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Danny Park

@dannyjpark.bsky.social

I use genomics to study the evolution and spread of human pathogens and lead pathogen genomic analytics at the Broad Institute. Also: @dpark@mstdn.science ORCID: 0000-0001-7226-7781 GitHub: dpark01

456 Followers  |  257 Following  |  12 Posts  |  Joined: 23.11.2024  |  1.4401

Latest posts by dannyjpark.bsky.social on Bluesky

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NIH to ax grants on vaccine hesitancy, mRNA vaccines Move reflects vaccine skepticism of health secretary Robert F. Kennedy Jr.

The NIH is abruptly terminating at least 33 research grants for projects studying vaccine hesitancy. Projects studying mRNA vaccines may be next.
Important story by my colleague Sara Reardon in @science.org
πŸ§ͺ #IDsky

11.03.2025 00:43 β€” πŸ‘ 278    πŸ” 160    πŸ’¬ 14    πŸ“Œ 27
Don’t tread on me

Don’t tread on me

That yellow one has higher production valueβ€”someone prepared ahead of time for this

08.03.2025 01:42 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Four letters, Trump

Four letters, Trump

This one took a little work to decode but once you realize the second one is a uracil and the others are amino acids…

08.03.2025 01:42 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Hello my name is science you killed my funding prepare to die from: preventable diseases, cancer, unresearched epidemics, unadministered vaccines, undiscovered cures, inaccessible healthcare

Hello my name is science you killed my funding prepare to die from: preventable diseases, cancer, unresearched epidemics, unadministered vaccines, undiscovered cures, inaccessible healthcare

08.03.2025 01:42 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
It’s grant season and I took time off for this

It’s grant season and I took time off for this

A few selected signs for your enjoyment

08.03.2025 01:42 β€” πŸ‘ 6    πŸ” 0    πŸ’¬ 2    πŸ“Œ 0
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a cartoon of homer simpson holding a card ALT: a cartoon of homer simpson holding a card

Bluetorial:

The announcement to move scientific review out of the institutes and centers into the Center for Scientific Review (CSR) and its potential consequences

07.03.2025 03:32 β€” πŸ‘ 284    πŸ” 140    πŸ’¬ 4    πŸ“Œ 24

You may be asking, yes it felt good but does it matter?

Yes, it does--maybe not in the way you think. Here is my thoughts from college years during Korean military dictatorship.

1/4

07.03.2025 23:37 β€” πŸ‘ 4    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0

This is, of course, not the manner in which the federation was intended to be useful, but the difference between β€œWashington got nuked by bad guys” and the present scenario is, perhaps, not that measurable

02.03.2025 14:42 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

But the data (and publications) we produced all these past decades will still carry on in the other two members of the federated consortium that are still backed by functioning governments at the moment.

02.03.2025 13:55 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Of course, groups like mine are probably in for a bigger world of hurt if NIH’s eRA Commons disappears (we just submitted a grant this week that may never see the light of day but we’ll keep doing it until we can’t anymore).

02.03.2025 13:55 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Disabling NCBI would cause a world of hurt for those of us who’ve built up all our APIs around it (instead of the European or Japanese equivalents) but at least the data is still safe even if the US disappeared. Yes including PubMed.

02.03.2025 13:55 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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ww (@ww@tldr.nettime.org) Attached: 2 images So, three nameservers out of seven for the pubmed.ncbi.nlm.nih.gov are broken. If you try to look at the web site, you stand a 3/7 chance of encountering something that is broken. ...

Yes, all of nih.gov going down is bad of course, regardless of whether it’s malicious or a technical oops that will get fixed eventually (tldr.nettime.org/@ww/11408997...), but I do encourage everyone to learn about the federated nature of the INSDC (including Genbank and PubMed)

02.03.2025 13:55 β€” πŸ‘ 19    πŸ” 5    πŸ’¬ 3    πŸ“Œ 0
Government Biomedical data

HT to Sean Davis for creating a status page for NIH websites: stats.uptimerobot.com/Zrqh8AhvKn - simultaneous worth sharing and sad.

02.03.2025 13:11 β€” πŸ‘ 35    πŸ” 18    πŸ’¬ 0    πŸ“Œ 4
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Paul Farmer’s Moral Clarity Offers Hope, Amidst Chaos And Darkness On the 3rd anniversary of Dr Paul Farmer's death, several leaders reflect on his lessons for dealing with the ongoing crisis in global health and development

On the 3rd anniversary of Dr Paul Farmer's death, several leaders reflect on his lessons for dealing with the ongoing crisis in global health & development

Paul Farmer’s Moral Clarity Offers Hope, Amidst Chaos And Darkness

www.forbes.com/sites/madhuk...

20.02.2025 17:11 β€” πŸ‘ 118    πŸ” 50    πŸ’¬ 3    πŸ“Œ 15

On the bright side, the wording in NOT-OD-25-068 is pretty clear that all non-US based research institutions currently receiving NIH funding are now allowed to double their F&A rate.

08.02.2025 00:33 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
NOT-OD-25-068: Supplemental Guidance to the 2024 NIH Grants Policy Statement: Indirect Cost Rates NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Supplemental Guidance to the 2024 NIH Grants Policy Statement: Indirect Cost Rates NOT-OD-25-068. OD

1. Today the NIH director issued a new directive slashing overhead rates to 15%.

I want to provide some context on what that means and why it matters.

grants.nih.gov/grants/guide...

08.02.2025 00:18 β€” πŸ‘ 7061    πŸ” 4120    πŸ’¬ 259    πŸ“Œ 906

Disastrous consequences aside, what's fascinating about NOT-OD-25-068 is how it publicly names and shames specific institutions in a way that NIH has never done before. It's as if someone broke into eRAcommons earlier this week, threw it into their AI bot, and asked it to justify their actions.

08.02.2025 00:26 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
NOT-OD-25-068: Supplemental Guidance to the 2024 NIH Grants Policy Statement: Indirect Cost Rates NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Supplemental Guidance to the 2024 NIH Grants Policy Statement: Indirect Cost Rates NOT-OD-25-068. OD

NIH cuts indirect rates on grants to 15%.

This will be the end of American excellence in science.

Universities will struggle and many (likely most) will terminate their research programs.

Independent research institutions will not be able to survive this.

grants.nih.gov/grants/guide...

07.02.2025 23:53 β€” πŸ‘ 399    πŸ” 187    πŸ’¬ 20    πŸ“Œ 8
Groundbreaking Ebola vaccination trial launches today in Uganda

Groundbreaking Ebola vaccination trial launches today in Uganda

In a global first, Uganda’s Ministry of Health, the World Health Organization (WHO) and other partners today launched a first-ever vaccine trial for Ebola from the Sudan species of the virus, and at an unprecedented speed for a randomized vaccine trial in an emergency.🧡

03.02.2025 21:22 β€” πŸ‘ 11873    πŸ” 2144    πŸ’¬ 168    πŸ“Œ 164

Excellent, rapid work by Uganda’s CPHL and partners and also a great use case for @pathoplexus.org

03.02.2025 21:09 β€” πŸ‘ 8    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

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