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@jeffspear.bsky.social

Postdoctoral scholar, University of Chicago, Tsegai lab | I study mammalian locomotor evolution | I approach my research using integration, biomechanics, and phylogenetic methods.

56 Followers  |  111 Following  |  29 Posts  |  Joined: 05.11.2024  |  2.0491

Latest posts by jeffspear.bsky.social on Bluesky

I spent so much time in this exhibit as a kid! I have distinct memories of the yellow herrerosaurs, the frequently origins of life puppet show, and the ramp behind the apatosaurus. Also a horse evolution puppet show I think? What a blast from the past. Thanks for sharing!

24.09.2025 02:06 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Curious whether anyone knows if authors of scientific papers are members of this Class, or whether we signed that away to the publishers? Regardless, it's interesting to see which of my papers were used.

07.09.2025 02:01 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Thanks for the shoutout! Doing this on live primates is tough. We've been discussing whether we can do more but for now we're focusing on cadavers, with some surprising results so far.

05.09.2025 00:19 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Comparison of ankle dorsiflexion using XROMM and external angular kinematics in a quadrupedally walking macaque Summary: Different approaches to measuring ankle dorsiflexion capture different underlying kinematics. Evidence indicates that dorsiflexion at the talocrural joint is actively limited during walking i...

First official postdoc paper out in @jexpbiol.bsky.social! We compare different approaches to studying kinematics in a macaque ankle and note that the talocrural joint seems to contribute minimally to dorsiflexion of the foot during stance phase. journals.biologists.com/jeb/article/...

04.09.2025 13:12 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 0    πŸ“Œ 1

Very cool! I'm confused as to why we see spikes in use of cold climates during periods of global warming (PETM & Mid Miocene) when they were presumably rarer. Does this indicate an inverse relationship between use and availability of cold climates or am I misinterpreting what climate categories are?

04.09.2025 11:50 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Buried in the regime's political takeover letter of the Smithsonian is the worst bit. Unlike exhibits, which are non-destructive towards primary materials, temporary in nature, and reversible, the foundational collections are irreplacable. They want to be able to throw stuff out.

13.08.2025 01:59 β€” πŸ‘ 2123    πŸ” 1031    πŸ’¬ 81    πŸ“Œ 115

I am no constitutional scholar, but I can't help but feel that "the President gets to dictate what every university can teach and what every television station should broadcast" is closer to what the founding fathers were worried about when it comes to free speech than trigger warnings on syllabi.

23.07.2025 16:27 β€” πŸ‘ 12150    πŸ” 2850    πŸ’¬ 72    πŸ“Œ 43
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The Fourth Of July, Rethought Can Any Nation So Conceived Long Endure?

www.popehat.com/p/the-fourth...

04.07.2025 15:21 β€” πŸ‘ 654    πŸ” 241    πŸ’¬ 46    πŸ“Œ 55

One of the marvelous things about the United States - something it shares with Rome, I might add - is that American identity is fundamentally legal in definition and almost totally binary.

Regardless of my politics or his, Zohran Mamdani, naturalized in 2018, is every bit as much an American as me.

25.06.2025 23:34 β€” πŸ‘ 668    πŸ” 77    πŸ’¬ 11    πŸ“Œ 6
Deep-time history of primate behavior and ecology as revealed by ancestral state reconstructions

Using ancestral state reconstructions to generate hypotheses about primate evolution and testing them against the fossil record. urldefense.proofpoint.com/v2/url?u=htt...
This has been in the works a long time and I'm really pleased to finally have it out! Thanks to all who contributed.

31.05.2025 16:45 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Musing: one side effect of constantly defending (eg an institution or a political party) against disinformation and bad faith criticism is that you can become habituated to ignoring all criticism (as bad faith), which makes it difficult to learn, adapt, grow, and address your actual weaknesses.

21.05.2025 15:18 β€” πŸ‘ 402    πŸ” 68    πŸ’¬ 13    πŸ“Œ 9

Population wide supplementation as a public health intervention is not new and has yielded incredible health benefits through the years don't let the misguided attacks on fluoridated water fool you.
Why do you think iodide is added to table salt? Since we are intent of forgetting history here is a 🧡

15.05.2025 19:55 β€” πŸ‘ 310    πŸ” 143    πŸ’¬ 12    πŸ“Œ 5
NYT headline: β€œKennedy Advises New Parents to β€˜Do Your Own Research’ on Vaccines” 
Subheader:
β€œIn an interview with Dr. Phil, the health secretary offered false information about vaccine oversight and revealed a lack of basic understanding of new drug approvals.”

NYT headline: β€œKennedy Advises New Parents to β€˜Do Your Own Research’ on Vaccines” Subheader: β€œIn an interview with Dr. Phil, the health secretary offered false information about vaccine oversight and revealed a lack of basic understanding of new drug approvals.”

β€œAnd I’m like, what do you mean, you β€˜do your own research’? You running a double-blind study in your living room, dawg?”
- A guy walking ahead of me with his friends on a NYC sidewalk in 2021, also my favorite overheard dialogue of the entire pandemic

30.04.2025 11:36 β€” πŸ‘ 27371    πŸ” 6761    πŸ’¬ 756    πŸ“Œ 373
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PhD Timeline xkcd.com/3081

25.04.2025 15:32 β€” πŸ‘ 60465    πŸ” 20748    πŸ’¬ 602    πŸ“Œ 833

TLDR: the administration wants to remove habitat loss from the definition of "harm" for endangered species, which will effectively gut the ESA.

I just commented. If you're in any way interested in ecology, nature, and the protection of endangered species, you should, too. Free daily action!

21.04.2025 18:20 β€” πŸ‘ 644    πŸ” 631    πŸ’¬ 5    πŸ“Œ 10
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Integration, Modularity, and Homoplasy in the Forelimbs of Apes - Evolutionary Biology Covariation constrains and biases the evolution of morphological traits, leading to similar phenotypes appearing repeatedly in certain clades. Here, I test whether this phenomenon can explain the evol...

New paper on evolvability in apes, and whether it can help us make sense of the messy evolution of locomotion in that group. My results suggest a feedback effect between integration and the response to selection. We need more research on how integration evolves! link.springer.com/article/10.1...

20.04.2025 16:14 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

We do know it struggles on Windows computers without administrator privileges, but other than that while it's bare bones it's working as intended as far as we know. So curious to send it out into the world and see what people think!

14.04.2025 03:11 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

I can't really say it's under 'active development', but if you find bugs or have feature suggestions, let me know and we'll add them to our list!

14.04.2025 03:11 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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GitHub - spearw/phylo-match Contribute to spearw/phylo-match development by creating an account on GitHub.

A tool to quickly match taxon names between a dataset and a phylogenetic tree, built for folks doing phylogenetic comparative analyses: github.com/spearw/phylo...

14.04.2025 03:11 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

But operationalizing this for species is a headache, to put it mildly. And it is borderline impossible to think about species in the fossil record as anything other than fuzzy sets of morphological variation (i.e., to give them morphological definitions).

14.04.2025 02:51 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

This approach is easier to take with higher taxa when we can mostly assume there is no gene flow between groups. In this case we can simply 'define' a it as 'the last common ancestor of X and Y and all of its descendants' or 'all species more closely related to A than to B'.

14.04.2025 02:51 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

If taxa are 'defined' by morphology, etc., then individuals can cease to be a member of that taxon, which is nonsense from a phylogenetic perspective. Snakes are still tetrapods, even if they no longer have four limbs, because four limbs is a tool to diagnose tetrapods, not the way we define them.

14.04.2025 02:51 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Definition and Diagnosis in the Phylogenetic System on JSTOR Timothy Rowe, Definition and Diagnosis in the Phylogenetic System, Systematic Zoology, Vol. 36, No. 2 (Jun., 1987), pp. 208-211

It's worth mentioning the distinction between definition and diagnosis of biological taxa: Taxa must be *defined* by their ancestry, but can be diagnosed (i.e., recognized) with specific characteristics and morphology. See Rowe (1987) for a concise review: www.jstor.org/stable/24132...

14.04.2025 02:51 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Countries & Regions The United States has trade relations with more than 75 countries around the world. The top five export markets for U.S. goods in 2013 were: Canada, $300.3 billion Mexico, $226.2 billion China, $122 b...

I didn't believe it even for them, but it seems true (data from ustr.gov/countries-re...):
(143.5-438.9)/438.9 = -0.673 (China, 67%)
(370.2-605.8)/605.8 = -0.389 (EU, 39%)
(13.1-136.6)/136.6 = -0.904 (Vietnam, 90%)
(42.3-116.3)/116.3 = -0.636 (Taiwan, 64%)
(79.7-148.2)/148.2 = -0.462 (Japan, 46%)

03.04.2025 01:52 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

This is how I tend to think about our history, to be honest: the story of American greatness is a story of overcoming the flaws in our republic.

And there are periods of retreat and backlash, but in the past, we've always renewed the quest for that more perfect union.

01.04.2025 23:36 β€” πŸ‘ 476    πŸ” 71    πŸ’¬ 4    πŸ“Œ 4

If you let them do this to immigrants - again *legal* immigrants - you will have *no way* to know when they start doing it to citizens.

They'll feed you the exact same lies and refuse to disclose the identities of the people disappeared (as they're doing now).

24.03.2025 04:20 β€” πŸ‘ 301    πŸ” 39    πŸ’¬ 5    πŸ“Œ 0

Letter to leadership of universities being targeted, to run in Chronicle tomorrow. Academic friends, pls sign if you are a US citizen and tenured (ie it’s safe for you to do so)
β€œWe Must Leverage the Strength of Our Institutions and Stand Together”
Text in replies

docs.google.com/forms/d/e/1F...

23.03.2025 03:33 β€” πŸ‘ 462    πŸ” 137    πŸ’¬ 16    πŸ“Œ 9
Long letter from NSF Director Sethuraman Panchanathan, available here: https://nsf-gov-resources.nsf.gov/files/Letter-to-the-Community.pdf

Long letter from NSF Director Sethuraman Panchanathan, available here: https://nsf-gov-resources.nsf.gov/files/Letter-to-the-Community.pdf

πŸ§ͺ The NSF director is lying to you.

Let’s fact check 7 claims from yesterday’s letter to the community, while pointing out 3 critical omissions. 🧡

12.03.2025 12:51 β€” πŸ‘ 491    πŸ” 316    πŸ’¬ 11    πŸ“Œ 42

As JFK famously said, "Let every nation know, whether it wishes us well or ill, that we shall pay any price, bear any burden, meet any hardship, support any friend, oppose any foe to assure the survival and the success of liberty. Unless they have the gall to say facts to my face. Then f*** 'em."

28.02.2025 23:33 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

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