Thrilled to share our new Forum article in @cp-trendsmicrobiol.bsky.social
We (@charmievang.bsky.social @evanbrenner.bsky.social @jananiravi.bsky.social) explore how #MultiOmics + #MachineLearning/#DeepLearning can transform AMR predictionโspotlighting emerging opportunities and challenges!
               
            
            
                02.06.2025 06:35 โ ๐ 3    ๐ 3    ๐ฌ 0    ๐ 1                      
            
         
            
        
            
            
            
            
                                                 
                                                         
                                                
    
    
    
    
            Presented today at #GLBIO2025 @iscb.bsky.social  on ML + genome data for antimicrobial resistance prediction.
Really grateful for the great questions & conversations! 
#bioinformatics #genomics #AMR
               
            
            
                15.05.2025 03:15 โ ๐ 2    ๐ 0    ๐ฌ 0    ๐ 0                      
            
         
            
        
            
            
            
            
                                                 
                                                         
                                                
    
    
    
    
            First conference of Spring 2025, ASM Rocky Mountain ! Presented a poster on an ongoing project "Unveiling antimicrobial resistance mechanisms in ESKAPE through machine learning" @asm.org #coloradostate
               
            
            
                29.04.2025 03:50 โ ๐ 1    ๐ 0    ๐ฌ 0    ๐ 0                      
            
         
            
        
            
            
            
            
                                                 
                                            From earning Dr. to joining postdoc in US. Incredible year!
                                                
    
    
    
    
            A year ago today, I crossed the bridge and earned the title of PhD. 
Grateful for the challenges, growth, and new beginnings. Hereโs to the journey ahead!
#OneYearAsPhD #LifeAfterPhD
               
            
            
                20.12.2024 06:29 โ ๐ 3    ๐ 0    ๐ฌ 0    ๐ 0                      
            
         
            
        
            
            
            
            
                                                 
                                                
    
    
    
    
            Attended the Workshop on Computational Modeling of Proteins for Infectious Disease Researchers at Seattle Childrenโs Research Institute. This hands-on training introduced tools like AlphaFold, ChimeraX, & Rosetta for target discovery and therapeutics. Thanks to @niaidnews.bsky.social for sponsoring!
               
            
            
                12.12.2024 04:11 โ ๐ 6    ๐ 1    ๐ฌ 0    ๐ 0                      
            
         
            
        
            
            
            
            
                                                 
                                                
    
    
    
    
            Our Big Fantastic Virus Database (BFVD) is now published NAR! It contains protein structure predictions of major viral clades, enhanced by petabase-scale homology search and it's explorable on the web.
๐ bfvd.foldseek.com
๐พ bfvd.steineggerlab.workers.dev
๐ academic.oup.com/nar/advance-...
               
            
            
                23.11.2024 21:12 โ ๐ 339    ๐ 127    ๐ฌ 6    ๐ 5                      
            
         
            
        
            
            
            
            
                                                 
                                            Holiday Selfie Station!
                                                         
                                            Holiday Selfie Station!
                                                
    
    
    
    
            The postdocs (me and @evanbrenner.bsky.social ) enjoying the Holiday Selfie Station on day 1 of Byte Into Sweets, Holiday Edition at @cubiomedinfo.bsky.social | @cuanschutz.bsky.social
               
            
            
                03.12.2024 17:32 โ ๐ 9    ๐ 5    ๐ฌ 0    ๐ 0                      
            
         
    
         
        
            
        
                            
                    
                    
                                            Bringing the palaeobiology community together! Find out more at https://palaeoverse.org/
Reposts are not endorsements.
                                     
                            
                    
                    
                                            Paleontology professor at UC Santa Cruz, studying mass extinctions and effects of climate change on marine life in the fossil record. He/him, Canadian, โ ๏ธ. https://people.ucsc.edu/~mclapham
                                     
                            
                    
                    
                                            A public resource for the global scientific community, seeking to provide researchers and the public with information about the entire fossil record | www.paleobiodb.org
                                     
                            
                    
                    
                                    
                            
                    
                    
                                            Bacterial ecology, evolution and epidemiology | Mathematical and statistical modelling | Genomics | AMR. Assistant professor at the University of Lausanne. https://wp.unil.ch/evolutionaryepidemiology
                                     
                            
                    
                    
                                            Post-Doctoral Research Fellow - The University of Colorado Anschutz Medical Campus, Colorado, USA
                                     
                            
                    
                    
                                            Senior Lecturer at EdinburghUni, PI at UppsalaUni. Genomics of mammals, particularly primates, and their microbes from bad samples #aDNA #museums. AE with GBE SMBE
                                     
                            
                    
                    
                                            Supporting education, stewardship, management, policies and research in relation to Antibiotics. Annual Meetings.
http://www.asainc.net.au
                                     
                            
                    
                    
                                            Assistant Prof at Case Western studying microbial interactions in the oral and vaginal microbiomes (and beyond!). Also find me outside, baking, coloring, or sleeping.
thelewinlab.com
                                     
                            
                    
                    
                                            Microbiome Management group leader @LeibnizATB | @maxplanck.de | former #MSCA @applebiome. #plant, seed and #environmental #microbiomes Opinions my own
                                     
                            
                    
                    
                                            ๐ช๐บ ๐ซ๐ท ๐ฆ๐บ in ๐ฌ๐ง (he/him) | www.mericlab.com
Human microbiome(s), pathogen ecology & host-microbe genomics 
Associate Professor @uniofbath.bsky.social
Clinical Affiliate @bakerresearchau.bsky.social @cambridgebaker.bsky.social 
๐Bath, UK
                                     
                            
                    
                    
                                            Comics by Jorge Cham: Oliver's Great Big Universe, Elinor Wonders Why, ScienceStuff and PHD Comics
                                     
                            
                    
                    
                                            donโt tell me you arenโt
โ๏ธ you can also dm me your fav sci memes to post here
                                     
                            
                    
                    
                                            Working to understand ecology, epidemiology and evolution of pathogenic bacteria at University of Oxford. 
Account operated by group members.
                                     
                            
                    
                    
                                            Test Engineering Specialist @ Accenture Australia | ISTQB, TOSCA, UiPath, AccelQ, Selenium with Cucumber, Postman, Cypress with JS | ALM, Qtest, PractiTest, Zephyr, Jira, AWS | Utilities | Mining/Infrastructure | B&FS
                                     
                            
                    
                    
                                            PhD, MSc Genetics & Mol Biology | Postdoc Microbial Bioinformatician @ Baker | Adjunct RA @ Monash | Honorary Fellow @ UniMelb | https://www.gazollavolpiano.com
                                     
                            
                    
                    
                                            Empowering Computational Biology, Transforming Global Science!
The International Society for Computational Biology is a scholarly society for advancing understanding of living systems through  computation, and communicating scientific advances worldwide.
                                     
                            
                    
                    
                                            Yearly Bioinformatics Open Source Conference since 2000, run by @OpenBio.
BOSC 2026 will be between July 12-16, 2026, as part of ISMB 2026
BOSC 2025 was July 21-22, 2025, in Liverpool, UK as part of ISMB/ECCB 2025
https://www.open-bio.org/events/bosc/
                                     
                            
                    
                    
                                            Federation of European Microbiological Societies | https://fems-microbiology.org | Magnifying microbial impact | Follow the not-for-profit FEMS Journals: @femsjournals.bsky.social | #FEMSJournals | #microbiology
                                     
                            
                    
                    
                                            Assistant Professor at CU Boulder
Studying the human microbiome
https://www.colorado.edu/lab/olm/