Scott Edmunds cuts the cake at the 2025 GigaScience birthday party at ISMB/ECCB 2025
An open letter about the recent cuts at GigaScience: www.open-bio.org/2025/09/30/2...
(open for signatures until the end of October)
#OpenScience #OpenData #GigaScience
30.09.2025 21:02 β π 8 π 12 π¬ 1 π 3
Our report on the #OpenSource #Bioinformatics Conference just came out yesterday, and it's already been viewed 48 times! Ok, not quite viral, but not too shabby...
12.09.2025 03:28 β π 2 π 0 π¬ 0 π 0
YouTube video by GigaScience Press
GigaScience Press: An Award-Winning Publisher
GigaScience Press FTW! youtu.be/yp_pYwb78G4?...
07.08.2025 02:20 β π 0 π 1 π¬ 0 π 0
Thrilled to present @embl.org's #EBISearch at @bosc.bsky.social at the worldβs biggest #Bioinformatics conference, made by the @ebi.embl.org team to make life science data more discoverable. π§¬π
#Bioinformatics #EMBLEBI #DataDiscovery #LifeSciences #ComputationalBiology #ResearchTools #FAIRdata
28.07.2025 08:40 β π 4 π 2 π¬ 0 π 0
Jason Williams, Tony Burdett, and Wiriya Rutvisuttinunt
@jasonwilliamsny.bsky.social, Tony Burdett, and Wiriya Rutvisuttinunt outside the @gigascience.bsky.social party at #BOSC2025
27.07.2025 11:15 β π 5 π 0 π¬ 0 π 0
BOSC review and organizing committee members
At the end of #BOSC2025, the organizing committee was joined on stage by the review committee members who were able to go to Liverpool.
27.07.2025 11:07 β π 6 π 2 π¬ 0 π 0
BOSC chair Nomi Harris
During the #BOSC2025 closing remarks, chair @nomiharris.bsky.social thanked the BOSC sponsors (@cziscience.bsky.social @seqera.io @gigascience.bsky.social) for covering registration for 12 BOSC presenters.
27.07.2025 11:05 β π 6 π 2 π¬ 0 π 0
MΓ³nica MuΓ±oz-Torres next to podium
@monimunozto.bsky.social, wearing a π-green dress, introducing the second set of #OpenData talks at #BOSC2025
26.07.2025 19:00 β π 5 π 0 π¬ 1 π 0
Part of the audience at #BOSC2025
An attentive audience at #BOSC2025
26.07.2025 14:18 β π 2 π 1 π¬ 0 π 0
Munazah Andrabi asks question at #BOSC2025
26.07.2025 14:09 β π 2 π 0 π¬ 0 π 0
Susheel Varma
...and the other one
26.07.2025 14:04 β π 1 π 0 π¬ 0 π 0
Susheel Varma
@susheelvarma.com giving one of two back-to-back short talks at #BOSC2025.
26.07.2025 14:03 β π 3 π 0 π¬ 1 π 0
@proflhunter.bsky.social makes a point during a Q&A at #BOSC2025, while continuing to show off his #BOSC2024 socks
26.07.2025 13:58 β π 8 π 2 π¬ 0 π 0
Chris Mungall
@cmungall.bsky.social preparing for his #BOSC2025 / #BOKR2025 keynote talk
26.07.2025 13:07 β π 6 π 0 π¬ 0 π 0
It was a great opportunity to present about RO-Crate at #BOSC2025 / #BOKR2025. Please send me any more questions you may have. Slides and poster: zenodo.org/records/1584...
24.07.2025 06:31 β π 4 π 2 π¬ 0 π 0
#BOSC2025 participants (including @monimunozto.bsky.social) interacting.
23.07.2025 22:32 β π 4 π 0 π¬ 0 π 0
Radhika Khetani
Radhika Khetani asking the #BOSC2025 panelists a question
23.07.2025 22:29 β π 4 π 1 π¬ 0 π 0
Monica Munoz-Torres and Scott Edmunds
During the #BOSC2025 panel on Data Sustainability, @scedmunds.bsky.social shared his perspective from the world of open scientific publishing while moderator @monimunozto.bsky.social listened attentively.
23.07.2025 22:24 β π 4 π 1 π¬ 0 π 0
Tiffany Callahan and Augustin Luna enjoy a laugh with Yongqun "Oliver" He.
After the joint #BOSC2025 / #BOKR2025 session, BOKR co-organizers Tiffany Callahan and Augustin Luna (@cannin@bsky.social) enjoy a laugh with Yongqun "Oliver" He.
23.07.2025 14:26 β π 3 π 0 π¬ 0 π 0
The #ismbeccb2025 CollaborationFest is starting 11:20. Come join us in room 2F near the coffee break lounge and hear all about our exciting projects! Thanks to @hmenager.bsky.social @dcgenomics.bsky.social @bosc.bsky.social
23.07.2025 10:08 β π 6 π 4 π¬ 0 π 0
Make Data Count - Finding Data References
Identify scientific data use in papers and classify how they are mentioned.
Quick shout out for the Make Data Count challenge to improve data citation from @gigascience.bsky.social's Scott Edmunds. Looks cool and π²prizes! #BOSC2025 #ISMBECCB2025 www.kaggle.com/competitions...
22.07.2025 16:32 β π 1 π 3 π¬ 0 π 0
Closing session at #BOSC2025, Guy Cochrane talking about the Global Biodata Infrastructure, hopefully framing things for the sustainability panel (which our EiC @scedmunds.bsky.social is participating in #ISMB2025 #ISMBECCB2025
22.07.2025 15:43 β π 6 π 5 π¬ 1 π 0
Thinking globally, Guy telling us the Global Biodata coalition, with 11 funders in the coalition and many more observing organisations #BOSC2025 #ISMBECCB2025
22.07.2025 15:48 β π 1 π 1 π¬ 1 π 0
Guy ending his talk telling the #BOSC2025 audience if they value global data infrastructure sign their open letter globalbiodata.org/open-letter-... #ISMBECCB2025
22.07.2025 15:53 β π 1 π 4 π¬ 0 π 0
Panelists on stage
Fantastic #BOSC2025 panel on data sustainability to cap off the conference. #ISMBECCB2025
22.07.2025 16:57 β π 20 π 5 π¬ 0 π 0
A fully open access, peer-reviewed journal published jointly by Oxford University Press and the International Society for Computational Biology.
Iranian-Scottish Londoner lost in the East, trying to get his head around scientific data and publishing
Science | Technology | Innovation | Biotech | #Genomics 𧬠| Global citizen π π¨π¦π¨π΄| Equity Diversity & Inclusion | #BreastCancer survivor and patient advocate πΊ
The leading provider of open source workflow orchestration software for data pipelines, cloud infrastructure & collaboration. From the creators of @nextflow.io
Empowering Computational Biology, Transforming Global Science!
The International Society for Computational Biology is a scholarly society for advancing understanding of living systems through computation, and communicating scientific advances worldwide.
Official account of the Bio-Ontologies and Knowledge Representation (BOKR) COSI, a community of the International Society for Computational Biology (ISCB).
Researcher & #Luddite interested in theory & practice of #peerproduction. Loves everything open π: #openscience #citizenscience #opensource & [β¦]
[bridged from https://scholar.social/@gedankenstuecke on the fediverse by https://fed.brid.gy/ ]
Iβm over on Mastodon at https://scholar.social/@gedankenstuecke where I post from mostly
You can follow my bridged Mastodon account at @gedankenstuecke.scholar.social.ap.brid.gy
LinkML is an open and extensible modeling framework for creating and validating computable, reusable, and interoperable data.
Documentation: https://linkml.io/linkml
Source code: https://github.com/linkml
The #OpenScience journal from BGI & OUP publishing articles using/generating large datasets. And linked to GigaDB #opendata hosting/analysis repository.
Website: http://gigasciencejournal.com
The International Society for Biocuration (ISB) is a non profit organization for biocurators, developers, and researchers with an interest in biocuration. The society promotes the field of biocuration and provides a forum for informatio
A leading life science journal that champions high-impact research across all disciplinesβfrom molecules to ecosystems. We offer innovative formats and collaborative editorial support to ensure your work achieves its full scientific impact.
Knowledge based biomedical data science, artificial intelligence for discovery in molecular biomedicine, computational bioethics, theory of mattering. University of Chicago / Big Island HI
Berkeley Lab, Environmental Genomics and Systems Biology division. #GeneOntology #MonarchInitiative #AllianceGenome #NationalMicrobimeDataCollaborative #OBOFoundry.
Bioinformatics π§¬π₯οΈπ§ͺ
#PLOS Comp Biol Education Sect. Editor;
#DATABASE OUP Associate Editor;
#OpenScience #OpenAccess #OpenData;
friend of @jxtxfoundation.bsky.social,
@abinstitute.bsky.social
- I am π¨π¦
γγγͺζιγ§γγγγΉγΏγθΉγ§γΎγ / Tazro Inutano Ohta, a Bioinformatics researcher