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Carsen Stringer

@computingnature.bsky.social

group leader @ HHMIJanelia, #neuroscience + AI πŸ”¬ #cellpose | diversity and open-science for better science | β“‹ | she/her | https://mouseland.github.io

3,165 Followers  |  2,549 Following  |  32 Posts  |  Joined: 12.11.2024  |  1.7366

Latest posts by computingnature.bsky.social on Bluesky

Viral labeling of projection neurons in the mouse brain with green fluorescence protein

Viral labeling of projection neurons in the mouse brain with green fluorescence protein

For #FluorescenceFriday - experiment was apparently a stereotaxic injection "miss", but resulted in a lovely image nevertheless. Credit to @rphillips3.bsky.social and JHU undergrad Natalia Gonzalez-Perez πŸ§ πŸ”¬πŸ§ͺ

12.12.2025 13:17 β€” πŸ‘ 44    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
Fluorescent microscopy image showing bright red neurons

Fluorescent microscopy image showing bright red neurons

Some #FluorescenceFriday content for you - check out these anterior cingulate cortex neurons that project to the superior colliculus. Image by @izzabellagreen.bsky.social 🧠

12.12.2025 17:20 β€” πŸ‘ 48    πŸ” 5    πŸ’¬ 1    πŸ“Œ 0
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A favorite recent image of some busy microglia, lovingly named the Rat King (yellow CD68, pink Iba1, blue DAPI) for my first #FluorescenceFriday

12.12.2025 14:38 β€” πŸ‘ 42    πŸ” 7    πŸ’¬ 2    πŸ“Œ 1
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A glittery, festive #FluorescenceFriday today, spent playing with some fun samples πŸͺ©πŸ•Ί

12.12.2025 15:32 β€” πŸ‘ 54    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0
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Dimensionality reduction may be the wrong approach to understanding neural representations. Our new paper shows that across human visual cortex, dimensionality is unbounded and scales with dataset sizeβ€”we show this across nearly four orders of magnitude. journals.plos.org/ploscompbiol...

11.12.2025 15:32 β€” πŸ‘ 222    πŸ” 64    πŸ’¬ 7    πŸ“Œ 9
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Amazing talk by my dear colleague and friend @albertdm.bsky.social and his supervisor @maweigert.bsky.social showing the cool things you can do with Spotiflow at #CBIAS2025. Look at this beautiful learned spot detection in 3D! πŸ‘©πŸ»β€πŸ’»πŸ‘©πŸ»β€πŸ’»πŸ”¬ #bioimageanalysis #spotdetection

24.11.2025 11:31 β€” πŸ‘ 23    πŸ” 3    πŸ’¬ 1    πŸ“Œ 1

#SfN2025 Qingqing is presenting this work on spatial predictive coding NOW at poster Q9!

19.11.2025 22:53 β€” πŸ‘ 7    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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#sfn2025 interested in how eye movements πŸ‘€ versus orofacial movements influence 🐭 visual cortex activity 🧠? Check out poster R8 by @atika-syeda.bsky.social NOW!

19.11.2025 19:16 β€” πŸ‘ 22    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Still at SfN on the last day? During the morning session on the 19th, 8:00AM - 12:00PM, come check out our posters from the Moser, Zong, and Gonzalo Cogno groups in row QQ ('Grid cells and spatially modulated cells'). Ephys, imaging, remapping, development, sweeps and more! 🧠
Detailed thread below πŸ‘‡

18.11.2025 22:31 β€” πŸ‘ 30    πŸ” 11    πŸ’¬ 1    πŸ“Œ 5
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Happening now! Come see Jorge Ramirez present our recent work showing that Purkinje cell nonlinear mixed selectivity facilitates flexible readouts of locomotor coordination 🐭 πŸ§ πŸšΆβ€β™‚οΈ #SfN25 Board W6

18.11.2025 21:23 β€” πŸ‘ 9    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Watching this literal magic tech take shape has been one of my favorite parts of being in this group - a plausible path to real actual naturalistic life-scale experiments.
#SfN2025

16.11.2025 18:04 β€” πŸ‘ 13    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

Good morning #SfN. Want to chat about chronic Neuropixels or tracking? Find me today at the #Neuropixels booth (3731) from 11 to 12! And if you're still around tomorrow afternoon, come talk about distributed coding in navigation at my poster tomorrow afternoon (RR16).

18.11.2025 15:18 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Small watercolor science inspired paintings

Small watercolor science inspired paintings

Amazingly, I still have some itty bitty paintings left on day four. Come find me in the sails Pavilion at #sfn today until 4:00

18.11.2025 18:50 β€” πŸ‘ 21    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
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#SfN #SocietyForGlia
STARTING NOW!

Ending strong with the last www.liddelowlab.com presentations of the week.

@pryprk.bsky.social
talking about a world first mouse model for XDP... and OLIGODENDROCYTES!

@melcooperphd.bsky.social
presenting on astrocyte networks in the mouse forebrain.

18.11.2025 20:58 β€” πŸ‘ 11    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
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#sfn2025 posters 4 and 5 today: our collaborator Nitsan Goldstein shares some of our work on suppression of pain in PBN with Nick Betley, and grad student Ryan Lu shares his work modeling swim dynamics in the jellyfish nervous system with Brady Weissbourd

18.11.2025 14:32 β€” πŸ‘ 5    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Claudia and Zeena posters are today! DD16 in the morning and HH2 in the afternoon #SfN2025 #SfN

18.11.2025 14:28 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
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presenting TODAY at #SfN2025 🧠
if you're curious about distinct structure learning & metacognitive dynamics across multiple statistical patterns & stimuli types, come check out my poster w/
@meganakpeters.bsky.social πŸ“ˆ
πŸ“PSTR363.17 / UU13
πŸ• Tues Nov 18 1-5 PM
www.abstractsonline.com/pp8/#!/21171...

18.11.2025 17:41 β€” πŸ‘ 24    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0

At #sfn2025? Check out 2 posters this afternoon from our lab: David Jin at D9 and Elam Cutts at LBP100.

18.11.2025 19:04 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

#SfN2025 Poster 4 of 6
TODAY! Tuesday 11/18 1-5p
@hazimi.bsky.social
PSTR363.09 / UU5 Modeling Prior-like Higher-Order Representations in DecNef with a Generative NERD Model
www.abstractsonline....

18.11.2025 19:08 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

Posters are up now for another hour and a couple more tomorrow! #SfN25 #SfN2025 @sfn.org

17.11.2025 19:04 β€” πŸ‘ 16    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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Journal of Undergraduate Neuroscience Education, Editor-in-Chief, now reporting for duty. 🫑

Catch me at the Faculty for Undergraduate Neuroscience Booth (3928) today and tomorrow from 2-3 pm if you want to chat about your manuscript or what JUNE is up to.

#SfN2025 #SfN25 @sfn.org

17.11.2025 18:14 β€” πŸ‘ 62    πŸ” 9    πŸ’¬ 3    πŸ“Œ 0
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To study how animals understand the physical world (and the rules that govern its dynamics), @jinyao-y.bsky.social trains rats to play fetch with robots πŸ€πŸ€–πŸŽΎ

To learn more, come to our poster Tuesday morning!
[Board W11] Rats learn and use intuitive physics knowledge to solve fetch tasks.
#SfN2025

18.11.2025 01:16 β€” πŸ‘ 69    πŸ” 20    πŸ’¬ 0    πŸ“Œ 0
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πŸ“’ Apply now for the first DL@Janelia Bootcamp (June 4–18, 2026)! 2 weeks of hands-on deep learning for microscopy: train models on your own data, Python needed (no ML experience), housing + meals included, no registration fee

πŸ“ Janelia Research Campus, VA
πŸ—“οΈ Apply by Jan 15, 2026
πŸ”— shorturl.at/j4sgY

06.11.2025 18:56 β€” πŸ‘ 15    πŸ” 7    πŸ’¬ 0    πŸ“Œ 3
Snapshot of poster conclusions.

Snapshot of poster conclusions.

Friends at #SFN25: Want to know more about how seeing is transformed into familiarity? Check out Simon Bohn's poster this afternoon (Board P9; PSTR224.03).

There, he'll tell you about a pardox and its resolution - along with a previously undescribed computation in the medial temporal lobe.

17.11.2025 14:42 β€” πŸ‘ 8    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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We ate well last night (in a tent, indoors, with s'mores for dessert), and are energized to talk science today at #SfN2025. Come visit our posters:
AA14 this morning
Y11, GG13, HH11 this afternoon

17.11.2025 13:42 β€” πŸ‘ 12    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

#SfN2025 Poster 1 of 6
Today, Saturday 11/15 1-5p
@emilwolsson.bsky.social
PSTR039.14 / BB1 A Pilot Study of Computationally-Informed fMRI Decoded Neurofeedback for Modulating Metacognitive Neural Signatures
www.abstractsonline....

15.11.2025 18:44 β€” πŸ‘ 9    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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LLMs get a lot of attention but if you are interested in the original (allegedly) stochastic parrots come to my poster Tuesday where I will present new work on the natural vocal behavior or parrots and its cortical control #Sfn2025 #SfN25

15.11.2025 18:59 β€” πŸ‘ 63    πŸ” 18    πŸ’¬ 4    πŸ“Œ 0
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So excited to present my poster about effects of Vagus Nerve Stimulation on post-stroke cortical activity 🧠⚑Find me at PSTR332.08 next Tue, Nov 18 PM at #SfN2025.
#Neuroskyence

15.11.2025 19:09 β€” πŸ‘ 10    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

are you a @neuromatch.bsky.social student, TA, mentor, impact scholar, ambassador, volunteer at #SfN #SfN2025 #SfN25--or you're here & just want to say hi? come by our booth, meet some of the team, meet each other!

& look out for other neuromatchers across SfN... there are literally 1000s of us!

15.11.2025 16:36 β€” πŸ‘ 7    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

Massive FOMo seeing the posts of people heading to #SfN2025, all that beach...ehm.. science I’m missing 😭

If you’re there, go say hi to the brilliant Bruno Pilcher and the INSS crew, who just built my lab a custom multiphoton microscope with a spatial light modulator that is pure chef’s kiss πŸ‘¨β€πŸ³πŸ’‹βœ¨

15.11.2025 14:00 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

@computingnature is following 20 prominent accounts