Reid Alderson's Avatar

Reid Alderson

@reidalderson.bsky.social

Group Leader at Helmholtz Munich ๐Ÿ‡ฉ๐Ÿ‡ช Disordered proteins ๐Ÿ, protein dynamics ๐Ÿƒโ€โ™‚๏ธ, and #NMR ๐Ÿงฒ Past: UW ๐Ÿฆก, Oxford ๐Ÿ‡ฌ๐Ÿ‡ง, NIH ๐Ÿ‡บ๐Ÿ‡ธ, Toronto ๐Ÿ‡จ๐Ÿ‡ฆ

449 Followers  |  388 Following  |  7 Posts  |  Joined: 16.11.2024  |  2.1107

Latest posts by reidalderson.bsky.social on Bluesky

Post image

We are back with an exciting seminar on September 8 at 3pm CEST! Weโ€™ll hear from Prof. Birthe Kragelund and Maximilian Vieler (@uu.se).

Register to attend:
tinyurl.com/PMCseminar2

Recordings of previous seminars: www.youtube.com/@PMCModularity

15.08.2025 15:35 โ€” ๐Ÿ‘ 17    ๐Ÿ” 8    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Preview
NMR TITAN user survey This survey aims to assess the impact of NMR TITAN on biomolecular research and identify priorities for future development. The form should take approximately 5 minutes to complete. Your responses may...

Iโ€™m carrying out a short survey of NMR TITAN users - if youโ€™ve made use of this tool in your research, or have suggestions for its future development, Iโ€™d be grateful for your input: forms.gle/MMXYwSozszhi... #nmrchat

28.08.2025 14:13 โ€” ๐Ÿ‘ 6    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
BPS2026 Annual Meeting | Biophysical Society The BPS2026 Annual Meeting in San Francisco will showcase Biophysics by the Bay, highlighting the exciting advances in science and technology brought forth by big data and AI. ย This yearโ€™s programโ€ฆ

Get important feedback from your community and move your work forward. Share your research at #bps2026!

Submit an abstract today buff.ly/oOjstk6

27.08.2025 12:01 โ€” ๐Ÿ‘ 12    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Helmholtz Munich Joins Germanyโ€™s Instruct-ERIC Centre for Structural Biology

Helmholtz Munich Joins Germanyโ€™s Instruct-ERIC Centre for Structural Biology

#HelmholtzMunichโ€™s BNMRZ has joined Germanyโ€™s Instruct-ERIC Centre ๐Ÿ”ฌ

Instruct-ERIC provides open access to advanced structural biology technologies. #BNMRZ advances innovation in #NMR methods, drug discovery, and imaging - boosting the German Centreโ€™s capabilities.

๐Ÿ‘‰ Read more: t1p.de/pjtyv

13.08.2025 07:15 โ€” ๐Ÿ‘ 11    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Preview
Seedless: on-the-fly pulse calculation for NMR experiments - Nature Communications The authors develop a computational tool to design NMR pulses, based on the GRadient Assisted Pulse Engineering approach, that can calculate optimal pulse shapes on the fly during the measurements, to...

Nature Communications (open) Seedless: on-the-fly pulse calculation for NMR experiments, Charles J. Buchanan, Gaurav Bhole, Gogulan Karunanithy, Virginia Casablancas-Antrร s, Adeline W. J. Poh, Benjamin G. Davis, Jonathan A. Jones* & Andrew J. Baldwin* www.nature.com/articles/s41... #NMRchat #NMR ๐Ÿงฒ

08.08.2025 14:03 โ€” ๐Ÿ‘ 7    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
European Solid-State NMR School

Do you want to learn about all relevant aspects of biomolecular solid-state NMR, from theory to application?

Join the 10th European Solid-State NMR Summer Schoolโ—๏ธ

๐Ÿ—“๏ธ October 20-24, 2025 | Garching, Germany

๐Ÿ“Œ Application Deadline: 01.09.2025

www.bio.nat.tum.de/ocb/upcoming...

#NMRchat #BioNMR

05.08.2025 14:46 โ€” ๐Ÿ‘ 7    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Post image

BNMRZ Symposium Ultra-Highfield NMR and 4D Structural Biology โ€“ From Mechanisms to Therapies, November 6โ€“7, 2025, TUM Institute for Advanced Study, Garching @ias-tum.bsky.social registration opens soon www.bnmrz.org/4dstructbiol #BNMRZ #NMRchat #NMR ๐Ÿงฒ

04.08.2025 20:14 โ€” ๐Ÿ‘ 10    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Post image

And it's out!

I'm thrilled to share our new paper (Adriaenssens et al., Nat Cell Biol 2025).

This paper describes a new mechanism for the initiation of autophagosome biogenesis.

We found that this WIPI-ATG13-driven pathway is preferentially used by a group of transmembrane autophagy receptors.

25.07.2025 09:43 โ€” ๐Ÿ‘ 75    ๐Ÿ” 22    ๐Ÿ’ฌ 6    ๐Ÿ“Œ 2

Featuring: The 2026 Biophysical Society Lecture, Lewis E. Kay, University of Toronto, The Essentiality of Solution NMR Spectroscopy in the Post-AlphaFold Era, Monday, February 23, 8:00 PM, Moscone Center www.biophysics.org/2026meeting/... #NMRchat ๐Ÿงฒ

03.07.2025 17:08 โ€” ๐Ÿ‘ 5    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
European Solid-State NMR School

We are happy to announce the โ€œ10th European solid-state NMR summer schoolโ€ (October 19-24, 2025) that will take place at the Technical University Munich (@TUM.de) in Garching, Germany. #NMRchat #BioNMR

For more detailed information, please follow the link:
www.bio.nat.tum.de/ocb/upcoming...

11.06.2025 18:37 โ€” ๐Ÿ‘ 4    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
A general substitution matrix for structural phylogenetics. Abstract. Sequence-based maximum likelihood (ML) phylogenetics is a widely used method for inferring evolutionary relationships, which has illuminated the

New paper from the lab from Sriram Garg in my group. We introduce a general substitution matrix for structural phylogenetics. I think this is a big deal, so read on below if you think deep history is important. academic.oup.com/mbe/advance-...

11.06.2025 14:01 โ€” ๐Ÿ‘ 95    ๐Ÿ” 52    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 2
Preview
Job details Job details

๐Ÿšจ We're hiring! Join our excellent Electron Microscopy Facility at @istaresearch.bsky.social as an a Cryo-EM Specialist, providing support for groundbreaking research in a fantastic environment: ist.ac.at/en/job/?titl... #CryoEM #MicroscopyJobs #ScienceCareers

10.06.2025 07:57 โ€” ๐Ÿ‘ 11    ๐Ÿ” 8    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
Preview
> Malene R. Jensen @ IBS Grenoble Research team of CNRS research director Malene Ringkjรธbing Jensen at the Institut de Biologie Structurale, Grenoble, France

Two postdoctoral positions in the group of Dr. Malene R. Jensen at the Institute for Structural Biology in Grenoble, France, protein kinase (MAPK) cell signaling pathways (incl NMR, X-ray crystallography and cryo-electron microscopy) www.jensen-nmr.fr #NMRjobs #NMRchat #NMR ๐Ÿงฒ

05.06.2025 12:46 โ€” ๐Ÿ‘ 7    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Nice summary of our ipSAE score for rescoring protein-protein and protein/nucleic-acid interactions in AF2, AF3, and Boltz-1. It works better than ipTM for full-length Uniprot sequences.

03.06.2025 22:50 โ€” ๐Ÿ‘ 28    ๐Ÿ” 8    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Preview
SHARK:ย webย serverย forย alignment-free homology assessment for intrinsically disordered and unalignable protein regions Abstract. Whereas alignment has been fundamental to sequence-based assessments of protein homology, it is ineffective for intrinsically disordered regions

Are you looking for homologous sequences but alignments do not seem to work? SHARK is available as a webserver: compare sequences or search against precomputed IDR datasets: bio-shark.org @narjournal.bsky.social @mpi-cbg.de @csbdresden.bsky.social @poldresden.bsky.social
doi.org/10.1093/nar/...

28.05.2025 21:24 โ€” ๐Ÿ‘ 21    ๐Ÿ” 13    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

Our manuscript on dsRNA sensor OAS2 from the lab of @oliveiramann.bsky.social is now out in @cp-molcell.bsky.social ! Thanks again to the whole team for their effort putting this story together!

23.05.2025 16:31 โ€” ๐Ÿ‘ 15    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Preview
Advances in uncovering the mechanisms of macromolecular conformational entropy - Nature Chemical Biology Protein conformational entropy plays a vital role in functions like binding and catalysis. This Perspective discusses three ways macromolecules use conformational entropy: prepaying entropic costs, re...

A Perspective by @stephanieaw.bsky.social and @fraserlab.com discusses ways macromolecules use conformational entropy to control binding, catalysis, and allostery

www.nature.com/articles/s41...

25.04.2025 15:35 โ€” ๐Ÿ‘ 42    ๐Ÿ” 19    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Still unclear, indeed. I had read a score of 0.7 in your original message but now see that it was 7.0 โ€” sorry about that!

Maybe they reweighted the 0-1 scale?

08.04.2025 20:17 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Post image

Hi Roland, I wonder if this could be the Conservation of Interaction Orientation (CIO) score (0-1) that is mentioned near the end of the Results section? It is derived from geometric analysis of interacting superfamily pairs (ISPs) (Fig 5D, 5E) with a citation to the CIO reference in the methods

08.04.2025 18:26 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Preview
Where do proteins go in cells? Next-generation methods map the moleculesโ€™ hidden lives Spatial proteomics is helping biologists to uncover how cells work by mapping where proteins operate.

www.nature.com/articles/d41...

07.04.2025 13:53 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
SHARKโ€capture identifies functional motifs in intrinsically disordered protein regions Increasing insights into how sequence motifs in intrinsically disordered regions (IDRs) provide functions underscore the need for systematic motif detection. Contrary to structured regions where moti...

Identifying functional motifs in disordered regions is challenging. We gave it a try. Check out SHARK-capture, an alignment-free method to detect SLiMs. Congrats Chi Fung Willis Chow @swlenz.bsky.social et al. @mpi-cbg.de @csbdresden.bsky.social @poldresden.bsky.social doi.org/10.1002/pro....

18.03.2025 20:05 โ€” ๐Ÿ‘ 36    ๐Ÿ” 17    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1

Thank you, Lukas!

11.03.2025 08:33 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

#NMR ๐Ÿงฒ

11.03.2025 08:33 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
PhD Position in Structural Biology (f/m/x)

An open #PhD position is available in my lab in Munich ๐Ÿ‡ฉ๐Ÿ‡ช If you are interested in structural biology, #AlphaFold, or disordered proteins, see below for more details.

jobs.helmholtz-muenchen.de/jobposting/b...

#science #PhD #research

11.03.2025 06:57 โ€” ๐Ÿ‘ 20    ๐Ÿ” 8    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1

Congratulations, Woonghee! Very well deserved recognition of your work and your groupโ€™s research

26.02.2025 16:03 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
Postdoctoral Research Associate in Disordered Protein Interactions

We're looking for a #postdoc to join our team at KCL Chemistry @kingsnmes.bsky.social. If you're interested in disordered proteins, please get in touch!

3 year post. Ad closes 12 March: www.kcl.ac.uk/jobs/105866-...

24.02.2025 16:57 โ€” ๐Ÿ‘ 15    ๐Ÿ” 10    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

๐Ÿงต on our preprint: Zhang & Skolnick's TM score for comparing model of protein to experimental structures of same protein. The d_j are essentially the same as the aligned error in Alphafold. After any structure alignment, it's the displacement of model Calpha from experimental Calpha of residue j.

16.02.2025 02:13 โ€” ๐Ÿ‘ 60    ๐Ÿ” 16    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 4
Preview
Program Head - Molecular Medicine, The Hospital for Sick Children Research Institute - Toronto (City), Ontario (CA) job with The Hospital for Sick Children (SickKids) Research Institute | 667223 Provide leadership and mentorship to members of the Molecular Medicine Program and influence the scientific direction of the Research Institute

Come be my boss!
We're looking for a new Program Head for the Molecular Medicine Program at the Hospital for Sick Children.
Toronto, Canada
(the deadline has been extended from Jan 31)
Please Re-post.
jobs.sciencecareers.org/job/667223/p...

24.01.2025 23:02 โ€” ๐Ÿ‘ 29    ๐Ÿ” 35    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

Very exciting to see, Gogs! Congratulations and looking forward to seeing Bind develop into the future

17.02.2025 21:55 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Bind Bind is a non-profit research organization dedicated to making disordered proteins druggable

NMR will be a cornerstone of our experimental toolkit at Bind. We're developing advanced NMR methods enhanced by AI-based tools to rapidly illuminate disordered protein interactions in powerful new ways. Find out more: bindresearch.org #NMRChat #AI ๐Ÿงฒ

11.02.2025 09:49 โ€” ๐Ÿ‘ 7    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

@reidalderson is following 20 prominent accounts