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Jonathan Kitt

@jonathankitt.bsky.social

🧬 Wheat genomics πŸ“Š Data analysis & visualisation πŸ–₯️ Computational biology https://jonathankitt.netlify.app/blog

176 Followers  |  216 Following  |  169 Posts  |  Joined: 13.11.2023  |  1.851

Latest posts by jonathankitt.bsky.social on Bluesky

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#rstats filter_out is good

10.02.2026 18:35 β€” πŸ‘ 29    πŸ” 8    πŸ’¬ 1    πŸ“Œ 0
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`dplyr::if_else()` and `dplyr::case_when()` are up to 30x faster dplyr 1.2.0 comes with much faster and more memory efficient `if_else()` and `case_when()` functions!

Last week we released dplyr 1.2.0, but we left off something VERY important πŸ™‚

`dplyr::if_else()` and `dplyr::case_when()` are now up to 30x faster and use 10x less memory!

We dive into how we achieved these numbers in this new #rstats post!

tidyverse.org/blog/2026/02...

10.02.2026 13:03 β€” πŸ‘ 127    πŸ” 21    πŸ’¬ 4    πŸ“Œ 1

Looks great @emilhvitfeldt.bsky.social ! Working on new tutorials at the moment, will have to try those out !

05.02.2026 20:52 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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#TidyTuesday week 05, exploring the Edible Plants Database.
Code available here: github.com/KittJonathan...
#RStats #Plants #Datavis #Code

03.02.2026 12:52 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Very nice!

02.02.2026 13:42 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
12Γ¨mes Rencontres R - Sciencesconf.org 12Γ¨mes Rencontres R Γ  Nantes du 16 au 18 Juin 2026

Inscription faite ! HÒte de participer à ces #RencontresR pour la toute première fois. Il ne me reste plus qu'à soumettre un résumé ☺️
rr2026.sciencesconf.org
#RStats #code #conf

28.01.2026 10:42 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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Home Learn R, R tutorials, R resources, blog posts and the latest updates about the statistical programming R language.

This week's Rweekly issue is out!
#RStats
rweekly.org

26.01.2026 07:24 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Handling large data with R and Python

#rstats I've given a workshop a few days ago on handling large data (think tens to hundreds of millions of rows) with Polars in Python and in R.

Here are my introductory slides: brussels-large-data-r-python.etiennebacher.com

And the associated repo: github.com/etiennebache...

20.01.2026 09:07 β€” πŸ‘ 19    πŸ” 7    πŸ’¬ 1    πŸ“Œ 0
tidytuesday/2026/tt_2026_03.R at main Β· KittJonathan/tidytuesday Repo for the #tidytuesday weekly challenge. Contribute to KittJonathan/tidytuesday development by creating an account on GitHub.

Code: github.com/KittJonathan...

20.01.2026 08:02 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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#TidyTuesday Week 03 of 2026 - Astronomy Picture of the Day
#Rstats #dataviz #planets

20.01.2026 08:02 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Most spoken language families for the 24 countries taking part in the 2025 African Cup of Nations.
Code available here: github.com/KittJonathan...
#TidyTuesday #RStats #CAN #CAF #football

13.01.2026 13:56 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Just started reading the course materials from @physaliacourses.bsky.social on Genomic data (github.com/loukesio/dat...) by @bioinformatician.bsky.social, and already learned a couple valuable #tidyverse tricks!
- how to use "names_pattern" in pivot_longer()
- change labels using labeller()
#RStats

08.01.2026 15:55 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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First #tidytuesday for 2026! Decided to re-create my #github contributions heatmap for 2025.
Code available here: github.com/KittJonathan...
#Rstats #datavis #code

06.01.2026 09:28 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

πŸŽ‰

05.01.2026 18:49 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Hi #rstats friends! πŸ‘‹πŸ½

Checkout our newest blog that displays how to create beautiful and reproducible river maps! πŸ—Ί

πŸ”—: waterdata.usgs.gov/blog/nhd-viz...

#nhdplusTools #dataRetrieval #ggplot #dataviz

03.12.2025 17:47 β€” πŸ‘ 13    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
Automated Reporting of Results and Statistical Models The aim of the report package is to bridge the gap between R’s output and the formatted results contained in your manuscript. This package converts statistical models and data frames into textual repo...

{report} #rstats package version 0.6.2 is now on CRAN!

MANY bug fixes in this version! Including corrected duplicated text outputs and dramatic speed increases for brmsfit models (which used to refit the model entirely every time).

easystats.github.io/report/

With the @easystats.github.io team

08.11.2025 23:06 β€” πŸ‘ 13    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
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Home Learn R, R tutorials, R resources, blog posts and the latest updates about the statistical programming R language.

The latest #Rweekly issue is out !
rweekly.org
#Rstats #news

10.11.2025 09:02 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Wrote up a little intervention post/explanation for my class about why using LLMs for trying to learn programming (as first time learners!) is bad and detrimental datavizf25.classes.andrewheiss.com/news/2025-11...

02.11.2025 22:17 β€” πŸ‘ 179    πŸ” 52    πŸ’¬ 4    πŸ“Œ 7
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Weekly Recap (Nov 7, 2025) LLMs for learning to code, R updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance

What's new this week in AI, data science, bioinfo: LLMs for learning to code, #Rstats updates (R Data Scientist, R Weekly), RAG, layoffs & AI, DuckDB for data science, Anthropic+Iceland, AI in science, AI in drug discovery, Nextflow & pathogen surveillance doi.org/10.59350/28g...

07.11.2025 14:04 β€” πŸ‘ 5    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0
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What AI chatbots are actually doing under the hood How AI chatbots like ChatGPT work under the hood -- the post I wish I’d found before starting 'Build a Large Language Model (from Scratch)'.

Part 1: "What AI chatbots are actually doing under the hood".

www.gilesthomas.com/2025/08/what...

29.08.2025 19:05 β€” πŸ‘ 1    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Doesn't look like ggplot2 to me :-) Well done!

08.10.2025 20:21 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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It’s happening again in November. 30 days and 30 themes for maps. Take part, learn something new and have fun. That’s what #30DayMapChallenge is about 🌎

01.10.2025 16:15 β€” πŸ‘ 52    πŸ” 23    πŸ’¬ 1    πŸ“Œ 8
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Le monde de l'infiniment petit.

25.09.2025 11:55 β€” πŸ‘ 574    πŸ” 97    πŸ’¬ 7    πŸ“Œ 1
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I'm in the middle of preparing slides for an "Introduction to R" course. Thought I'd use a figure to explain element recycling in vectorized operations.
#RStats #course #learn

26.09.2025 11:54 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Screenshot of first page of slidecrafting-book.com website

Screenshot of first page of slidecrafting-book.com website

I'm exited to announce a new resource about making slides with quarto and revealjs. This book is the combination of all the work I have done in this area, reordered and polished up

There isn't a lot of new information yet, but this format allows me to add more easily

slidecrafting-book.com
#quarto

24.09.2025 16:12 β€” πŸ‘ 183    πŸ” 66    πŸ’¬ 11    πŸ“Œ 6
Original post on fosstodon.org

The latest issue of @rweekly is now live!

https://rweekly.org/2025-W39.html

This week's highlights:
✏️ All the Ways to Programmatically Edit or Parse R Markdown / Quarto Documents by @rOpenSci
πŸˆ‚οΈ I Vibe Coded an R Package by @jonocarroll
β˜‘οΈ Quality Control for Scanned Multiple-Choice Exams by […]

22.09.2025 00:17 β€” πŸ‘ 16    πŸ” 10    πŸ’¬ 0    πŸ“Œ 0

You're probably already aware of this, but there's the "Rencontres R 2026" conference in Belgium from May 19th to 21st

19.09.2025 06:42 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Home Learn R, R tutorials, R resources, blog posts and the latest updates about the statistical programming R language.

Rweekly issue #38 is out.
This week's highlights include: R6 interfaces (@jakub-sobolewski.bsky.social) and ggplot2 (@nrennie.bsky.social)
#Rstats #code #reading
rweekly.org

15.09.2025 07:48 β€” πŸ‘ 5    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Oops sorry

15.09.2025 07:46 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Get started with Quarto | Mine Γ‡etinkaya-Rundel
YouTube video by Posit PBC Get started with Quarto | Mine Γ‡etinkaya-Rundel

Not really about transitioning from RMd to Quarto, but this video by @minecr.bsky.social helped me start using Quarto
youtu.be/_f3latmOhew?...

05.09.2025 20:57 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

@jonathankitt is following 20 prominent accounts