chris & @anshulkundaje.bsky.social

03.07.2025 15:29 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Right? Can't we enjoy the game in absence of a black box model developed by a TV station that has nothing to gain by practicing statistical rigor but benefits from sensationalism & drama?

06.06.2025 18:21 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Highly recommend Nexus by Yuval Noah Harari. Refreshing take on the potential of AI by relating it to innovations, movements & information systems throughout history.
...so read that, watch The Mitchells vs the Machines, and you should be all set for the Age of AI

19.05.2025 20:27 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Another fun CELLxGENE update from this week: We now support ATAC-seq fragments files. You can download the fragments file for all unpaired scATAC-seq datasets and many multiome datasets. More ATAC-seq features (and data) are coming. Happy #DNADay!

25.04.2025 22:58 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
Preview
Cellxgene Data Portal Find, download, and visually explore curated and standardized single cell datasets.

Big CELLxGENE news! No longer just human & mouse data.
Now supported: #celegans #zebrafish #drosophila #rat #pig #rabbit and several non-human primates
Please see info on how to contribute data: cellxgene.cziscience.com/docs/032__Co...

17.04.2025 19:58 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

"Fortunately, cellxgene classes follow an ontology, a robust structure that defines relationships among the labels." 😍
Very cool to see how they leveraged the ontological relationships to refine many labels!

17.04.2025 15:55 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
Preview
Asian diversity in human immune cells The Asian Immune Diversity Atlas (AIDA) is a 5-nation single-cell reference atlas of circulating immune cells from healthy donors in diverse populations. AIDA highlights the impact of sub-continental ...

So thrilled to see this incredible study published today. Led by some brilliant & amazing people and without these types of studies, any "human <fill in the blank> cell atlas" is destined to just be a "European/white human <fill in the blank> cell atlas".

19.03.2025 23:14 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Post image

The #GENETICS issue is now live! You'll find updates from 6 model organism databases & other knowledgebases including AgBioData Consortium, Candida Genome Database, @yeastgenome.bsky.social, SpudDB, Unified Phenotype Ontology, & @zfinmod.bsky.social.

What's on the cover? β¬‡οΈπŸ§΅

18.03.2025 16:00 β€” πŸ‘ 3    πŸ” 6    πŸ’¬ 1    πŸ“Œ 3
Preview
Preprint sites bioRxiv and medRxiv launch new era of independence The popular repositories, where scientists post research before peer review, will be managed by a new organization called openRxiv.

A new chapter has begun for two of the world’s most popular preprint platforms, bioRxiv and medRxiv, with the launch of a non-profit organization that will manage them

https://go.nature.com/4iCVnHL

11.03.2025 14:03 β€” πŸ‘ 94    πŸ” 34    πŸ’¬ 0    πŸ“Œ 2
Rare Disease Day

Rare Disease Day

At #ASHG, we recognize the power of #humangenetics & genomics research in advancing rare disease diagnosis, treatment, and advocacy. In celebrating #RareDiseaseDay, let's push the boundaries of discovery and support the millions of people living with rare genetic conditions.

28.02.2025 14:52 β€” πŸ‘ 4    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
Post image Post image Post image Post image

πŸ’œπŸŒ It’s Rare Disease Day! πŸŒπŸ’œ

Tonight, let’s shine a light for the 300 million people living with a rare disease, including Charcot-Marie-Tooth (CMT).

Join the #LightUpForRare movement @ 7 PM
πŸ“Έ Share a photo of your lights and tag #LightUpForRare to raise awareness! www.youtube.com/watch?v=fIvq...

28.02.2025 09:37 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Preview
White Paper - Global Biodata Coalition

The Global Biodata Coalition is running community webinars on 26 & 27 Feb to discuss their recent White Paper on biodata resource sustainability and seek feedback. View the White Paper and register for the webinar here bit.ly/40PyQ4p.
#biocuration #database #knowledgebase

25.02.2025 19:31 β€” πŸ‘ 2    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
Preview
Biocuration Community Survey 2025 This survey aims to gather and analyze information about the field of biocuration. This survey is being conducted by the International Society for Biocuration (ISB) to identify potential gaps or ineq...

Prior to the #Biocuration Careers workshop at the #Biocurtation2025 conference, we are conducting a survey of biocurators and data stewards about their jobs. Please respond here: forms.gle/DJ7irabs27em...

18.02.2025 20:17 β€” πŸ‘ 1    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0
Preview
Chan Zuckerberg CELLxGENE Discover Find, download and visually explore curated and standardized single-cell datasets

Embarrassed & ashamed to only just now learn it's #LoveDataWeek. Promise to do better next year. Until then, a corpus of 100M+ cells (and growing) of single-cell expression data, all with raw counts & standardized metadata, and all openly available? That's a lot to love. cellxgene.cziscience.com

14.02.2025 21:35 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Wonderful to see @kendraturkkubo.bsky.social & other friends and colleagues from my grad lab get recognized for their incredible work.

14.02.2025 16:01 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Thrilled to share PERFF-seq in its final form, where we expand on its sensitivity, applicability, and more! I’m so grateful for the all-star crew (brought together by @caleblareau.bsky.social) that made this happen!! Read thread below for more! πŸŽ‰

09.01.2025 00:58 β€” πŸ‘ 8    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Demiltons have discussed some possibilities (mutated bird, splashing whale) but requires further investigation. Please send cut & cooked cookies.

09.02.2025 15:59 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Open science, data sharing, standards, etc. posts will come. But for now, I just gotta say that the fam has been loving Overcooked 2 on the Switch. Highly recommend, especially if you're looking for a safe space to throw tortillas at your spouse & yell at your kid for burning the rice.

07.02.2025 17:55 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Correct, CELLxGENE does not reprocess data. A big reason why contributors are motivated to submit is because the visualization will represent their analysis, their figures, etc.
CELLxGENE does not store any raw sequence data, so that would be kinda a different resource entirely.

13.12.2024 22:41 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

I don't feel like I've been on @bsky.app long enough to get name-checked πŸ˜…

13.12.2024 22:39 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

@jasonhilton is following 20 prominent accounts